RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 LBHQ53QV2 105 aaPredicted RBP9.64□□□□□ -0.87
CHMP1A-206ENST00000549139 C1orf137Q5JT78 98 aa9.64□□□□□ -0.87
CHMP1A-206ENST00000549139 KRTAP11-1Q8IUC1 163 aa9.64□□□□□ -0.87
CHMP1A-206ENST00000549139 HERVK_113P61574 105 aa9.63□□□□□ -0.87
CHMP1A-206ENST00000549139 HERV-K104P63124 156 aa9.63□□□□□ -0.87
CHMP1A-206ENST00000549139 PLEKHB2Q96CS7 222 aa9.63□□□□□ -0.87
CHMP1A-206ENST00000549139 IGLV5-37A0A075B6J1 123 aa9.62□□□□□ -0.87
CHMP1A-206ENST00000549139 PET117Q6UWS5 81 aa9.62□□□□□ -0.87
CHMP1A-206ENST00000549139 SND1-IT1Q9HBX3 110 aa9.62□□□□□ -0.87
CHMP1A-206ENST00000549139 NDUFA12Q9UI09 145 aa9.62□□□□□ -0.87
CHMP1A-206ENST00000549139 MUC2Q02817 5179 aa9.62□□□□□ -0.87
CHMP1A-206ENST00000549139 MYMXA0A1B0GTQ4 84 aa9.61□□□□□ -0.87
CHMP1A-206ENST00000549139 LINC00587B1AMM8 73 aa9.61□□□□□ -0.87
CHMP1A-206ENST00000549139 LINC00158P58513 81 aa9.61□□□□□ -0.87
CHMP1A-206ENST00000549139 LINC01545Q5VT33 79 aa9.61□□□□□ -0.87
CHMP1A-206ENST00000549139 MRPL55Q7Z7F7 128 aaKnown RBP9.61□□□□□ -0.87
CHMP1A-206ENST00000549139 IGLV7-43P04211 117 aa9.6□□□□□ -0.87
CHMP1A-206ENST00000549139 C3orf79P0CE67 100 aa9.6□□□□□ -0.87
CHMP1A-206ENST00000549139 J3QQQ9 107 aa9.59□□□□□ -0.87
CHMP1A-206ENST00000549139 TSPEAR-AS2P59090 65 aa9.59□□□□□ -0.87
CHMP1A-206ENST00000549139 MEIG1Q5JSS6 88 aa9.59□□□□□ -0.87
CHMP1A-206ENST00000549139 LINC00167Q96N53 147 aa9.59□□□□□ -0.87
CHMP1A-206ENST00000549139 SMIM13P0DJ93 91 aa9.58□□□□□ -0.88
CHMP1A-206ENST00000549139 NMUP48645 174 aa9.58□□□□□ -0.88
CHMP1A-206ENST00000549139 RPL24P83731 157 aaKnown RBP9.58□□□□□ -0.88
CHMP1A-206ENST00000549139 NKAPP1Q8N9T2 125 aa9.58□□□□□ -0.88
CHMP1A-206ENST00000549139 A0A0U1RRA0 63 aa9.57□□□□□ -0.88
CHMP1A-206ENST00000549139 E9PLD3 99 aa9.57□□□□□ -0.88
CHMP1A-206ENST00000549139 VPREB1P12018 145 aa9.57□□□□□ -0.88
CHMP1A-206ENST00000549139 LGALS3P17931 250 aaKnown RBP9.57□□□□□ -0.88
CHMP1A-206ENST00000549139 REG3GQ6UW15 175 aa9.56□□□□□ -0.88
CHMP1A-206ENST00000549139 KRTAP9-2Q9BYQ4 174 aa9.56□□□□□ -0.88
CHMP1A-206ENST00000549139 KRTDAPP60985 99 aa9.55□□□□□ -0.88
CHMP1A-206ENST00000549139 RPL37AP8A6NKH3 93 aa9.54□□□□□ -0.88
CHMP1A-206ENST00000549139 MIR7-3HGQ8N6C7 128 aa9.54□□□□□ -0.88
CHMP1A-206ENST00000549139 GAGE10A6NGK3 116 aa9.53□□□□□ -0.88
CHMP1A-206ENST00000549139 DIRC1Q969H9 104 aa9.53□□□□□ -0.88
CHMP1A-206ENST00000549139 Q8NDZ9 215 aa9.52□□□□□ -0.89
CHMP1A-206ENST00000549139 IGLV1-50A0A075B6I6 118 aa9.51□□□□□ -0.89
CHMP1A-206ENST00000549139 LOC107984156A0A0G2JMH3 177 aa9.51□□□□□ -0.89
CHMP1A-206ENST00000549139 C20orf202A1L168 122 aa9.51□□□□□ -0.89
CHMP1A-206ENST00000549139 ZNF861PO60384 105 aa9.51□□□□□ -0.89
CHMP1A-206ENST00000549139 ARL17AQ8IVW1 177 aa9.51□□□□□ -0.89
CHMP1A-206ENST00000549139 HIST3H2BBQ8N257 126 aa9.51□□□□□ -0.89
CHMP1A-206ENST00000549139 H0Y9J4 135 aa9.5□□□□□ -0.89
CHMP1A-206ENST00000549139 BCE1O60756 84 aa9.5□□□□□ -0.89
CHMP1A-206ENST00000549139 S100A6P06703 90 aa9.5□□□□□ -0.89
CHMP1A-206ENST00000549139 AKR1D1P51857 326 aa9.5□□□□□ -0.89
CHMP1A-206ENST00000549139 A0A0J9YXY3 114 aa9.49□□□□□ -0.89
CHMP1A-206ENST00000549139 S100A2P29034 98 aa9.49□□□□□ -0.89
CHMP1A-206ENST00000549139 BOD1L2Q8IYS8 172 aa9.49□□□□□ -0.89
CHMP1A-206ENST00000549139 FAT4Q6V0I7 4981 aa9.48□□□□□ -0.89
CHMP1A-206ENST00000549139 IGKV2-28A0A075B6P5 120 aa9.48□□□□□ -0.89
CHMP1A-206ENST00000549139 M0R378 163 aa9.48□□□□□ -0.89
CHMP1A-206ENST00000549139 IGKV2D-28P01615 120 aa9.48□□□□□ -0.89
CHMP1A-206ENST00000549139 HIST1H2BLQ99880 126 aa9.48□□□□□ -0.89
CHMP1A-206ENST00000549139 IGKV2D-26A0A0A0MRZ7 120 aa9.47□□□□□ -0.89
CHMP1A-206ENST00000549139 DAND5Q8N907 189 aa9.47□□□□□ -0.89
CHMP1A-206ENST00000549139 RPL28P46779 137 aaKnown RBP9.46□□□□□ -0.9
CHMP1A-206ENST00000549139 SNRPEP62304 92 aaKnown RBP9.44□□□□□ -0.9
CHMP1A-206ENST00000549139 ADAMTSL4-AS1Q5T5F5 129 aa9.44□□□□□ -0.9
CHMP1A-206ENST00000549139 TMEM126AQ9H061 195 aa9.44□□□□□ -0.9
CHMP1A-206ENST00000549139 ZNF815PA8K554 130 aa9.43□□□□□ -0.9
CHMP1A-206ENST00000549139 TIMM17BO60830 172 aa9.43□□□□□ -0.9
CHMP1A-206ENST00000549139 KRTAP13-1Q8IUC0 172 aa9.43□□□□□ -0.9
CHMP1A-206ENST00000549139 ATOH7Q8N100 152 aa9.43□□□□□ -0.9
CHMP1A-206ENST00000549139 MIEN1Q9BRT3 115 aa9.43□□□□□ -0.9
CHMP1A-206ENST00000549139 TRBV10-2A0A0K0K1G8 114 aa9.42□□□□□ -0.9
CHMP1A-206ENST00000549139 C5orf52A6NGY3 159 aa9.42□□□□□ -0.9
CHMP1A-206ENST00000549139 TMEM238C9JI98 176 aa9.42□□□□□ -0.9
CHMP1A-206ENST00000549139 NCR3O14931 201 aa9.42□□□□□ -0.9
CHMP1A-206ENST00000549139 NDUFC2O95298 119 aa9.42□□□□□ -0.9
CHMP1A-206ENST00000549139 UBE2AP49459 152 aa9.42□□□□□ -0.9
CHMP1A-206ENST00000549139 ANKRD39Q53RE8 183 aa9.42□□□□□ -0.9
CHMP1A-206ENST00000549139 TTTY13Q9BZ97 58 aa9.42□□□□□ -0.9
CHMP1A-206ENST00000549139 KRTAP1-4P0C5Y4 121 aa9.41□□□□□ -0.9
CHMP1A-206ENST00000549139 FAM19A1Q7Z5A9 133 aa9.41□□□□□ -0.9
CHMP1A-206ENST00000549139 LITAFQ99732 161 aa9.41□□□□□ -0.9
CHMP1A-206ENST00000549139 KRTAP9-6A0A140TA67 174 aa9.4□□□□□ -0.9
CHMP1A-206ENST00000549139 SOSTDC1Q6X4U4 206 aa9.4□□□□□ -0.9
CHMP1A-206ENST00000549139 KCNQ1DNQ9H478 68 aa9.4□□□□□ -0.9
CHMP1A-206ENST00000549139 PRYO14603 147 aa9.39□□□□□ -0.91
CHMP1A-206ENST00000549139 SPANXB1Q9NS25 103 aaPredicted RBP9.39□□□□□ -0.91
CHMP1A-206ENST00000549139 TRBV10-3A0A0K0K1G6 114 aa9.38□□□□□ -0.91
CHMP1A-206ENST00000549139 EIF4EBP3O60516 100 aaPredicted RBP9.38□□□□□ -0.91
CHMP1A-206ENST00000549139 NPC2P61916 151 aa9.38□□□□□ -0.91
CHMP1A-206ENST00000549139 SPRR1AP35321 89 aa9.37□□□□□ -0.91
CHMP1A-206ENST00000549139 S100A12P80511 92 aa9.37□□□□□ -0.91
CHMP1A-206ENST00000549139 PRLHP81277 87 aa9.37□□□□□ -0.91
CHMP1A-206ENST00000549139 PRR26Q8N8Z3 221 aa9.37□□□□□ -0.91
CHMP1A-206ENST00000549139 LINC00308Q8TCZ7 52 aa9.37□□□□□ -0.91
CHMP1A-206ENST00000549139 DDTP30046 118 aa9.36□□□□□ -0.91
CHMP1A-206ENST00000549139 SCGB1D4Q6XE38 83 aa9.36□□□□□ -0.91
CHMP1A-206ENST00000549139 LCE2AQ5TA79 106 aaPredicted RBP9.35□□□□□ -0.91
CHMP1A-206ENST00000549139 PCP2Q8IVA1 136 aa9.35□□□□□ -0.91
CHMP1A-206ENST00000549139 LINC00337Q8N6G1 96 aa9.35□□□□□ -0.91
CHMP1A-206ENST00000549139 HSBP1L1C9JCN9 74 aa9.34□□□□□ -0.91
CHMP1A-206ENST00000549139 S100A7L2Q5SY68 101 aa9.34□□□□□ -0.91
CHMP1A-206ENST00000549139 SPANXDQ9BXN6 97 aa9.34□□□□□ -0.91
CHMP1A-206ENST00000549139 SPANXCQ9NY87 97 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms