RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 GVQW2A0A096LPI5 108 aaPredicted RBP12.41□□□□□ -0.42
PRPF40B-208ENST00000548436 INAFM2P0DMQ5 153 aa12.41□□□□□ -0.42
PRPF40B-208ENST00000548436 MUC7Q8TAX7 377 aa12.41□□□□□ -0.42
PRPF40B-208ENST00000548436 DEFB131BA0A096LNP1 70 aa12.39□□□□□ -0.43
PRPF40B-208ENST00000548436 Q6Q795 121 aa12.39□□□□□ -0.43
PRPF40B-208ENST00000548436 C11orf45Q8TAV5 145 aa12.39□□□□□ -0.43
PRPF40B-208ENST00000548436 SMCR5Q8TEV8 140 aa12.39□□□□□ -0.43
PRPF40B-208ENST00000548436 OBSCN-AS1Q96MR7 158 aa12.38□□□□□ -0.43
PRPF40B-208ENST00000548436 LINC00167Q96N53 147 aa12.38□□□□□ -0.43
PRPF40B-208ENST00000548436 S100A7L2Q5SY68 101 aa12.38□□□□□ -0.43
PRPF40B-208ENST00000548436 Q8N814 137 aa12.38□□□□□ -0.43
PRPF40B-208ENST00000548436 COL6A5A8TX70 2615 aa12.37□□□□□ -0.43
PRPF40B-208ENST00000548436 HIGD2BQ4VC39 106 aa12.37□□□□□ -0.43
PRPF40B-208ENST00000548436 C6orf99Q4VX62 202 aa12.37□□□□□ -0.43
PRPF40B-208ENST00000548436 ORMDL1Q9P0S3 153 aa12.37□□□□□ -0.43
PRPF40B-208ENST00000548436 GAGE2AQ6NT46 116 aa12.36□□□□□ -0.43
PRPF40B-208ENST00000548436 C14orf132Q9NPU4 83 aa12.36□□□□□ -0.43
PRPF40B-208ENST00000548436 A0A1B0GX51 115 aa12.36□□□□□ -0.43
PRPF40B-208ENST00000548436 SDIM1Q6ZPB5 146 aa12.35□□□□□ -0.43
PRPF40B-208ENST00000548436 ZNF561-AS1K7EIQ3 104 aa12.34□□□□□ -0.43
PRPF40B-208ENST00000548436 RPL18AQ02543 176 aaKnown RBP12.34□□□□□ -0.43
PRPF40B-208ENST00000548436 C15orf56Q8N910 161 aa12.34□□□□□ -0.43
PRPF40B-208ENST00000548436 XAGE1AQ9HD64 81 aa12.34□□□□□ -0.43
PRPF40B-208ENST00000548436 NOTCH1P46531 2555 aa12.33□□□□□ -0.43
PRPF40B-208ENST00000548436 IGLV6-57P01721 117 aa12.33□□□□□ -0.44
PRPF40B-208ENST00000548436 PRB2P02812 416 aaPredicted RBP12.33□□□□□ -0.44
PRPF40B-208ENST00000548436 LINC01556Q5JQF7 62 aa12.33□□□□□ -0.44
PRPF40B-208ENST00000548436 CAMK2N2Q96S95 79 aa12.33□□□□□ -0.44
PRPF40B-208ENST00000548436 NDUFV3P56181 108 aaKnown RBP12.32□□□□□ -0.44
PRPF40B-208ENST00000548436 ANAPC13Q9BS18 74 aa12.32□□□□□ -0.44
PRPF40B-208ENST00000548436 TRBV7-7A0A0K0K1E9 115 aa12.31□□□□□ -0.44
PRPF40B-208ENST00000548436 NHLRC4P0CG21 123 aaPredicted RBP12.31□□□□□ -0.44
PRPF40B-208ENST00000548436 Q6ZRU5 148 aa12.3□□□□□ -0.44
PRPF40B-208ENST00000548436 LINC00643Q86TS7 51 aa12.3□□□□□ -0.44
PRPF40B-208ENST00000548436 LINC00575Q6W349 94 aa12.3□□□□□ -0.44
PRPF40B-208ENST00000548436 MDFIQ99750 246 aa12.3□□□□□ -0.44
PRPF40B-208ENST00000548436 C1orf43Q9BWL3 253 aa12.3□□□□□ -0.44
PRPF40B-208ENST00000548436 TRBV10-3A0A0K0K1G6 114 aa12.28□□□□□ -0.44
PRPF40B-208ENST00000548436 IGKV2D-24A0A075B6R9 120 aa12.27□□□□□ -0.45
PRPF40B-208ENST00000548436 TMEM256-PLSCR3K7ERE1 68 aa12.26□□□□□ -0.45
PRPF40B-208ENST00000548436 C2orf48Q96LS8 159 aa12.26□□□□□ -0.45
PRPF40B-208ENST00000548436 DNAH10OSP0CZ25 163 aa12.25□□□□□ -0.45
PRPF40B-208ENST00000548436 hADV29S1A0JD25 119 aa12.24□□□□□ -0.45
PRPF40B-208ENST00000548436 VPREB1P12018 145 aa12.24□□□□□ -0.45
PRPF40B-208ENST00000548436 TM2D3Q9BRN9 247 aa12.23□□□□□ -0.45
PRPF40B-208ENST00000548436 IMUPQ9GZP8 106 aa12.23□□□□□ -0.45
PRPF40B-208ENST00000548436 NBEAL1Q6ZS30 2694 aa12.23□□□□□ -0.45
PRPF40B-208ENST00000548436 TRAV23DV6A0A075B6W5 121 aa12.23□□□□□ -0.45
PRPF40B-208ENST00000548436 TRAV10A0A0B4J240 114 aa12.23□□□□□ -0.45
PRPF40B-208ENST00000548436 NDUFC2-KCTD14E9PQ53 114 aa12.23□□□□□ -0.45
PRPF40B-208ENST00000548436 KRTAP21-3Q3LHN1 58 aa12.23□□□□□ -0.45
PRPF40B-208ENST00000548436 MRAPQ8TCY5 172 aa12.23□□□□□ -0.45
PRPF40B-208ENST00000548436 LINC00846Q9NV44 126 aa12.23□□□□□ -0.45
PRPF40B-208ENST00000548436 HUWE1Q7Z6Z7 4374 aaKnown RBP12.22□□□□□ -0.45
PRPF40B-208ENST00000548436 JMJD7-PLA2G4BH0Y9G9 81 aa12.22□□□□□ -0.45
PRPF40B-208ENST00000548436 K7EIL1 84 aa12.22□□□□□ -0.45
PRPF40B-208ENST00000548436 LINC00588Q9Y4M8 146 aa12.21□□□□□ -0.45
PRPF40B-208ENST00000548436 CCKP06307 115 aa12.2□□□□□ -0.46
PRPF40B-208ENST00000548436 Q6ZRP5 223 aa12.2□□□□□ -0.46
PRPF40B-208ENST00000548436 DIRC1Q969H9 104 aa12.2□□□□□ -0.46
PRPF40B-208ENST00000548436 ZNF73O43830 326 aaPredicted RBP12.18□□□□□ -0.46
PRPF40B-208ENST00000548436 SYCNQ0VAF6 134 aa12.18□□□□□ -0.46
PRPF40B-208ENST00000548436 F8WDY8 70 aa12.17□□□□□ -0.46
PRPF40B-208ENST00000548436 M0R378 163 aa12.17□□□□□ -0.46
PRPF40B-208ENST00000548436 FAM236AA0A1B0GUQ0 79 aa12.16□□□□□ -0.46
PRPF40B-208ENST00000548436 FAM236BA0A1B0GV22 79 aa12.16□□□□□ -0.46
PRPF40B-208ENST00000548436 Q6ZQY7 126 aa12.16□□□□□ -0.46
PRPF40B-208ENST00000548436 DNAH1Q9P2D7 4330 aa12.14□□□□□ -0.47
PRPF40B-208ENST00000548436 COX7BP24311 80 aa12.14□□□□□ -0.47
PRPF40B-208ENST00000548436 ELOF1P60002 83 aaKnown RBP12.14□□□□□ -0.47
PRPF40B-208ENST00000548436 CCDC179H3BU77 68 aa12.13□□□□□ -0.47
PRPF40B-208ENST00000548436 CASC10Q5T4H9 136 aa12.13□□□□□ -0.47
PRPF40B-208ENST00000548436 IGKV3D-7A0A0C4DH55 119 aa12.12□□□□□ -0.47
PRPF40B-208ENST00000548436 TRBV7-6A0A0J9YX20 115 aa12.12□□□□□ -0.47
PRPF40B-208ENST00000548436 Q6JHZ5 121 aa12.12□□□□□ -0.47
PRPF40B-208ENST00000548436 LAMTOR3Q9UHA4 124 aa12.11□□□□□ -0.47
PRPF40B-208ENST00000548436 RBM3P98179 157 aaKnown RBP12.1□□□□□ -0.47
PRPF40B-208ENST00000548436 USP17L23D6RBM5 183 aa12.09□□□□□ -0.47
PRPF40B-208ENST00000548436 Q6ZQT0 140 aa12.09□□□□□ -0.47
PRPF40B-208ENST00000548436 SERTAD4-AS1Q5TG53 156 aa12.08□□□□□ -0.48
PRPF40B-208ENST00000548436 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.08□□□□□ -0.48
PRPF40B-208ENST00000548436 LINC00528Q8N1L1 170 aa12.07□□□□□ -0.48
PRPF40B-208ENST00000548436 LOC110117498A0A087WWA1 95 aa12.06□□□□□ -0.48
PRPF40B-208ENST00000548436 TLX1NBP0CAT3 122 aa12.06□□□□□ -0.48
PRPF40B-208ENST00000548436 MGAM2Q2M2H8 2515 aa12.06□□□□□ -0.48
PRPF40B-208ENST00000548436 B5MCH6 92 aa12.06□□□□□ -0.48
PRPF40B-208ENST00000548436 H3BQ85 93 aa12.06□□□□□ -0.48
PRPF40B-208ENST00000548436 UPK3BQ9BT76 320 aa12.05□□□□□ -0.48
PRPF40B-208ENST00000548436 M0R2N4 97 aa12.04□□□□□ -0.48
PRPF40B-208ENST00000548436 HIST1H4AP62805 103 aaKnown RBP12.04□□□□□ -0.48
PRPF40B-208ENST00000548436 NKAPP1Q8N9T2 125 aa12.04□□□□□ -0.48
PRPF40B-208ENST00000548436 COL7A1Q02388 2944 aa12.04□□□□□ -0.48
PRPF40B-208ENST00000548436 DNHD1Q96M86 4753 aa12.04□□□□□ -0.48
PRPF40B-208ENST00000548436 C7orf33Q8WU49 177 aa12.03□□□□□ -0.48
PRPF40B-208ENST00000548436 RMI2Q96E14 147 aa12.02□□□□□ -0.49
PRPF40B-208ENST00000548436 DSCR8Q96T75 97 aa12.02□□□□□ -0.49
PRPF40B-208ENST00000548436 KCNQ1DNQ9H478 68 aa12.02□□□□□ -0.49
PRPF40B-208ENST00000548436 LYSTQ99698 3801 aa12.01□□□□□ -0.49
PRPF40B-208ENST00000548436 A0A087WVE0 104 aa12.01□□□□□ -0.49
PRPF40B-208ENST00000548436 FAM168BA1KXE4 195 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms