RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 ANKRD39Q53RE8 183 aa7.26□□□□□ -1.25
TMEM116-218ENST00000552839 SDIM1Q6ZPB5 146 aa7.26□□□□□ -1.25
TMEM116-218ENST00000552839 MIEN1Q9BRT3 115 aa7.26□□□□□ -1.25
TMEM116-218ENST00000552839 PAM16Q9Y3D7 125 aa7.26□□□□□ -1.25
TMEM116-218ENST00000552839 TLX1NBP0CAT3 122 aa7.25□□□□□ -1.25
TMEM116-218ENST00000552839 SMIM13P0DJ93 91 aa7.25□□□□□ -1.25
TMEM116-218ENST00000552839 SPATA45Q537H7 98 aa7.25□□□□□ -1.25
TMEM116-218ENST00000552839 CIRBP-AS1Q8TBR5 109 aa7.25□□□□□ -1.25
TMEM116-218ENST00000552839 IGKV2D-26A0A0A0MRZ7 120 aa7.24□□□□□ -1.25
TMEM116-218ENST00000552839 Q6ZRP5 223 aa7.24□□□□□ -1.25
TMEM116-218ENST00000552839 XAGE1AQ9HD64 81 aa7.24□□□□□ -1.25
TMEM116-218ENST00000552839 FAM19A5Q7Z5A7 132 aaPredicted RBP7.23□□□□□ -1.25
TMEM116-218ENST00000552839 SPACA4Q8TDM5 124 aa7.23□□□□□ -1.25
TMEM116-218ENST00000552839 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.23□□□□□ -1.25
TMEM116-218ENST00000552839 A0A0J9YXY3 114 aa7.22□□□□□ -1.25
TMEM116-218ENST00000552839 TMEM238C9JI98 176 aa7.22□□□□□ -1.25
TMEM116-218ENST00000552839 HNRNPA3P51991 378 aaKnown RBP7.22□□□□□ -1.25
TMEM116-218ENST00000552839 PYY3Q5JQD4 70 aa7.22□□□□□ -1.25
TMEM116-218ENST00000552839 MIR7-3HGQ8N6C7 128 aa7.22□□□□□ -1.25
TMEM116-218ENST00000552839 NKAPP1Q8N9T2 125 aa7.22□□□□□ -1.25
TMEM116-218ENST00000552839 TTTY13Q9BZ97 58 aa7.22□□□□□ -1.25
TMEM116-218ENST00000552839 MT1HL1P0DM35 61 aa7.21□□□□□ -1.26
TMEM116-218ENST00000552839 PCP2Q8IVA1 136 aa7.21□□□□□ -1.26
TMEM116-218ENST00000552839 COPS9Q8WXC6 57 aa7.21□□□□□ -1.26
TMEM116-218ENST00000552839 PKHD1L1Q86WI1 4243 aa7.2□□□□□ -1.26
TMEM116-218ENST00000552839 A0A087WYN8 130 aa7.2□□□□□ -1.26
TMEM116-218ENST00000552839 C7orf33Q8WU49 177 aa7.2□□□□□ -1.26
TMEM116-218ENST00000552839 SND1-IT1Q9HBX3 110 aa7.2□□□□□ -1.26
TMEM116-218ENST00000552839 M0QXV9 152 aa7.19□□□□□ -1.26
TMEM116-218ENST00000552839 TIMM17BO60830 172 aa7.19□□□□□ -1.26
TMEM116-218ENST00000552839 SMIM6P0DI80 62 aa7.19□□□□□ -1.26
TMEM116-218ENST00000552839 RPL37AP61513 92 aaKnown RBP7.19□□□□□ -1.26
TMEM116-218ENST00000552839 NPC2P61916 151 aa7.19□□□□□ -1.26
TMEM116-218ENST00000552839 UBE2BP63146 152 aa7.19□□□□□ -1.26
TMEM116-218ENST00000552839 RPL24P83731 157 aaKnown RBP7.19□□□□□ -1.26
TMEM116-218ENST00000552839 DAND5Q8N907 189 aa7.19□□□□□ -1.26
TMEM116-218ENST00000552839 PANO1I0J062 215 aa7.18□□□□□ -1.26
TMEM116-218ENST00000552839 COX8AP10176 69 aa7.18□□□□□ -1.26
TMEM116-218ENST00000552839 SRSF9Q13242 221 aaKnown RBP eCLIP7.18□□□□□ -1.26
TMEM116-218ENST00000552839 C9orf129Q5T035 196 aaKnown RBP7.18□□□□□ -1.26
TMEM116-218ENST00000552839 SLC25A34Q6PIV7 304 aa7.18□□□□□ -1.26
TMEM116-218ENST00000552839 BOD1L2Q8IYS8 172 aa7.18□□□□□ -1.26
TMEM116-218ENST00000552839 C14orf144Q96I85 54 aa7.18□□□□□ -1.26
TMEM116-218ENST00000552839 PLAC8Q9NZF1 115 aa7.17□□□□□ -1.26
TMEM116-218ENST00000552839 FAM168BA1KXE4 195 aa7.16□□□□□ -1.26
TMEM116-218ENST00000552839 LBHQ53QV2 105 aaPredicted RBP7.16□□□□□ -1.26
TMEM116-218ENST00000552839 RNF213Q63HN8 5207 aa7.15□□□□□ -1.26
TMEM116-218ENST00000552839 A0A1W2PNN7 141 aa7.14□□□□□ -1.27
TMEM116-218ENST00000552839 NCR3O14931 201 aa7.14□□□□□ -1.27
TMEM116-218ENST00000552839 Q6ZVH6 145 aa7.14□□□□□ -1.27
TMEM116-218ENST00000552839 HIST1H4GQ99525 98 aa7.14□□□□□ -1.27
TMEM116-218ENST00000552839 SPANXDQ9BXN6 97 aa7.14□□□□□ -1.27
TMEM116-218ENST00000552839 SPANXCQ9NY87 97 aa7.14□□□□□ -1.27
TMEM116-218ENST00000552839 LOC105371267A0A1B0GV96 52 aa7.13□□□□□ -1.27
TMEM116-218ENST00000552839 GAGE10A6NGK3 116 aa7.13□□□□□ -1.27
TMEM116-218ENST00000552839 DLEU1O43261 78 aa7.13□□□□□ -1.27
TMEM116-218ENST00000552839 IFITM1P13164 125 aa7.13□□□□□ -1.27
TMEM116-218ENST00000552839 ADAMTSL4-AS1Q5T5F5 129 aa7.13□□□□□ -1.27
TMEM116-218ENST00000552839 PHF5AQ7RTV0 110 aaKnown RBP7.13□□□□□ -1.27
TMEM116-218ENST00000552839 MRPL55Q7Z7F7 128 aaKnown RBP7.13□□□□□ -1.27
TMEM116-218ENST00000552839 LINC00308Q8TCZ7 52 aa7.13□□□□□ -1.27
TMEM116-218ENST00000552839 C22orf24Q9Y442 160 aa7.13□□□□□ -1.27
TMEM116-218ENST00000552839 SPANXB1Q9NS25 103 aaPredicted RBP7.12□□□□□ -1.27
TMEM116-218ENST00000552839 UQCR10Q9UDW1 63 aa7.12□□□□□ -1.27
TMEM116-218ENST00000552839 TP73-AS1Q9UF72 201 aa7.12□□□□□ -1.27
TMEM116-218ENST00000552839 VPREB1P12018 145 aa7.11□□□□□ -1.27
TMEM116-218ENST00000552839 S100A7L2Q5SY68 101 aa7.11□□□□□ -1.27
TMEM116-218ENST00000552839 LITAFQ99732 161 aa7.11□□□□□ -1.27
TMEM116-218ENST00000552839 LRP2P98164 4655 aa7.1□□□□□ -1.27
TMEM116-218ENST00000552839 IGLV5-37A0A075B6J1 123 aa7.1□□□□□ -1.27
TMEM116-218ENST00000552839 M0R378 163 aa7.1□□□□□ -1.27
TMEM116-218ENST00000552839 OR13C6PQ8NH95 151 aa7.1□□□□□ -1.27
TMEM116-218ENST00000552839 C12orf57Q99622 126 aa7.1□□□□□ -1.27
TMEM116-218ENST00000552839 IGKV2-28A0A075B6P5 120 aa7.09□□□□□ -1.27
TMEM116-218ENST00000552839 TSTD3H0UI37 97 aa7.09□□□□□ -1.27
TMEM116-218ENST00000552839 NDUFC2O95298 119 aa7.09□□□□□ -1.27
TMEM116-218ENST00000552839 IGKV2D-28P01615 120 aa7.09□□□□□ -1.27
TMEM116-218ENST00000552839 MUSTN1Q8IVN3 82 aa7.09□□□□□ -1.27
TMEM116-218ENST00000552839 PRO1933Q9H354 126 aa7.09□□□□□ -1.27
TMEM116-218ENST00000552839 CBY1Q9Y3M2 126 aa7.09□□□□□ -1.27
TMEM116-218ENST00000552839 RPL37AP8A6NKH3 93 aa7.08□□□□□ -1.28
TMEM116-218ENST00000552839 SOSTDC1Q6X4U4 206 aa7.08□□□□□ -1.28
TMEM116-218ENST00000552839 LINC00518Q8N0U6 118 aa7.08□□□□□ -1.28
TMEM116-218ENST00000552839 LINC00167Q96N53 147 aa7.08□□□□□ -1.28
TMEM116-218ENST00000552839 HIGD1BQ9P298 99 aa7.08□□□□□ -1.28
TMEM116-218ENST00000552839 TNXBP22105 4242 aa7.07□□□□□ -1.28
TMEM116-218ENST00000552839 TRBV10-2A0A0K0K1G8 114 aa7.07□□□□□ -1.28
TMEM116-218ENST00000552839 DDTP30046 118 aa7.07□□□□□ -1.28
TMEM116-218ENST00000552839 LOC107984156A0A0G2JMH3 177 aa7.06□□□□□ -1.28
TMEM116-218ENST00000552839 TMEM238LA0A1B0GVL6 79 aa7.06□□□□□ -1.28
TMEM116-218ENST00000552839 A6NJY4 79 aa7.06□□□□□ -1.28
TMEM116-218ENST00000552839 PRR3P79522 188 aaKnown RBP7.06□□□□□ -1.28
TMEM116-218ENST00000552839 C1orf137Q5JT78 98 aa7.06□□□□□ -1.28
TMEM116-218ENST00000552839 ARL17AQ8IVW1 177 aa7.06□□□□□ -1.28
TMEM116-218ENST00000552839 A6NDN8 102 aa7.05□□□□□ -1.28
TMEM116-218ENST00000552839 HSD52Q0P140 79 aa7.05□□□□□ -1.28
TMEM116-218ENST00000552839 TAL2Q16559 108 aa7.05□□□□□ -1.28
TMEM116-218ENST00000552839 C2orf91Q6ZV80 131 aa7.05□□□□□ -1.28
TMEM116-218ENST00000552839 KRTAP7-1Q8IUC3 87 aa7.05□□□□□ -1.28
TMEM116-218ENST00000552839 TRAV13-2A0A0B4J235 113 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms