RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 PFN2P35080 140 aa5.79□□□□□ -1.48
CHD8-206ENST00000553870 NMUP48645 174 aa5.79□□□□□ -1.48
CHD8-206ENST00000553870 AKR1D1P51857 326 aa5.79□□□□□ -1.48
CHD8-206ENST00000553870 LINC01545Q5VT33 79 aa5.79□□□□□ -1.48
CHD8-206ENST00000553870 FAM19A5Q7Z5A7 132 aaPredicted RBP5.79□□□□□ -1.48
CHD8-206ENST00000553870 KRTAP7-1Q8IUC3 87 aa5.79□□□□□ -1.48
CHD8-206ENST00000553870 C22orf24Q9Y442 160 aa5.79□□□□□ -1.48
CHD8-206ENST00000553870 IGLV5-37A0A075B6J1 123 aa5.78□□□□□ -1.48
CHD8-206ENST00000553870 KRTAP29-1A8MX34 341 aaPredicted RBP5.78□□□□□ -1.48
CHD8-206ENST00000553870 SPINK6Q6UWN8 80 aa5.78□□□□□ -1.48
CHD8-206ENST00000553870 NDUFA12Q9UI09 145 aa5.78□□□□□ -1.48
CHD8-206ENST00000553870 PSORS1C2Q9UIG4 136 aa5.78□□□□□ -1.48
CHD8-206ENST00000553870 J3QQQ9 107 aa5.77□□□□□ -1.49
CHD8-206ENST00000553870 C3orf79P0CE67 100 aa5.77□□□□□ -1.49
CHD8-206ENST00000553870 LINC00158P58513 81 aa5.77□□□□□ -1.49
CHD8-206ENST00000553870 UBE2BP63146 152 aa5.77□□□□□ -1.49
CHD8-206ENST00000553870 RPL24P83731 157 aaKnown RBP5.77□□□□□ -1.49
CHD8-206ENST00000553870 SRSF9Q13242 221 aaKnown RBP eCLIP5.77□□□□□ -1.49
CHD8-206ENST00000553870 SERTAD4-AS1Q5TG53 156 aa5.77□□□□□ -1.49
CHD8-206ENST00000553870 MRPL55Q7Z7F7 128 aaKnown RBP5.77□□□□□ -1.49
CHD8-206ENST00000553870 KRTAP19-1Q8IUB9 90 aa5.77□□□□□ -1.49
CHD8-206ENST00000553870 PMCHL2Q9BQD1 86 aa5.77□□□□□ -1.49
CHD8-206ENST00000553870 SND1-IT1Q9HBX3 110 aa5.77□□□□□ -1.49
CHD8-206ENST00000553870 FLG2Q5D862 2391 aaPredicted RBP5.77□□□□□ -1.49
CHD8-206ENST00000553870 C20orf202A1L168 122 aa5.76□□□□□ -1.49
CHD8-206ENST00000553870 E9PLD3 99 aa5.76□□□□□ -1.49
CHD8-206ENST00000553870 S100A6P06703 90 aa5.76□□□□□ -1.49
CHD8-206ENST00000553870 LGALS3P17931 250 aaKnown RBP5.76□□□□□ -1.49
CHD8-206ENST00000553870 HNRNPA3P51991 378 aaKnown RBP5.76□□□□□ -1.49
CHD8-206ENST00000553870 MEIG1Q5JSS6 88 aa5.76□□□□□ -1.49
CHD8-206ENST00000553870 C1orf137Q5JT78 98 aa5.76□□□□□ -1.49
CHD8-206ENST00000553870 S100A2P29034 98 aa5.75□□□□□ -1.49
CHD8-206ENST00000553870 KRTDAPP60985 99 aa5.75□□□□□ -1.49
CHD8-206ENST00000553870 NKAPP1Q8N9T2 125 aa5.75□□□□□ -1.49
CHD8-206ENST00000553870 LOC107984156A0A0G2JMH3 177 aa5.74□□□□□ -1.49
CHD8-206ENST00000553870 IGLV7-43P04211 117 aa5.74□□□□□ -1.49
CHD8-206ENST00000553870 SMIM13P0DJ93 91 aa5.74□□□□□ -1.49
CHD8-206ENST00000553870 ARL17AQ8IVW1 177 aa5.74□□□□□ -1.49
CHD8-206ENST00000553870 HIST3H2BBQ8N257 126 aa5.74□□□□□ -1.49
CHD8-206ENST00000553870 LINC00167Q96N53 147 aa5.74□□□□□ -1.49
CHD8-206ENST00000553870 VPREB1P12018 145 aa5.73□□□□□ -1.49
CHD8-206ENST00000553870 TSPEAR-AS2P59090 65 aa5.73□□□□□ -1.49
CHD8-206ENST00000553870 REG3GQ6UW15 175 aa5.73□□□□□ -1.49
CHD8-206ENST00000553870 KRTAP11-1Q8IUC1 163 aa5.73□□□□□ -1.49
CHD8-206ENST00000553870 MIR7-3HGQ8N6C7 128 aa5.73□□□□□ -1.49
CHD8-206ENST00000553870 A0A0U1RRA0 63 aa5.72□□□□□ -1.49
CHD8-206ENST00000553870 SNRPEP62304 92 aaKnown RBP5.72□□□□□ -1.49
CHD8-206ENST00000553870 DIRC1Q969H9 104 aa5.72□□□□□ -1.49
CHD8-206ENST00000553870 HIST1H2BLQ99880 126 aa5.72□□□□□ -1.49
CHD8-206ENST00000553870 MYCBP2O75592 4640 aa5.71□□□□□ -1.5
CHD8-206ENST00000553870 IGKV2D-26A0A0A0MRZ7 120 aa5.71□□□□□ -1.5
CHD8-206ENST00000553870 LCE1DQ5T752 114 aa5.71□□□□□ -1.5
CHD8-206ENST00000553870 PKHD1L1Q86WI1 4243 aa5.71□□□□□ -1.5
CHD8-206ENST00000553870 IGLV1-50A0A075B6I6 118 aa5.7□□□□□ -1.5
CHD8-206ENST00000553870 A0A0J9YXY3 114 aa5.7□□□□□ -1.5
CHD8-206ENST00000553870 RPL37AP8A6NKH3 93 aa5.7□□□□□ -1.5
CHD8-206ENST00000553870 M0R378 163 aa5.7□□□□□ -1.5
CHD8-206ENST00000553870 ZNF861PO60384 105 aa5.7□□□□□ -1.5
CHD8-206ENST00000553870 BCE1O60756 84 aa5.7□□□□□ -1.5
CHD8-206ENST00000553870 TIMM17BO60830 172 aa5.7□□□□□ -1.5
CHD8-206ENST00000553870 BOD1L2Q8IYS8 172 aa5.7□□□□□ -1.5
CHD8-206ENST00000553870 LINC01600Q96MT4 127 aa5.7□□□□□ -1.5
CHD8-206ENST00000553870 GAGE10A6NGK3 116 aa5.69□□□□□ -1.5
CHD8-206ENST00000553870 C5orf52A6NGY3 159 aa5.69□□□□□ -1.5
CHD8-206ENST00000553870 RPL28P46779 137 aaKnown RBP5.69□□□□□ -1.5
CHD8-206ENST00000553870 ZNF815PA8K554 130 aa5.68□□□□□ -1.5
CHD8-206ENST00000553870 H0Y9J4 135 aa5.68□□□□□ -1.5
CHD8-206ENST00000553870 MIEN1Q9BRT3 115 aa5.68□□□□□ -1.5
CHD8-206ENST00000553870 DMBT1Q9UGM3 2413 aaPredicted RBP5.68□□□□□ -1.5
CHD8-206ENST00000553870 TRBV10-2A0A0K0K1G8 114 aa5.67□□□□□ -1.5
CHD8-206ENST00000553870 NDUFC2O95298 119 aa5.67□□□□□ -1.5
CHD8-206ENST00000553870 Q8NDZ9 215 aa5.67□□□□□ -1.5
CHD8-206ENST00000553870 LRP1Q07954 4544 aaKnown RBP5.67□□□□□ -1.5
CHD8-206ENST00000553870 FAT3Q8TDW7 4589 aa5.66□□□□□ -1.5
CHD8-206ENST00000553870 IGKV2-28A0A075B6P5 120 aa5.66□□□□□ -1.5
CHD8-206ENST00000553870 HSBP1L1C9JCN9 74 aa5.66□□□□□ -1.5
CHD8-206ENST00000553870 IGKV2D-28P01615 120 aa5.66□□□□□ -1.5
CHD8-206ENST00000553870 S100A12P80511 92 aa5.66□□□□□ -1.5
CHD8-206ENST00000553870 ADAMTSL4-AS1Q5T5F5 129 aa5.66□□□□□ -1.5
CHD8-206ENST00000553870 DAND5Q8N907 189 aa5.66□□□□□ -1.5
CHD8-206ENST00000553870 MT1HL1P0DM35 61 aa5.65□□□□□ -1.5
CHD8-206ENST00000553870 ANKRD39Q53RE8 183 aa5.65□□□□□ -1.5
CHD8-206ENST00000553870 Q6ZVH6 145 aa5.65□□□□□ -1.5
CHD8-206ENST00000553870 ATOH7Q8N100 152 aa5.65□□□□□ -1.5
CHD8-206ENST00000553870 COPS9Q8WXC6 57 aa5.65□□□□□ -1.5
CHD8-206ENST00000553870 LITAFQ99732 161 aa5.65□□□□□ -1.5
CHD8-206ENST00000553870 TMEM126AQ9H061 195 aa5.65□□□□□ -1.5
CHD8-206ENST00000553870 PPDPFQ9H3Y8 114 aa5.65□□□□□ -1.5
CHD8-206ENST00000553870 KCNQ1DNQ9H478 68 aa5.65□□□□□ -1.5
CHD8-206ENST00000553870 SPANXB1Q9NS25 103 aaPredicted RBP5.65□□□□□ -1.5
CHD8-206ENST00000553870 CBY1Q9Y3M2 126 aa5.65□□□□□ -1.5
CHD8-206ENST00000553870 TMEM238C9JI98 176 aa5.64□□□□□ -1.51
CHD8-206ENST00000553870 PRYO14603 147 aa5.64□□□□□ -1.51
CHD8-206ENST00000553870 SCGB1D1O95968 90 aa5.64□□□□□ -1.51
CHD8-206ENST00000553870 UBE2AP49459 152 aa5.64□□□□□ -1.51
CHD8-206ENST00000553870 KRTAP10-8P60410 259 aa5.64□□□□□ -1.51
CHD8-206ENST00000553870 SCGB1D4Q6XE38 83 aa5.64□□□□□ -1.51
CHD8-206ENST00000553870 KRTAP13-1Q8IUC0 172 aa5.64□□□□□ -1.51
CHD8-206ENST00000553870 LINC00308Q8TCZ7 52 aa5.64□□□□□ -1.51
CHD8-206ENST00000553870 NCR3O14931 201 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms