RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 FRAS1Q86XX4 4008 aa4.88□□□□□ -1.63
RNF41-208ENST00000550379 A0A096LNI7 61 aa4.88□□□□□ -1.63
RNF41-208ENST00000550379 A0A0B4J2C4 111 aa4.88□□□□□ -1.63
RNF41-208ENST00000550379 EIF4EBP3O60516 100 aaPredicted RBP4.88□□□□□ -1.63
RNF41-208ENST00000550379 MUSTN1Q8IVN3 82 aa4.88□□□□□ -1.63
RNF41-208ENST00000550379 CBY1Q9Y3M2 126 aa4.88□□□□□ -1.63
RNF41-208ENST00000550379 BVES-AS1Q5T3Y7 98 aa4.87□□□□□ -1.63
RNF41-208ENST00000550379 KRTAP7-1Q8IUC3 87 aa4.87□□□□□ -1.63
RNF41-208ENST00000550379 FAT2Q9NYQ8 4349 aa4.86□□□□□ -1.63
RNF41-208ENST00000550379 IGKV2-28A0A075B6P5 120 aa4.86□□□□□ -1.63
RNF41-208ENST00000550379 TRAV13-2A0A0B4J235 113 aa4.86□□□□□ -1.63
RNF41-208ENST00000550379 A4D1N5 150 aa4.86□□□□□ -1.63
RNF41-208ENST00000550379 M0R378 163 aa4.86□□□□□ -1.63
RNF41-208ENST00000550379 IGKV2D-28P01615 120 aa4.86□□□□□ -1.63
RNF41-208ENST00000550379 IGLV6-57P01721 117 aa4.86□□□□□ -1.63
RNF41-208ENST00000550379 CTAG1AP78358 180 aa4.86□□□□□ -1.63
RNF41-208ENST00000550379 DAND5Q8N907 189 aa4.86□□□□□ -1.63
RNF41-208ENST00000550379 TMEM126AQ9H061 195 aa4.86□□□□□ -1.63
RNF41-208ENST00000550379 HYDINQ4G0P3 5121 aa4.85□□□□□ -1.63
RNF41-208ENST00000550379 CFC1BP0CG36 223 aa4.85□□□□□ -1.63
RNF41-208ENST00000550379 CFC1P0CG37 223 aa4.85□□□□□ -1.63
RNF41-208ENST00000550379 FXYD2P54710 66 aa4.85□□□□□ -1.63
RNF41-208ENST00000550379 KRTAP10-1P60331 282 aa4.85□□□□□ -1.63
RNF41-208ENST00000550379 RPL18AQ02543 176 aaKnown RBP4.85□□□□□ -1.63
RNF41-208ENST00000550379 GAGE2EQ4V326 116 aa4.85□□□□□ -1.63
RNF41-208ENST00000550379 LBHQ53QV2 105 aaPredicted RBP4.85□□□□□ -1.63
RNF41-208ENST00000550379 XAGE1AQ9HD64 81 aa4.85□□□□□ -1.63
RNF41-208ENST00000550379 GAGE2DQ9UEU5 116 aa4.85□□□□□ -1.63
RNF41-208ENST00000550379 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.85□□□□□ -1.63
RNF41-208ENST00000550379 RYR2Q92736 4967 aa4.85□□□□□ -1.63
RNF41-208ENST00000550379 A0A087WYN8 130 aa4.84□□□□□ -1.63
RNF41-208ENST00000550379 TRBV7-6A0A0J9YX20 115 aa4.84□□□□□ -1.63
RNF41-208ENST00000550379 A0A0U1RRA0 63 aa4.84□□□□□ -1.63
RNF41-208ENST00000550379 A0A1W2PNN7 141 aa4.84□□□□□ -1.63
RNF41-208ENST00000550379 GAGE2BQ13066 116 aa4.84□□□□□ -1.63
RNF41-208ENST00000550379 Q8NDZ9 215 aa4.84□□□□□ -1.63
RNF41-208ENST00000550379 KCNQ1DNQ9H478 68 aa4.84□□□□□ -1.63
RNF41-208ENST00000550379 HECTD4Q9Y4D8 3996 aa4.83□□□□□ -1.64
RNF41-208ENST00000550379 IGLV1-50A0A075B6I6 118 aa4.83□□□□□ -1.64
RNF41-208ENST00000550379 A6NDN8 102 aa4.83□□□□□ -1.64
RNF41-208ENST00000550379 PANO1I0J062 215 aa4.83□□□□□ -1.64
RNF41-208ENST00000550379 CDK2AP2O75956 126 aa4.83□□□□□ -1.64
RNF41-208ENST00000550379 SPRR1AP35321 89 aa4.83□□□□□ -1.64
RNF41-208ENST00000550379 MRPL55Q7Z7F7 128 aaKnown RBP4.83□□□□□ -1.64
RNF41-208ENST00000550379 LINC00337Q8N6G1 96 aa4.83□□□□□ -1.64
RNF41-208ENST00000550379 PRO1854Q9UHT4 67 aa4.83□□□□□ -1.64
RNF41-208ENST00000550379 C22orf24Q9Y442 160 aa4.83□□□□□ -1.64
RNF41-208ENST00000550379 H0Y9J4 135 aa4.82□□□□□ -1.64
RNF41-208ENST00000550379 RPL28P46779 137 aaKnown RBP4.82□□□□□ -1.64
RNF41-208ENST00000550379 SERTAD4-AS1Q5TG53 156 aa4.82□□□□□ -1.64
RNF41-208ENST00000550379 FAM30AQ9NZY2 134 aa4.82□□□□□ -1.64
RNF41-208ENST00000550379 PKD1P98161 4303 aa4.82□□□□□ -1.64
RNF41-208ENST00000550379 PCP4L1A6NKN8 68 aa4.81□□□□□ -1.64
RNF41-208ENST00000550379 KRTAP4-16G5E9R7 235 aaPredicted RBP4.81□□□□□ -1.64
RNF41-208ENST00000550379 CHTF8P0CG12 524 aa4.81□□□□□ -1.64
RNF41-208ENST00000550379 LINC01620Q4KN68 170 aa4.81□□□□□ -1.64
RNF41-208ENST00000550379 NKAPP1Q8N9T2 125 aa4.81□□□□□ -1.64
RNF41-208ENST00000550379 CIRBP-AS1Q8TBR5 109 aa4.81□□□□□ -1.64
RNF41-208ENST00000550379 C7orf33Q8WU49 177 aa4.81□□□□□ -1.64
RNF41-208ENST00000550379 SNHG12Q9BXW3 62 aa4.81□□□□□ -1.64
RNF41-208ENST00000550379 IGKV2-24A0A0C4DH68 120 aa4.8□□□□□ -1.64
RNF41-208ENST00000550379 FAM168BA1KXE4 195 aa4.8□□□□□ -1.64
RNF41-208ENST00000550379 M0QXV9 152 aa4.8□□□□□ -1.64
RNF41-208ENST00000550379 PRYO14603 147 aa4.8□□□□□ -1.64
RNF41-208ENST00000550379 HINT1P49773 126 aaPredicted RBP4.8□□□□□ -1.64
RNF41-208ENST00000550379 XGP55808 180 aa4.8□□□□□ -1.64
RNF41-208ENST00000550379 LINC00167Q96N53 147 aa4.8□□□□□ -1.64
RNF41-208ENST00000550379 DNAH11Q96DT5 4516 aa4.8□□□□□ -1.64
RNF41-208ENST00000550379 TRBV10-3A0A0K0K1G6 114 aa4.79□□□□□ -1.64
RNF41-208ENST00000550379 COL5A1-AS1Q5SY13 56 aa4.79□□□□□ -1.64
RNF41-208ENST00000550379 SCXQ7RTU7 201 aa4.79□□□□□ -1.64
RNF41-208ENST00000550379 NHP2Q9NX24 153 aaKnown RBP4.79□□□□□ -1.64
RNF41-208ENST00000550379 PKHD1P08F94 4074 aa4.78□□□□□ -1.64
RNF41-208ENST00000550379 A0A1B0GX51 115 aa4.78□□□□□ -1.64
RNF41-208ENST00000550379 H0YGX0 51 aa4.78□□□□□ -1.64
RNF41-208ENST00000550379 INAFM2P0DMQ5 153 aa4.78□□□□□ -1.64
RNF41-208ENST00000550379 NPC2P61916 151 aa4.78□□□□□ -1.64
RNF41-208ENST00000550379 PRR3P79522 188 aaKnown RBP4.78□□□□□ -1.64
RNF41-208ENST00000550379 S100A7L2Q5SY68 101 aa4.78□□□□□ -1.64
RNF41-208ENST00000550379 RAB37Q96AX2 223 aa4.78□□□□□ -1.64
RNF41-208ENST00000550379 FAM19A5Q7Z5A7 132 aaPredicted RBP4.77□□□□□ -1.65
RNF41-208ENST00000550379 SMIM11BQ8TCY0 68 aa4.77□□□□□ -1.65
RNF41-208ENST00000550379 TRAV23DV6A0A075B6W5 121 aa4.76□□□□□ -1.65
RNF41-208ENST00000550379 ZNF73O43830 326 aaPredicted RBP4.76□□□□□ -1.65
RNF41-208ENST00000550379 FUSP35637 526 aaKnown RBP eCLIP4.76□□□□□ -1.65
RNF41-208ENST00000550379 RPL13AP40429 203 aaKnown RBP4.76□□□□□ -1.65
RNF41-208ENST00000550379 RYR3Q15413 4870 aa4.76□□□□□ -1.65
RNF41-208ENST00000550379 KRTAP13-1Q8IUC0 172 aa4.76□□□□□ -1.65
RNF41-208ENST00000550379 DPH3Q96FX2 82 aa4.76□□□□□ -1.65
RNF41-208ENST00000550379 DNAH5Q8TE73 4624 aa4.76□□□□□ -1.65
RNF41-208ENST00000550379 C9orf118A6NHY6 69 aa4.75□□□□□ -1.65
RNF41-208ENST00000550379 TAX1BP3O14907 124 aa4.75□□□□□ -1.65
RNF41-208ENST00000550379 NCR3O14931 201 aa4.75□□□□□ -1.65
RNF41-208ENST00000550379 BCE1O60756 84 aa4.75□□□□□ -1.65
RNF41-208ENST00000550379 TSPAN13O95857 204 aa4.75□□□□□ -1.65
RNF41-208ENST00000550379 COX6CP09669 75 aa4.75□□□□□ -1.65
RNF41-208ENST00000550379 ELOF1P60002 83 aaKnown RBP4.75□□□□□ -1.65
RNF41-208ENST00000550379 VAMP3Q15836 100 aa4.75□□□□□ -1.65
RNF41-208ENST00000550379 REG3GQ6UW15 175 aa4.75□□□□□ -1.65
RNF41-208ENST00000550379 Q6ZRX8 168 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms