RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 HIST1H4GQ99525 98 aa6.74□□□□□ -1.33
SHMT2-215ENST00000554656 SPANXDQ9BXN6 97 aa6.74□□□□□ -1.33
SHMT2-215ENST00000554656 PPDPFQ9H3Y8 114 aa6.74□□□□□ -1.33
SHMT2-215ENST00000554656 SPANXCQ9NY87 97 aa6.74□□□□□ -1.33
SHMT2-215ENST00000554656 A6NDN8 102 aa6.73□□□□□ -1.33
SHMT2-215ENST00000554656 F8WDY8 70 aa6.73□□□□□ -1.33
SHMT2-215ENST00000554656 PRSS2P07478 247 aa6.73□□□□□ -1.33
SHMT2-215ENST00000554656 IFITM1P13164 125 aa6.73□□□□□ -1.33
SHMT2-215ENST00000554656 SRSF9Q13242 221 aaKnown RBP eCLIP6.73□□□□□ -1.33
SHMT2-215ENST00000554656 PLA2G2DQ9UNK4 145 aa6.73□□□□□ -1.33
SHMT2-215ENST00000554656 TMEM238LA0A1B0GVL6 79 aa6.72□□□□□ -1.33
SHMT2-215ENST00000554656 A6NJY4 79 aa6.72□□□□□ -1.33
SHMT2-215ENST00000554656 PTTG1IPP53801 180 aa6.72□□□□□ -1.33
SHMT2-215ENST00000554656 CNBPP62633 177 aaKnown RBP6.72□□□□□ -1.33
SHMT2-215ENST00000554656 KIAA0087Q14695 138 aa6.72□□□□□ -1.33
SHMT2-215ENST00000554656 C6orf226Q5I0X4 101 aa6.72□□□□□ -1.33
SHMT2-215ENST00000554656 CFAP161Q6P656 301 aa6.72□□□□□ -1.33
SHMT2-215ENST00000554656 COPS9Q8WXC6 57 aa6.72□□□□□ -1.33
SHMT2-215ENST00000554656 LITAFQ99732 161 aa6.72□□□□□ -1.33
SHMT2-215ENST00000554656 TOMM7Q9P0U1 55 aa6.72□□□□□ -1.33
SHMT2-215ENST00000554656 UBR4Q5T4S7 5183 aa6.71□□□□□ -1.34
SHMT2-215ENST00000554656 CHTF8P0CG12 524 aa6.71□□□□□ -1.34
SHMT2-215ENST00000554656 BATFQ16520 125 aa6.71□□□□□ -1.34
SHMT2-215ENST00000554656 FXYD2P54710 66 aa6.7□□□□□ -1.34
SHMT2-215ENST00000554656 CKS1BP61024 79 aa6.7□□□□□ -1.34
SHMT2-215ENST00000554656 MEIG1Q5JSS6 88 aa6.7□□□□□ -1.34
SHMT2-215ENST00000554656 A0A1B0GWB2 263 aa6.69□□□□□ -1.34
SHMT2-215ENST00000554656 RPL24P83731 157 aaKnown RBP6.69□□□□□ -1.34
SHMT2-215ENST00000554656 SPAG11BQ08648 103 aa6.69□□□□□ -1.34
SHMT2-215ENST00000554656 COX17Q14061 63 aa6.69□□□□□ -1.34
SHMT2-215ENST00000554656 C15orf56Q8N910 161 aa6.69□□□□□ -1.34
SHMT2-215ENST00000554656 SPACA4Q8TDM5 124 aa6.69□□□□□ -1.34
SHMT2-215ENST00000554656 C2orf48Q96LS8 159 aa6.69□□□□□ -1.34
SHMT2-215ENST00000554656 A0A087WYN8 130 aa6.68□□□□□ -1.34
SHMT2-215ENST00000554656 GVQW2A0A096LPI5 108 aaPredicted RBP6.68□□□□□ -1.34
SHMT2-215ENST00000554656 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.68□□□□□ -1.34
SHMT2-215ENST00000554656 SMIM13P0DJ93 91 aa6.67□□□□□ -1.34
SHMT2-215ENST00000554656 ADAMTSL4-AS1Q5T5F5 129 aa6.67□□□□□ -1.34
SHMT2-215ENST00000554656 Q6ZRU5 148 aa6.67□□□□□ -1.34
SHMT2-215ENST00000554656 PLAC8Q9NZF1 115 aa6.67□□□□□ -1.34
SHMT2-215ENST00000554656 ERG28Q9UKR5 140 aa6.67□□□□□ -1.34
SHMT2-215ENST00000554656 TRBV30A0A0K0K1B3 111 aa6.66□□□□□ -1.34
SHMT2-215ENST00000554656 ZNF561-AS1K7EIQ3 104 aa6.66□□□□□ -1.34
SHMT2-215ENST00000554656 MUSTN1Q8IVN3 82 aa6.66□□□□□ -1.34
SHMT2-215ENST00000554656 A0A0B4J2C4 111 aa6.65□□□□□ -1.34
SHMT2-215ENST00000554656 TAX1BP3O14907 124 aa6.65□□□□□ -1.34
SHMT2-215ENST00000554656 HIGD2BQ4VC39 106 aa6.65□□□□□ -1.34
SHMT2-215ENST00000554656 LINC00308Q8TCZ7 52 aa6.65□□□□□ -1.34
SHMT2-215ENST00000554656 NHP2Q9NX24 153 aaKnown RBP6.65□□□□□ -1.34
SHMT2-215ENST00000554656 TNXBP22105 4242 aa6.64□□□□□ -1.35
SHMT2-215ENST00000554656 LOC107984156A0A0G2JMH3 177 aa6.64□□□□□ -1.35
SHMT2-215ENST00000554656 A4D1N5 150 aa6.64□□□□□ -1.35
SHMT2-215ENST00000554656 LINC00158P58513 81 aa6.64□□□□□ -1.35
SHMT2-215ENST00000554656 C2orf82Q6UX34 121 aa6.64□□□□□ -1.35
SHMT2-215ENST00000554656 ARL17AQ8IVW1 177 aa6.64□□□□□ -1.35
SHMT2-215ENST00000554656 RNF151Q2KHN1 245 aa6.63□□□□□ -1.35
SHMT2-215ENST00000554656 MIR7-3HGQ8N6C7 128 aa6.63□□□□□ -1.35
SHMT2-215ENST00000554656 C9orf118A6NHY6 69 aa6.62□□□□□ -1.35
SHMT2-215ENST00000554656 CFC1BP0CG36 223 aa6.62□□□□□ -1.35
SHMT2-215ENST00000554656 CFC1P0CG37 223 aa6.62□□□□□ -1.35
SHMT2-215ENST00000554656 UNQ6190/PRO20217Q6UXQ8 127 aa6.62□□□□□ -1.35
SHMT2-215ENST00000554656 DPH3Q96FX2 82 aa6.62□□□□□ -1.35
SHMT2-215ENST00000554656 CAMK2N2Q96S95 79 aa6.62□□□□□ -1.35
SHMT2-215ENST00000554656 A0A096LNI7 61 aa6.61□□□□□ -1.35
SHMT2-215ENST00000554656 IGKV2-24A0A0C4DH68 120 aa6.61□□□□□ -1.35
SHMT2-215ENST00000554656 A0A0U1RRA0 63 aa6.61□□□□□ -1.35
SHMT2-215ENST00000554656 PFN2P35080 140 aa6.61□□□□□ -1.35
SHMT2-215ENST00000554656 PRR3P79522 188 aaKnown RBP6.61□□□□□ -1.35
SHMT2-215ENST00000554656 SOSTDC1Q6X4U4 206 aa6.61□□□□□ -1.35
SHMT2-215ENST00000554656 DAND5Q8N907 189 aa6.61□□□□□ -1.35
SHMT2-215ENST00000554656 C6orf48Q9UBA6 75 aa6.61□□□□□ -1.35
SHMT2-215ENST00000554656 PRO1854Q9UHT4 67 aa6.61□□□□□ -1.35
SHMT2-215ENST00000554656 SYCNQ0VAF6 134 aa6.6□□□□□ -1.35
SHMT2-215ENST00000554656 C10orf25Q5T742 122 aa6.6□□□□□ -1.35
SHMT2-215ENST00000554656 RAB37Q96AX2 223 aa6.6□□□□□ -1.35
SHMT2-215ENST00000554656 LINC00526Q96FQ7 95 aa6.6□□□□□ -1.35
SHMT2-215ENST00000554656 LRP2P98164 4655 aa6.59□□□□□ -1.35
SHMT2-215ENST00000554656 NDUFC2O95298 119 aa6.59□□□□□ -1.35
SHMT2-215ENST00000554656 TLX1NBP0CAT3 122 aa6.59□□□□□ -1.35
SHMT2-215ENST00000554656 C7orf33Q8WU49 177 aa6.59□□□□□ -1.35
SHMT2-215ENST00000554656 TRAV13-2A0A0B4J235 113 aa6.58□□□□□ -1.36
SHMT2-215ENST00000554656 A0A1B0GV90 55 aa6.58□□□□□ -1.36
SHMT2-215ENST00000554656 NDUFC2-KCTD14E9PQ53 114 aa6.58□□□□□ -1.36
SHMT2-215ENST00000554656 K7ERJ3 54 aa6.58□□□□□ -1.36
SHMT2-215ENST00000554656 NPC2P61916 151 aa6.58□□□□□ -1.36
SHMT2-215ENST00000554656 LYRM7Q5U5X0 104 aa6.58□□□□□ -1.36
SHMT2-215ENST00000554656 CARD19Q96LW7 228 aa6.58□□□□□ -1.36
SHMT2-215ENST00000554656 LINC01600Q96MT4 127 aa6.58□□□□□ -1.36
SHMT2-215ENST00000554656 SND1-IT1Q9HBX3 110 aa6.58□□□□□ -1.36
SHMT2-215ENST00000554656 EIF4EBP3O60516 100 aaPredicted RBP6.57□□□□□ -1.36
SHMT2-215ENST00000554656 C9orf116Q5BN46 136 aaPredicted RBP6.57□□□□□ -1.36
SHMT2-215ENST00000554656 A0A1W2PPM0 123 aa6.56□□□□□ -1.36
SHMT2-215ENST00000554656 H3BUT2 72 aa6.56□□□□□ -1.36
SHMT2-215ENST00000554656 TSPAN13O95857 204 aa6.56□□□□□ -1.36
SHMT2-215ENST00000554656 PKIGQ9Y2B9 76 aa6.56□□□□□ -1.36
SHMT2-215ENST00000554656 FABP2P12104 132 aa6.55□□□□□ -1.36
SHMT2-215ENST00000554656 TRBV10-2A0A0K0K1G8 114 aa6.54□□□□□ -1.36
SHMT2-215ENST00000554656 KRTAP10-8P60410 259 aa6.54□□□□□ -1.36
SHMT2-215ENST00000554656 IGKV2-28A0A075B6P5 120 aa6.53□□□□□ -1.36
SHMT2-215ENST00000554656 IGKV2D-28P01615 120 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms