RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 HIST1H2BOP23527 126 aa13.57□□□□□ -0.24
PABPN1-207ENST00000556821 HIST1H2BBP33778 126 aa13.57□□□□□ -0.24
PABPN1-207ENST00000556821 HIST1H2BDP58876 126 aa13.57□□□□□ -0.24
PABPN1-207ENST00000556821 HIST1H2BCP62807 126 aa13.57□□□□□ -0.24
PABPN1-207ENST00000556821 HIST2H2BEQ16778 126 aa13.57□□□□□ -0.24
PABPN1-207ENST00000556821 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.57□□□□□ -0.24
PABPN1-207ENST00000556821 HIST1H2BHQ93079 126 aa13.57□□□□□ -0.24
PABPN1-207ENST00000556821 HIST1H2BNQ99877 126 aa13.57□□□□□ -0.24
PABPN1-207ENST00000556821 HIST1H2BMQ99879 126 aa13.57□□□□□ -0.24
PABPN1-207ENST00000556821 A0A0U1RRA0 63 aa13.56□□□□□ -0.24
PABPN1-207ENST00000556821 LINC00158P58513 81 aa13.56□□□□□ -0.24
PABPN1-207ENST00000556821 TSPEAR-AS2P59090 65 aa13.56□□□□□ -0.24
PABPN1-207ENST00000556821 IGKV2-28A0A075B6P5 120 aa13.55□□□□□ -0.24
PABPN1-207ENST00000556821 IGKV2D-28P01615 120 aa13.55□□□□□ -0.24
PABPN1-207ENST00000556821 PMCHL2Q9BQD1 86 aa13.55□□□□□ -0.24
PABPN1-207ENST00000556821 SMIM13P0DJ93 91 aa13.54□□□□□ -0.24
PABPN1-207ENST00000556821 PLNP26678 52 aa13.54□□□□□ -0.24
PABPN1-207ENST00000556821 RPL24P83731 157 aaKnown RBP13.54□□□□□ -0.24
PABPN1-207ENST00000556821 KRTAP13-1Q8IUC0 172 aa13.54□□□□□ -0.24
PABPN1-207ENST00000556821 NDUFA12Q9UI09 145 aa13.54□□□□□ -0.24
PABPN1-207ENST00000556821 IGLV1-50A0A075B6I6 118 aa13.53□□□□□ -0.24
PABPN1-207ENST00000556821 RPL28P46779 137 aaKnown RBP13.53□□□□□ -0.24
PABPN1-207ENST00000556821 DPM2O94777 84 aa13.52□□□□□ -0.25
PABPN1-207ENST00000556821 HERV-K104P63124 156 aa13.52□□□□□ -0.25
PABPN1-207ENST00000556821 MEIG1Q5JSS6 88 aa13.51□□□□□ -0.25
PABPN1-207ENST00000556821 LEPROTO15243 131 aa13.5□□□□□ -0.25
PABPN1-207ENST00000556821 TMEM238C9JI98 176 aa13.49□□□□□ -0.25
PABPN1-207ENST00000556821 IGKCP01834 107 aa13.49□□□□□ -0.25
PABPN1-207ENST00000556821 MIR7-3HGQ8N6C7 128 aa13.49□□□□□ -0.25
PABPN1-207ENST00000556821 MAP1LC3CQ9BXW4 147 aa13.49□□□□□ -0.25
PABPN1-207ENST00000556821 MYMXA0A1B0GTQ4 84 aa13.48□□□□□ -0.25
PABPN1-207ENST00000556821 PLEKHB2Q96CS7 222 aa13.48□□□□□ -0.25
PABPN1-207ENST00000556821 TMEM126AQ9H061 195 aa13.48□□□□□ -0.25
PABPN1-207ENST00000556821 KRTAP9-6A0A140TA67 174 aa13.47□□□□□ -0.25
PABPN1-207ENST00000556821 J3QQQ9 107 aa13.46□□□□□ -0.25
PABPN1-207ENST00000556821 M0R378 163 aa13.46□□□□□ -0.25
PABPN1-207ENST00000556821 UBE2AP49459 152 aa13.46□□□□□ -0.25
PABPN1-207ENST00000556821 PRLHP81277 87 aa13.45□□□□□ -0.26
PABPN1-207ENST00000556821 SYS1-DBNDD2H3BUS1 97 aa13.44□□□□□ -0.26
PABPN1-207ENST00000556821 ATP6V1G1O75348 118 aa13.44□□□□□ -0.26
PABPN1-207ENST00000556821 RPL13AP40429 203 aaKnown RBP13.44□□□□□ -0.26
PABPN1-207ENST00000556821 HERVK_113P61574 105 aa13.44□□□□□ -0.26
PABPN1-207ENST00000556821 BOD1L2Q8IYS8 172 aa13.44□□□□□ -0.26
PABPN1-207ENST00000556821 LINC00587B1AMM8 73 aa13.43□□□□□ -0.26
PABPN1-207ENST00000556821 LPAP08519 4548 aa13.42□□□□□ -0.26
PABPN1-207ENST00000556821 A0A087X002 238 aa13.42□□□□□ -0.26
PABPN1-207ENST00000556821 FAM19A1Q7Z5A9 133 aa13.42□□□□□ -0.26
PABPN1-207ENST00000556821 COA6Q5JTJ3 125 aaKnown RBP13.41□□□□□ -0.26
PABPN1-207ENST00000556821 DAND5Q8N907 189 aa13.41□□□□□ -0.26
PABPN1-207ENST00000556821 LGALS3P17931 250 aaKnown RBP13.4□□□□□ -0.26
PABPN1-207ENST00000556821 NMUP48645 174 aa13.4□□□□□ -0.26
PABPN1-207ENST00000556821 NCR3O14931 201 aa13.39□□□□□ -0.27
PABPN1-207ENST00000556821 LINC01545Q5VT33 79 aa13.39□□□□□ -0.27
PABPN1-207ENST00000556821 LOC107984156A0A0G2JMH3 177 aa13.38□□□□□ -0.27
PABPN1-207ENST00000556821 E9PLD3 99 aa13.38□□□□□ -0.27
PABPN1-207ENST00000556821 ARL17AQ8IVW1 177 aa13.38□□□□□ -0.27
PABPN1-207ENST00000556821 ANAPC11Q9NYG5 84 aa13.37□□□□□ -0.27
PABPN1-207ENST00000556821 IGKV2D-26A0A0A0MRZ7 120 aa13.36□□□□□ -0.27
PABPN1-207ENST00000556821 MUC2Q02817 5179 aa13.36□□□□□ -0.27
PABPN1-207ENST00000556821 FAT4Q6V0I7 4981 aa13.35□□□□□ -0.27
PABPN1-207ENST00000556821 PET117Q6UWS5 81 aa13.35□□□□□ -0.27
PABPN1-207ENST00000556821 PRYO14603 147 aa13.34□□□□□ -0.27
PABPN1-207ENST00000556821 C3orf79P0CE67 100 aa13.34□□□□□ -0.27
PABPN1-207ENST00000556821 CRYGAP11844 174 aa13.34□□□□□ -0.27
PABPN1-207ENST00000556821 A0A0J9YXY3 114 aa13.32□□□□□ -0.28
PABPN1-207ENST00000556821 TRBV10-3A0A0K0K1G6 114 aa13.32□□□□□ -0.28
PABPN1-207ENST00000556821 SPRR1AP35321 89 aa13.32□□□□□ -0.28
PABPN1-207ENST00000556821 KRTAP13-2Q52LG2 175 aa13.32□□□□□ -0.28
PABPN1-207ENST00000556821 KCNQ1DNQ9H478 68 aa13.32□□□□□ -0.28
PABPN1-207ENST00000556821 FAM229BQ4G0N7 80 aa13.31□□□□□ -0.28
PABPN1-207ENST00000556821 KRTAP4-16G5E9R7 235 aaPredicted RBP13.3□□□□□ -0.28
PABPN1-207ENST00000556821 EIF4EBP3O60516 100 aaPredicted RBP13.3□□□□□ -0.28
PABPN1-207ENST00000556821 ADAMTSL4-AS1Q5T5F5 129 aa13.3□□□□□ -0.28
PABPN1-207ENST00000556821 SOSTDC1Q6X4U4 206 aa13.3□□□□□ -0.28
PABPN1-207ENST00000556821 HIGD2AQ9BW72 106 aa13.3□□□□□ -0.28
PABPN1-207ENST00000556821 LINC00337Q8N6G1 96 aa13.29□□□□□ -0.28
PABPN1-207ENST00000556821 TYMSOSQ8TAI1 123 aa13.29□□□□□ -0.28
PABPN1-207ENST00000556821 TRBV10-2A0A0K0K1G8 114 aa13.27□□□□□ -0.29
PABPN1-207ENST00000556821 KRTDAPP60985 99 aa13.27□□□□□ -0.29
PABPN1-207ENST00000556821 MIEN1Q9BRT3 115 aa13.27□□□□□ -0.29
PABPN1-207ENST00000556821 NPC2P61916 151 aa13.26□□□□□ -0.29
PABPN1-207ENST00000556821 LITAFQ99732 161 aa13.26□□□□□ -0.29
PABPN1-207ENST00000556821 NDUFC2O95298 119 aa13.25□□□□□ -0.29
PABPN1-207ENST00000556821 SPANXB1Q9NS25 103 aaPredicted RBP13.25□□□□□ -0.29
PABPN1-207ENST00000556821 TTTY13Q9BZ97 58 aa13.24□□□□□ -0.29
PABPN1-207ENST00000556821 DDTP30046 118 aa13.23□□□□□ -0.29
PABPN1-207ENST00000556821 SPRR4Q96PI1 79 aa13.22□□□□□ -0.29
PABPN1-207ENST00000556821 ETDCA0A1B0GVM5 59 aa13.21□□□□□ -0.29
PABPN1-207ENST00000556821 TSPAN13O95857 204 aa13.21□□□□□ -0.29
PABPN1-207ENST00000556821 IGLV6-57P01721 117 aa13.21□□□□□ -0.29
PABPN1-207ENST00000556821 ZNF815PA8K554 130 aa13.2□□□□□ -0.3
PABPN1-207ENST00000556821 S100A1P23297 94 aa13.2□□□□□ -0.3
PABPN1-207ENST00000556821 LCE2AQ5TA79 106 aaPredicted RBP13.2□□□□□ -0.3
PABPN1-207ENST00000556821 SMCR5Q8TEV8 140 aa13.2□□□□□ -0.3
PABPN1-207ENST00000556821 B5MCH6 92 aa13.19□□□□□ -0.3
PABPN1-207ENST00000556821 TIMM17BO60830 172 aa13.19□□□□□ -0.3
PABPN1-207ENST00000556821 C3orf22Q8N5N4 141 aa13.18□□□□□ -0.3
PABPN1-207ENST00000556821 LINC00308Q8TCZ7 52 aa13.18□□□□□ -0.3
PABPN1-207ENST00000556821 S100A12P80511 92 aa13.17□□□□□ -0.3
PABPN1-207ENST00000556821 ANKRD39Q53RE8 183 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 245.1 ms