RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 MAP1LC3CQ9BXW4 147 aa5.71□□□□□ -1.5
GCN1-205ENST00000548821 SND1-IT1Q9HBX3 110 aa5.71□□□□□ -1.5
GCN1-205ENST00000548821 ZNF22P17026 224 aaPredicted RBP5.7□□□□□ -1.5
GCN1-205ENST00000548821 LINC00158P58513 81 aa5.7□□□□□ -1.5
GCN1-205ENST00000548821 CBLN2Q8IUK8 224 aa5.7□□□□□ -1.5
GCN1-205ENST00000548821 LINC00304Q8N9R0 145 aa5.7□□□□□ -1.5
GCN1-205ENST00000548821 C18orf32Q8TCD1 76 aa5.7□□□□□ -1.5
GCN1-205ENST00000548821 CHCHD1Q96BP2 118 aaKnown RBP5.7□□□□□ -1.5
GCN1-205ENST00000548821 TMEM126AQ9H061 195 aa5.7□□□□□ -1.5
GCN1-205ENST00000548821 CHTOPQ9Y3Y2 248 aaKnown RBP5.7□□□□□ -1.5
GCN1-205ENST00000548821 M0R378 163 aa5.69□□□□□ -1.5
GCN1-205ENST00000548821 HERV-K104P63124 156 aa5.69□□□□□ -1.5
GCN1-205ENST00000548821 TRAV12-1A0A0B4J245 112 aa5.68□□□□□ -1.5
GCN1-205ENST00000548821 VPREB1P12018 145 aa5.68□□□□□ -1.5
GCN1-205ENST00000548821 A0A087X002 238 aa5.67□□□□□ -1.5
GCN1-205ENST00000548821 APOC3P02656 99 aa5.67□□□□□ -1.5
GCN1-205ENST00000548821 IFITM2Q01629 132 aa5.67□□□□□ -1.5
GCN1-205ENST00000548821 MEIG1Q5JSS6 88 aa5.67□□□□□ -1.5
GCN1-205ENST00000548821 KRTAP13-1Q8IUC0 172 aa5.67□□□□□ -1.5
GCN1-205ENST00000548821 ZNF625Q96I27 306 aaPredicted RBP5.67□□□□□ -1.5
GCN1-205ENST00000548821 MYMXA0A1B0GTQ4 84 aa5.66□□□□□ -1.5
GCN1-205ENST00000548821 IFI27L1Q96BM0 104 aa5.66□□□□□ -1.5
GCN1-205ENST00000548821 CDIP1Q9H305 208 aa5.66□□□□□ -1.5
GCN1-205ENST00000548821 C11orf86A6NJI1 115 aa5.65□□□□□ -1.5
GCN1-205ENST00000548821 PRYO14603 147 aa5.65□□□□□ -1.5
GCN1-205ENST00000548821 HSBP1O75506 76 aa5.65□□□□□ -1.5
GCN1-205ENST00000548821 PLEKHB2Q96CS7 222 aa5.65□□□□□ -1.5
GCN1-205ENST00000548821 HIGD2AQ9BW72 106 aa5.65□□□□□ -1.5
GCN1-205ENST00000548821 CBY1Q9Y3M2 126 aa5.65□□□□□ -1.5
GCN1-205ENST00000548821 A0A096LNJ9 63 aa5.64□□□□□ -1.51
GCN1-205ENST00000548821 TMEM223A0PJW6 202 aa5.64□□□□□ -1.51
GCN1-205ENST00000548821 PRLHP81277 87 aa5.64□□□□□ -1.51
GCN1-205ENST00000548821 PMCHL1Q16048 86 aa5.64□□□□□ -1.51
GCN1-205ENST00000548821 ETDCA0A1B0GVM5 59 aa5.63□□□□□ -1.51
GCN1-205ENST00000548821 TMEM238C9JI98 176 aa5.63□□□□□ -1.51
GCN1-205ENST00000548821 HERVK_113P61574 105 aa5.63□□□□□ -1.51
GCN1-205ENST00000548821 TPRXLQ17RH7 258 aa5.63□□□□□ -1.51
GCN1-205ENST00000548821 BOD1L2Q8IYS8 172 aa5.63□□□□□ -1.51
GCN1-205ENST00000548821 LINC00337Q8N6G1 96 aa5.63□□□□□ -1.51
GCN1-205ENST00000548821 MIEN1Q9BRT3 115 aa5.63□□□□□ -1.51
GCN1-205ENST00000548821 ANAPC11Q9NYG5 84 aa5.63□□□□□ -1.51
GCN1-205ENST00000548821 NDUFA12Q9UI09 145 aa5.63□□□□□ -1.51
GCN1-205ENST00000548821 IGLV7-46A0A075B6I9 117 aa5.62□□□□□ -1.51
GCN1-205ENST00000548821 PLNP26678 52 aa5.62□□□□□ -1.51
GCN1-205ENST00000548821 KRTAP13-2Q52LG2 175 aa5.62□□□□□ -1.51
GCN1-205ENST00000548821 FP248Q71RG6 208 aaPredicted RBP5.62□□□□□ -1.51
GCN1-205ENST00000548821 URB1-AS1Q96HZ7 61 aa5.62□□□□□ -1.51
GCN1-205ENST00000548821 SCO1O75880 301 aa5.61□□□□□ -1.51
GCN1-205ENST00000548821 SPINK1P00995 79 aa5.61□□□□□ -1.51
GCN1-205ENST00000548821 NMUP48645 174 aa5.61□□□□□ -1.51
GCN1-205ENST00000548821 JOSD1Q15040 202 aaPredicted RBP5.61□□□□□ -1.51
GCN1-205ENST00000548821 KCNQ1DNQ9H478 68 aa5.61□□□□□ -1.51
GCN1-205ENST00000548821 HSPB8Q9UJY1 196 aa5.61□□□□□ -1.51
GCN1-205ENST00000548821 TRBV10-2A0A0K0K1G8 114 aa5.6□□□□□ -1.51
GCN1-205ENST00000548821 A0A0U1RRA0 63 aa5.6□□□□□ -1.51
GCN1-205ENST00000548821 EIF4EBP3O60516 100 aaPredicted RBP5.6□□□□□ -1.51
GCN1-205ENST00000548821 LEPROTL1O95214 131 aa5.6□□□□□ -1.51
GCN1-205ENST00000548821 SMIM13P0DJ93 91 aa5.6□□□□□ -1.51
GCN1-205ENST00000548821 HINT1P49773 126 aaPredicted RBP5.6□□□□□ -1.51
GCN1-205ENST00000548821 FAM19A2Q8N3H0 131 aa5.6□□□□□ -1.51
GCN1-205ENST00000548821 MIR7-3HGQ8N6C7 128 aa5.6□□□□□ -1.51
GCN1-205ENST00000548821 SPRR4Q96PI1 79 aa5.6□□□□□ -1.51
GCN1-205ENST00000548821 LEPROTO15243 131 aa5.58□□□□□ -1.52
GCN1-205ENST00000548821 S100A7L2Q5SY68 101 aa5.58□□□□□ -1.52
GCN1-205ENST00000548821 SSBP3-AS1Q7Z2R9 100 aa5.58□□□□□ -1.52
GCN1-205ENST00000548821 PPDPFQ9H3Y8 114 aa5.58□□□□□ -1.52
GCN1-205ENST00000548821 LOC107984156A0A0G2JMH3 177 aa5.57□□□□□ -1.52
GCN1-205ENST00000548821 C5orf52A6NGY3 159 aa5.57□□□□□ -1.52
GCN1-205ENST00000548821 NCR3O14931 201 aa5.57□□□□□ -1.52
GCN1-205ENST00000548821 LGALS3P17931 250 aaKnown RBP5.57□□□□□ -1.52
GCN1-205ENST00000548821 SPRR1AP35321 89 aa5.57□□□□□ -1.52
GCN1-205ENST00000548821 ARL17AQ8IVW1 177 aa5.57□□□□□ -1.52
GCN1-205ENST00000548821 SMCR5Q8TEV8 140 aa5.57□□□□□ -1.52
GCN1-205ENST00000548821 LPAP08519 4548 aa5.56□□□□□ -1.52
GCN1-205ENST00000548821 H0Y8G0 127 aa5.56□□□□□ -1.52
GCN1-205ENST00000548821 DPM2O94777 84 aa5.56□□□□□ -1.52
GCN1-205ENST00000548821 NDUFC2O95298 119 aa5.56□□□□□ -1.52
GCN1-205ENST00000548821 DDTP30046 118 aa5.56□□□□□ -1.52
GCN1-205ENST00000548821 RPS29P62273 56 aaKnown RBP5.56□□□□□ -1.52
GCN1-205ENST00000548821 RETNLBQ9BQ08 111 aa5.56□□□□□ -1.52
GCN1-205ENST00000548821 SPANXB1Q9NS25 103 aaPredicted RBP5.56□□□□□ -1.52
GCN1-205ENST00000548821 J3QQQ9 107 aa5.55□□□□□ -1.52
GCN1-205ENST00000548821 SLC25A34Q6PIV7 304 aa5.55□□□□□ -1.52
GCN1-205ENST00000548821 C3orf22Q8N5N4 141 aa5.55□□□□□ -1.52
GCN1-205ENST00000548821 TRBV10-3A0A0K0K1G6 114 aa5.54□□□□□ -1.52
GCN1-205ENST00000548821 IGKCP01834 107 aa5.54□□□□□ -1.52
GCN1-205ENST00000548821 LINC00483Q53H64 154 aa5.54□□□□□ -1.52
GCN1-205ENST00000548821 GAGE2AQ6NT46 116 aa5.54□□□□□ -1.52
GCN1-205ENST00000548821 DAND5Q8N907 189 aa5.54□□□□□ -1.52
GCN1-205ENST00000548821 Q8NBF4 154 aa5.54□□□□□ -1.52
GCN1-205ENST00000548821 SLC25A20O43772 301 aa5.53□□□□□ -1.52
GCN1-205ENST00000548821 TRGC2P03986 189 aa5.53□□□□□ -1.52
GCN1-205ENST00000548821 Q8NDZ9 215 aa5.53□□□□□ -1.52
GCN1-205ENST00000548821 B5MCH6 92 aa5.52□□□□□ -1.53
GCN1-205ENST00000548821 KRTAP4-16G5E9R7 235 aaPredicted RBP5.52□□□□□ -1.53
GCN1-205ENST00000548821 SEC61BP60468 96 aaKnown RBP5.52□□□□□ -1.53
GCN1-205ENST00000548821 Q6ZRX8 168 aa5.52□□□□□ -1.53
GCN1-205ENST00000548821 COPS9Q8WXC6 57 aa5.52□□□□□ -1.53
GCN1-205ENST00000548821 YPEL4Q96NS1 127 aa5.52□□□□□ -1.53
GCN1-205ENST00000548821 MUC2Q02817 5179 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms