RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 IGLV1-50A0A075B6I6 118 aa5.83□□□□□ -1.48
HDAC7-229ENST00000549883 HIST1H2BKO60814 126 aa5.83□□□□□ -1.48
HDAC7-229ENST00000549883 HIST1H2BJP06899 126 aa5.83□□□□□ -1.48
HDAC7-229ENST00000549883 HIST1H2BOP23527 126 aa5.83□□□□□ -1.48
HDAC7-229ENST00000549883 HIST1H2BBP33778 126 aa5.83□□□□□ -1.48
HDAC7-229ENST00000549883 HIST1H2BDP58876 126 aa5.83□□□□□ -1.48
HDAC7-229ENST00000549883 HIST1H2BCP62807 126 aa5.83□□□□□ -1.48
HDAC7-229ENST00000549883 COX17Q14061 63 aa5.83□□□□□ -1.48
HDAC7-229ENST00000549883 HIST2H2BEQ16778 126 aa5.83□□□□□ -1.48
HDAC7-229ENST00000549883 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.83□□□□□ -1.48
HDAC7-229ENST00000549883 KRTAP13-1Q8IUC0 172 aa5.83□□□□□ -1.48
HDAC7-229ENST00000549883 HIST1H2BHQ93079 126 aa5.83□□□□□ -1.48
HDAC7-229ENST00000549883 HIST1H2BNQ99877 126 aa5.83□□□□□ -1.48
HDAC7-229ENST00000549883 HIST1H2BMQ99879 126 aa5.83□□□□□ -1.48
HDAC7-229ENST00000549883 ANAPC11Q9NYG5 84 aa5.83□□□□□ -1.48
HDAC7-229ENST00000549883 PRLHP81277 87 aa5.82□□□□□ -1.48
HDAC7-229ENST00000549883 NDUFA12Q9UI09 145 aa5.82□□□□□ -1.48
HDAC7-229ENST00000549883 A0A087X002 238 aa5.81□□□□□ -1.48
HDAC7-229ENST00000549883 MIR7-3HGQ8N6C7 128 aa5.81□□□□□ -1.48
HDAC7-229ENST00000549883 HSPB8Q9UJY1 196 aa5.81□□□□□ -1.48
HDAC7-229ENST00000549883 M0R378 163 aa5.8□□□□□ -1.48
HDAC7-229ENST00000549883 LEPROTO15243 131 aa5.8□□□□□ -1.48
HDAC7-229ENST00000549883 DPM2O94777 84 aa5.8□□□□□ -1.48
HDAC7-229ENST00000549883 RPL28P46779 137 aaKnown RBP5.8□□□□□ -1.48
HDAC7-229ENST00000549883 MEIG1Q5JSS6 88 aa5.8□□□□□ -1.48
HDAC7-229ENST00000549883 SFTA2Q6UW10 78 aa5.8□□□□□ -1.48
HDAC7-229ENST00000549883 DAND5Q8N907 189 aa5.8□□□□□ -1.48
HDAC7-229ENST00000549883 TMEM126AQ9H061 195 aa5.8□□□□□ -1.48
HDAC7-229ENST00000549883 NCR3O14931 201 aa5.79□□□□□ -1.48
HDAC7-229ENST00000549883 PLNP26678 52 aa5.79□□□□□ -1.48
HDAC7-229ENST00000549883 UBE2AP49459 152 aa5.79□□□□□ -1.48
HDAC7-229ENST00000549883 RPL24P83731 157 aaKnown RBP5.79□□□□□ -1.48
HDAC7-229ENST00000549883 BOD1L2Q8IYS8 172 aa5.79□□□□□ -1.48
HDAC7-229ENST00000549883 MYMXA0A1B0GTQ4 84 aa5.78□□□□□ -1.48
HDAC7-229ENST00000549883 J3QQQ9 107 aa5.78□□□□□ -1.48
HDAC7-229ENST00000549883 IGKCP01834 107 aa5.78□□□□□ -1.48
HDAC7-229ENST00000549883 HERV-K104P63124 156 aa5.78□□□□□ -1.48
HDAC7-229ENST00000549883 FAM19A1Q7Z5A9 133 aa5.78□□□□□ -1.48
HDAC7-229ENST00000549883 MAP1LC3CQ9BXW4 147 aa5.78□□□□□ -1.48
HDAC7-229ENST00000549883 SYS1-DBNDD2H3BUS1 97 aa5.77□□□□□ -1.49
HDAC7-229ENST00000549883 EIF4EBP3O60516 100 aaPredicted RBP5.77□□□□□ -1.49
HDAC7-229ENST00000549883 PLEKHB2Q96CS7 222 aa5.77□□□□□ -1.49
HDAC7-229ENST00000549883 LRP2P98164 4655 aa5.77□□□□□ -1.49
HDAC7-229ENST00000549883 ATP6V1G1O75348 118 aa5.76□□□□□ -1.49
HDAC7-229ENST00000549883 KRTAP13-2Q52LG2 175 aa5.76□□□□□ -1.49
HDAC7-229ENST00000549883 TRBV10-3A0A0K0K1G6 114 aa5.75□□□□□ -1.49
HDAC7-229ENST00000549883 LGALS3P17931 250 aaKnown RBP5.75□□□□□ -1.49
HDAC7-229ENST00000549883 ADAMTSL4-AS1Q5T5F5 129 aa5.75□□□□□ -1.49
HDAC7-229ENST00000549883 SOSTDC1Q6X4U4 206 aa5.75□□□□□ -1.49
HDAC7-229ENST00000549883 IGKV2D-26A0A0A0MRZ7 120 aa5.74□□□□□ -1.49
HDAC7-229ENST00000549883 E9PLD3 99 aa5.74□□□□□ -1.49
HDAC7-229ENST00000549883 TSPAN13O95857 204 aa5.74□□□□□ -1.49
HDAC7-229ENST00000549883 C3orf79P0CE67 100 aa5.74□□□□□ -1.49
HDAC7-229ENST00000549883 RPL13AP40429 203 aaKnown RBP5.74□□□□□ -1.49
HDAC7-229ENST00000549883 HERVK_113P61574 105 aa5.74□□□□□ -1.49
HDAC7-229ENST00000549883 NPC2P61916 151 aa5.74□□□□□ -1.49
HDAC7-229ENST00000549883 LINC01545Q5VT33 79 aa5.74□□□□□ -1.49
HDAC7-229ENST00000549883 HIGD2AQ9BW72 106 aa5.74□□□□□ -1.49
HDAC7-229ENST00000549883 TTTY13Q9BZ97 58 aa5.74□□□□□ -1.49
HDAC7-229ENST00000549883 UBR4Q5T4S7 5183 aa5.73□□□□□ -1.49
HDAC7-229ENST00000549883 LOC107984156A0A0G2JMH3 177 aa5.73□□□□□ -1.49
HDAC7-229ENST00000549883 A0A0J9YXY3 114 aa5.73□□□□□ -1.49
HDAC7-229ENST00000549883 CRYGAP11844 174 aa5.73□□□□□ -1.49
HDAC7-229ENST00000549883 COA6Q5JTJ3 125 aaKnown RBP5.73□□□□□ -1.49
HDAC7-229ENST00000549883 ARL17AQ8IVW1 177 aa5.73□□□□□ -1.49
HDAC7-229ENST00000549883 TYMSOSQ8TAI1 123 aa5.73□□□□□ -1.49
HDAC7-229ENST00000549883 LPAP08519 4548 aa5.73□□□□□ -1.49
HDAC7-229ENST00000549883 KRTAP4-16G5E9R7 235 aaPredicted RBP5.72□□□□□ -1.49
HDAC7-229ENST00000549883 SPRR1AP35321 89 aa5.72□□□□□ -1.49
HDAC7-229ENST00000549883 NMUP48645 174 aa5.72□□□□□ -1.49
HDAC7-229ENST00000549883 PET117Q6UWS5 81 aa5.72□□□□□ -1.49
HDAC7-229ENST00000549883 KCNQ1DNQ9H478 68 aa5.72□□□□□ -1.49
HDAC7-229ENST00000549883 LINC00587B1AMM8 73 aa5.71□□□□□ -1.5
HDAC7-229ENST00000549883 PRYO14603 147 aa5.71□□□□□ -1.5
HDAC7-229ENST00000549883 KRTDAPP60985 99 aa5.71□□□□□ -1.5
HDAC7-229ENST00000549883 C3orf22Q8N5N4 141 aa5.71□□□□□ -1.5
HDAC7-229ENST00000549883 LITAFQ99732 161 aa5.71□□□□□ -1.5
HDAC7-229ENST00000549883 ERC2-IT1O76042 136 aa5.69□□□□□ -1.5
HDAC7-229ENST00000549883 DDTP30046 118 aa5.69□□□□□ -1.5
HDAC7-229ENST00000549883 FAM229BQ4G0N7 80 aa5.69□□□□□ -1.5
HDAC7-229ENST00000549883 ATOH7Q8N100 152 aa5.69□□□□□ -1.5
HDAC7-229ENST00000549883 LINC00337Q8N6G1 96 aa5.69□□□□□ -1.5
HDAC7-229ENST00000549883 SMCR5Q8TEV8 140 aa5.69□□□□□ -1.5
HDAC7-229ENST00000549883 SPRR4Q96PI1 79 aa5.69□□□□□ -1.5
HDAC7-229ENST00000549883 B5MCH6 92 aa5.68□□□□□ -1.5
HDAC7-229ENST00000549883 PRR4Q16378 134 aa5.68□□□□□ -1.5
HDAC7-229ENST00000549883 ANKRD39Q53RE8 183 aa5.68□□□□□ -1.5
HDAC7-229ENST00000549883 PPDPFQ9H3Y8 114 aa5.68□□□□□ -1.5
HDAC7-229ENST00000549883 TRBV10-2A0A0K0K1G8 114 aa5.67□□□□□ -1.5
HDAC7-229ENST00000549883 ETDCA0A1B0GVM5 59 aa5.67□□□□□ -1.5
HDAC7-229ENST00000549883 ZNF815PA8K554 130 aa5.67□□□□□ -1.5
HDAC7-229ENST00000549883 IGLV6-57P01721 117 aa5.67□□□□□ -1.5
HDAC7-229ENST00000549883 LINC00308Q8TCZ7 52 aa5.67□□□□□ -1.5
HDAC7-229ENST00000549883 RETNLBQ9BQ08 111 aa5.67□□□□□ -1.5
HDAC7-229ENST00000549883 Q9BRP9 147 aa5.67□□□□□ -1.5
HDAC7-229ENST00000549883 MIEN1Q9BRT3 115 aa5.67□□□□□ -1.5
HDAC7-229ENST00000549883 SPANXB1Q9NS25 103 aaPredicted RBP5.67□□□□□ -1.5
HDAC7-229ENST00000549883 NDUFC2O95298 119 aa5.66□□□□□ -1.5
HDAC7-229ENST00000549883 LINC00304Q8N9R0 145 aa5.66□□□□□ -1.5
HDAC7-229ENST00000549883 TIMM17BO60830 172 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms