RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 HIST1H2BOP23527 126 aa3.71□□□□□ -1.82
EFCAB2-215ENST00000549220 HIST1H2BBP33778 126 aa3.71□□□□□ -1.82
EFCAB2-215ENST00000549220 HIST1H2BDP58876 126 aa3.71□□□□□ -1.82
EFCAB2-215ENST00000549220 HIST1H2BCP62807 126 aa3.71□□□□□ -1.82
EFCAB2-215ENST00000549220 KIAA0087Q14695 138 aa3.71□□□□□ -1.82
EFCAB2-215ENST00000549220 HIST2H2BEQ16778 126 aa3.71□□□□□ -1.82
EFCAB2-215ENST00000549220 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.71□□□□□ -1.82
EFCAB2-215ENST00000549220 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
EFCAB2-215ENST00000549220 FAM19A5Q7Z5A7 132 aaPredicted RBP3.71□□□□□ -1.82
EFCAB2-215ENST00000549220 FAM19A3Q7Z5A8 133 aa3.71□□□□□ -1.82
EFCAB2-215ENST00000549220 HIST1H2BHQ93079 126 aa3.71□□□□□ -1.82
EFCAB2-215ENST00000549220 HIST1H2BNQ99877 126 aa3.71□□□□□ -1.82
EFCAB2-215ENST00000549220 HIST1H2BMQ99879 126 aa3.71□□□□□ -1.82
EFCAB2-215ENST00000549220 PMCHL2Q9BQD1 86 aa3.71□□□□□ -1.82
EFCAB2-215ENST00000549220 PKIGQ9Y2B9 76 aa3.71□□□□□ -1.82
EFCAB2-215ENST00000549220 ABCA13Q86UQ4 5058 aa3.71□□□□□ -1.82
EFCAB2-215ENST00000549220 FAM168BA1KXE4 195 aa3.7□□□□□ -1.82
EFCAB2-215ENST00000549220 INAFM2P0DMQ5 153 aa3.7□□□□□ -1.82
EFCAB2-215ENST00000549220 RPL37AP61513 92 aaKnown RBP3.7□□□□□ -1.82
EFCAB2-215ENST00000549220 Q8IZM0 81 aa3.7□□□□□ -1.82
EFCAB2-215ENST00000549220 LINC01561Q8N1V8 128 aa3.7□□□□□ -1.82
EFCAB2-215ENST00000549220 ZNF625Q96I27 306 aaPredicted RBP3.7□□□□□ -1.82
EFCAB2-215ENST00000549220 MRPL35Q9NZE8 188 aaKnown RBP3.7□□□□□ -1.82
EFCAB2-215ENST00000549220 HSPB8Q9UJY1 196 aa3.7□□□□□ -1.82
EFCAB2-215ENST00000549220 TRBV30A0A0K0K1B3 111 aa3.69□□□□□ -1.82
EFCAB2-215ENST00000549220 F8VRH5 84 aa3.69□□□□□ -1.82
EFCAB2-215ENST00000549220 PFN2P35080 140 aa3.69□□□□□ -1.82
EFCAB2-215ENST00000549220 Q6ZRP5 223 aa3.69□□□□□ -1.82
EFCAB2-215ENST00000549220 C7orf33Q8WU49 177 aa3.69□□□□□ -1.82
EFCAB2-215ENST00000549220 XAGE1AQ9HD64 81 aa3.69□□□□□ -1.82
EFCAB2-215ENST00000549220 LINC00474Q9P2X8 69 aa3.69□□□□□ -1.82
EFCAB2-215ENST00000549220 PCLOQ9Y6V0 5065 aa3.69□□□□□ -1.82
EFCAB2-215ENST00000549220 TRAV12-1A0A0B4J245 112 aa3.68□□□□□ -1.82
EFCAB2-215ENST00000549220 A0A0U1RRA0 63 aa3.68□□□□□ -1.82
EFCAB2-215ENST00000549220 A0A1W2PNN7 141 aa3.68□□□□□ -1.82
EFCAB2-215ENST00000549220 F8WDY8 70 aa3.68□□□□□ -1.82
EFCAB2-215ENST00000549220 CXCL5P42830 114 aa3.68□□□□□ -1.82
EFCAB2-215ENST00000549220 CIRBPQ14011 172 aaKnown RBP3.68□□□□□ -1.82
EFCAB2-215ENST00000549220 PHF5AQ7RTV0 110 aaKnown RBP3.68□□□□□ -1.82
EFCAB2-215ENST00000549220 MAP1LC3CQ9BXW4 147 aa3.68□□□□□ -1.82
EFCAB2-215ENST00000549220 PLAC8Q9NZF1 115 aa3.68□□□□□ -1.82
EFCAB2-215ENST00000549220 IGLV9-49A0A0B4J1Y8 123 aa3.67□□□□□ -1.82
EFCAB2-215ENST00000549220 TMEM223A0PJW6 202 aa3.67□□□□□ -1.82
EFCAB2-215ENST00000549220 NDUFC2-KCTD14E9PQ53 114 aa3.67□□□□□ -1.82
EFCAB2-215ENST00000549220 DPM2O94777 84 aa3.67□□□□□ -1.82
EFCAB2-215ENST00000549220 KRTDAPP60985 99 aa3.67□□□□□ -1.82
EFCAB2-215ENST00000549220 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
EFCAB2-215ENST00000549220 M0QXV9 152 aa3.66□□□□□ -1.82
EFCAB2-215ENST00000549220 IGKCP01834 107 aa3.66□□□□□ -1.82
EFCAB2-215ENST00000549220 TLX1NBP0CAT3 122 aa3.66□□□□□ -1.82
EFCAB2-215ENST00000549220 LINC00158P58513 81 aa3.66□□□□□ -1.82
EFCAB2-215ENST00000549220 HERVK_113P61574 105 aa3.66□□□□□ -1.82
EFCAB2-215ENST00000549220 UBE2BP63146 152 aa3.66□□□□□ -1.82
EFCAB2-215ENST00000549220 MEIG1Q5JSS6 88 aa3.66□□□□□ -1.82
EFCAB2-215ENST00000549220 C9orf129Q5T035 196 aaKnown RBP3.66□□□□□ -1.82
EFCAB2-215ENST00000549220 VPS13BQ7Z7G8 4022 aa3.66□□□□□ -1.82
EFCAB2-215ENST00000549220 A4D1N5 150 aa3.65□□□□□ -1.83
EFCAB2-215ENST00000549220 C5orf52A6NGY3 159 aa3.65□□□□□ -1.83
EFCAB2-215ENST00000549220 SYS1-DBNDD2H3BUS1 97 aa3.65□□□□□ -1.83
EFCAB2-215ENST00000549220 S100A6P06703 90 aa3.65□□□□□ -1.83
EFCAB2-215ENST00000549220 C3orf79P0CE67 100 aa3.65□□□□□ -1.83
EFCAB2-215ENST00000549220 PLNP26678 52 aa3.65□□□□□ -1.83
EFCAB2-215ENST00000549220 S100A2P29034 98 aa3.65□□□□□ -1.83
EFCAB2-215ENST00000549220 HNRNPA3P51991 378 aaKnown RBP3.65□□□□□ -1.83
EFCAB2-215ENST00000549220 ERG28Q9UKR5 140 aa3.65□□□□□ -1.83
EFCAB2-215ENST00000549220 PKHD1L1Q86WI1 4243 aa3.65□□□□□ -1.83
EFCAB2-215ENST00000549220 SMIM13P0DJ93 91 aa3.64□□□□□ -1.83
EFCAB2-215ENST00000549220 LGALS3P17931 250 aaKnown RBP3.64□□□□□ -1.83
EFCAB2-215ENST00000549220 TSPEAR-AS2P59090 65 aa3.64□□□□□ -1.83
EFCAB2-215ENST00000549220 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
EFCAB2-215ENST00000549220 PRR3P79522 188 aaKnown RBP3.64□□□□□ -1.83
EFCAB2-215ENST00000549220 C1orf137Q5JT78 98 aa3.64□□□□□ -1.83
EFCAB2-215ENST00000549220 ATOH7Q8N100 152 aa3.64□□□□□ -1.83
EFCAB2-215ENST00000549220 NKAPP1Q8N9T2 125 aa3.64□□□□□ -1.83
EFCAB2-215ENST00000549220 NDUFA12Q9UI09 145 aa3.64□□□□□ -1.83
EFCAB2-215ENST00000549220 MYMXA0A1B0GTQ4 84 aa3.63□□□□□ -1.83
EFCAB2-215ENST00000549220 RPL37AP8A6NKH3 93 aa3.63□□□□□ -1.83
EFCAB2-215ENST00000549220 J3QQQ9 107 aa3.63□□□□□ -1.83
EFCAB2-215ENST00000549220 LEPROTO15243 131 aa3.63□□□□□ -1.83
EFCAB2-215ENST00000549220 KRTAP10-4P60372 401 aaPredicted RBP3.63□□□□□ -1.83
EFCAB2-215ENST00000549220 NPC2P61916 151 aa3.63□□□□□ -1.83
EFCAB2-215ENST00000549220 KRTAP7-1Q8IUC3 87 aa3.63□□□□□ -1.83
EFCAB2-215ENST00000549220 PLEKHB2Q96CS7 222 aa3.63□□□□□ -1.83
EFCAB2-215ENST00000549220 SND1-IT1Q9HBX3 110 aa3.63□□□□□ -1.83
EFCAB2-215ENST00000549220 PSORS1C2Q9UIG4 136 aa3.63□□□□□ -1.83
EFCAB2-215ENST00000549220 C22orf24Q9Y442 160 aa3.63□□□□□ -1.83
EFCAB2-215ENST00000549220 DMBT1Q9UGM3 2413 aaPredicted RBP3.63□□□□□ -1.83
EFCAB2-215ENST00000549220 C20orf202A1L168 122 aa3.62□□□□□ -1.83
EFCAB2-215ENST00000549220 COA6Q5JTJ3 125 aaKnown RBP3.62□□□□□ -1.83
EFCAB2-215ENST00000549220 KRTAP11-1Q8IUC1 163 aa3.62□□□□□ -1.83
EFCAB2-215ENST00000549220 HIST3H2BBQ8N257 126 aa3.62□□□□□ -1.83
EFCAB2-215ENST00000549220 DAND5Q8N907 189 aa3.62□□□□□ -1.83
EFCAB2-215ENST00000549220 IGKV2-28A0A075B6P5 120 aa3.61□□□□□ -1.83
EFCAB2-215ENST00000549220 NCR3O14931 201 aa3.61□□□□□ -1.83
EFCAB2-215ENST00000549220 IGKV2D-28P01615 120 aa3.61□□□□□ -1.83
EFCAB2-215ENST00000549220 NMUP48645 174 aa3.61□□□□□ -1.83
EFCAB2-215ENST00000549220 LBHQ53QV2 105 aaPredicted RBP3.61□□□□□ -1.83
EFCAB2-215ENST00000549220 LINC01545Q5VT33 79 aa3.61□□□□□ -1.83
EFCAB2-215ENST00000549220 SFTA2Q6UW10 78 aa3.61□□□□□ -1.83
EFCAB2-215ENST00000549220 MRPL55Q7Z7F7 128 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 459.4 ms