RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CFDP00746 253 aaPredicted RBP0.95□□□□□ -2.26
SYNE2-210ENST00000553455 IFNA21P01568 189 aa0.95□□□□□ -2.26
SYNE2-210ENST00000553455 CD3DP04234 171 aa0.95□□□□□ -2.26
SYNE2-210ENST00000553455 IL5P05113 134 aa0.95□□□□□ -2.26
SYNE2-210ENST00000553455 AKAIN1P0CW23 69 aa0.95□□□□□ -2.26
SYNE2-210ENST00000553455 TRAPPC2P0DI81 140 aa0.95□□□□□ -2.26
SYNE2-210ENST00000553455 TRAPPC2BP0DI82 140 aa0.95□□□□□ -2.26
SYNE2-210ENST00000553455 SAA1P0DJI8 122 aaPredicted RBP0.95□□□□□ -2.26
SYNE2-210ENST00000553455 RPL7P18124 248 aaKnown RBP0.95□□□□□ -2.26
SYNE2-210ENST00000553455 GNG2P59768 71 aa0.95□□□□□ -2.26
SYNE2-210ENST00000553455 PRCDQ00LT1 54 aa0.95□□□□□ -2.26
SYNE2-210ENST00000553455 WT1-ASQ06250 92 aa0.95□□□□□ -2.26
SYNE2-210ENST00000553455 NEDD8Q15843 81 aa0.95□□□□□ -2.26
SYNE2-210ENST00000553455 DEFB114Q30KQ6 69 aa0.95□□□□□ -2.26
SYNE2-210ENST00000553455 C10orf99Q6UWK7 81 aa0.95□□□□□ -2.26
SYNE2-210ENST00000553455 LINC00305Q7Z4B0 112 aa0.95□□□□□ -2.26
SYNE2-210ENST00000553455 LEAP2Q969E1 77 aa0.95□□□□□ -2.26
SYNE2-210ENST00000553455 PRELID3AQ96N28 172 aa0.95□□□□□ -2.26
SYNE2-210ENST00000553455 COPZ2Q9P299 210 aa0.95□□□□□ -2.26
SYNE2-210ENST00000553455 COMMD3Q9UBI1 195 aa0.95□□□□□ -2.26
SYNE2-210ENST00000553455 METTL1Q9UBP6 276 aaKnown RBP0.95□□□□□ -2.26
SYNE2-210ENST00000553455 SCP2D1Q9UJQ7 156 aa0.95□□□□□ -2.26
SYNE2-210ENST00000553455 DNAH5Q8TE73 4624 aa0.95□□□□□ -2.26
SYNE2-210ENST00000553455 DYNC1H1Q14204 4646 aaKnown RBP0.95□□□□□ -2.26
SYNE2-210ENST00000553455 A0A0J9YY99 117 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 TRBV27A0A0K0K1C4 114 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 C3orf85A0A1B0GTC6 90 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 SNRPGP15A8MWD9 76 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 CORTO00230 105 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 NDUFB6O95139 128 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 SFT2D2O95562 160 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 SLC25A4P12235 298 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 CBLN1P23435 193 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 S100GP29377 79 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 FXYD4P59646 89 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 LSM3P62310 102 aaKnown RBP0.94□□□□□ -2.26
SYNE2-210ENST00000553455 CATR1Q13166 79 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 OCIAD2Q56VL3 154 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 UNQ5815/PRO19632Q6UWF5 114 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 IDO2Q6ZQW0 420 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 S100ZQ8WXG8 99 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 MAFIPQ8WZ33 124 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 FXYD6Q9H0Q3 95 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 NAA60Q9H7X0 242 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 NPVFQ9HCQ7 196 aa0.94□□□□□ -2.26
SYNE2-210ENST00000553455 EPPK1P58107 5090 aaKnown RBP0.93□□□□□ -2.26
SYNE2-210ENST00000553455 LRP1BQ9NZR2 4599 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 FAM25AB3EWG3 89 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 FAM25CB3EWG5 89 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 FAM25GB3EWG6 89 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 SNAPC5O75971 98 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 TRACP01848 142 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 NMBP08949 121 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 IGLC1P0CG04 106 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 IL7P13232 177 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 FAUP35544 74 aaKnown RBP0.93□□□□□ -2.26
SYNE2-210ENST00000553455 SNCAP37840 140 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 NDUFA6P56556 154 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 SMCO1Q147U7 214 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 SAMD13Q5VXD3 122 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 TOMM20LQ6UXN7 152 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 KRTAP19-3Q7Z4W3 81 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 SNX29P2Q8IUI4 249 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 TOMM5Q8N4H5 51 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 CLEC2BQ92478 149 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 CIB3Q96Q77 187 aaPredicted RBP0.93□□□□□ -2.26
SYNE2-210ENST00000553455 TRGV9Q99603 122 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 FAM103A1Q9BTL3 118 aaKnown RBP0.93□□□□□ -2.26
SYNE2-210ENST00000553455 NMES1Q9C002 83 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 PKHD1L1Q86WI1 4243 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 RYR1P21817 5038 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 BIRC6Q9NR09 4857 aa0.93□□□□□ -2.26
SYNE2-210ENST00000553455 TRBV7-6A0A0J9YX20 115 aa0.92□□□□□ -2.26
SYNE2-210ENST00000553455 IFNA17P01571 189 aa0.92□□□□□ -2.26
SYNE2-210ENST00000553455 PRH1P02810 166 aa0.92□□□□□ -2.26
SYNE2-210ENST00000553455 SLC25A5P05141 298 aaKnown RBP0.92□□□□□ -2.26
SYNE2-210ENST00000553455 TPPP2P59282 170 aa0.92□□□□□ -2.26
SYNE2-210ENST00000553455 B2MP61769 119 aa0.92□□□□□ -2.26
SYNE2-210ENST00000553455 PLGLAQ15195 96 aa0.92□□□□□ -2.26
SYNE2-210ENST00000553455 DEFB136Q30KP8 78 aa0.92□□□□□ -2.26
SYNE2-210ENST00000553455 GRPEL2Q8TAA5 225 aa0.92□□□□□ -2.26
SYNE2-210ENST00000553455 RHPN1-AS1Q9BWJ2 59 aa0.92□□□□□ -2.26
SYNE2-210ENST00000553455 MRPL36Q9P0J6 103 aaKnown RBP0.92□□□□□ -2.26
SYNE2-210ENST00000553455 LENEPQ9Y5L5 61 aa0.92□□□□□ -2.26
SYNE2-210ENST00000553455 HSPG2P98160 4391 aa0.92□□□□□ -2.26
SYNE2-210ENST00000553455 APOBP04114 4563 aaKnown RBP0.91□□□□□ -2.26
SYNE2-210ENST00000553455 TRAV13-1A0A0B4J241 112 aa0.91□□□□□ -2.26
SYNE2-210ENST00000553455 RBAKDNA6NC62 111 aa0.91□□□□□ -2.26
SYNE2-210ENST00000553455 H3BMG7 143 aa0.91□□□□□ -2.26
SYNE2-210ENST00000553455 H3BNG1 76 aa0.91□□□□□ -2.26
SYNE2-210ENST00000553455 GNG7O60262 68 aa0.91□□□□□ -2.26
SYNE2-210ENST00000553455 MPC2O95563 127 aa0.91□□□□□ -2.26
SYNE2-210ENST00000553455 IGLC2P0DOY2 106 aa0.91□□□□□ -2.26
SYNE2-210ENST00000553455 PRB4P10163 310 aaPredicted RBP0.91□□□□□ -2.26
SYNE2-210ENST00000553455 TPT1P13693 172 aaKnown RBP0.91□□□□□ -2.26
SYNE2-210ENST00000553455 HLA-DRB4P13762 266 aa0.91□□□□□ -2.26
SYNE2-210ENST00000553455 PDE6GP18545 87 aa0.91□□□□□ -2.26
SYNE2-210ENST00000553455 FOXA3P55318 350 aaPredicted RBP0.91□□□□□ -2.26
SYNE2-210ENST00000553455 SERF2P84101 59 aa0.91□□□□□ -2.26
SYNE2-210ENST00000553455 TDRG1Q3Y452 100 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms