RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 TMEM262E9PQX1 116 aa1.75□□□□□ -2.13
SNHG1-222ENST00000545308 SFTA3P0C7M3 94 aa1.75□□□□□ -2.13
SNHG1-222ENST00000545308 SLC25A6P12236 298 aa1.75□□□□□ -2.13
SNHG1-222ENST00000545308 AKR1C3P42330 323 aa1.75□□□□□ -2.13
SNHG1-222ENST00000545308 PDE6HQ13956 83 aa1.75□□□□□ -2.13
SNHG1-222ENST00000545308 CIRBPQ14011 172 aaKnown RBP1.75□□□□□ -2.13
SNHG1-222ENST00000545308 ZNF345Q14585 488 aa1.75□□□□□ -2.13
SNHG1-222ENST00000545308 SURF2Q15527 256 aaPredicted RBP1.75□□□□□ -2.13
SNHG1-222ENST00000545308 RNASE10Q5GAN6 216 aaKnown RBP1.75□□□□□ -2.13
SNHG1-222ENST00000545308 CYP2G1PQ6ZSU1 146 aa1.75□□□□□ -2.13
SNHG1-222ENST00000545308 LINC00305Q7Z4B0 112 aa1.75□□□□□ -2.13
SNHG1-222ENST00000545308 TP53RKQ96S44 253 aa1.75□□□□□ -2.13
SNHG1-222ENST00000545308 PFDN5Q99471 154 aa1.75□□□□□ -2.13
SNHG1-222ENST00000545308 PLAC8Q9NZF1 115 aa1.75□□□□□ -2.13
SNHG1-222ENST00000545308 RBAKDNA6NC62 111 aa1.74□□□□□ -2.13
SNHG1-222ENST00000545308 MAP1LC3B2A6NCE7 125 aa1.74□□□□□ -2.13
SNHG1-222ENST00000545308 A8MWV9 139 aa1.74□□□□□ -2.13
SNHG1-222ENST00000545308 TSTD3H0UI37 97 aa1.74□□□□□ -2.13
SNHG1-222ENST00000545308 CNBPP62633 177 aaKnown RBP1.74□□□□□ -2.13
SNHG1-222ENST00000545308 SSBP1Q04837 148 aaKnown RBP1.74□□□□□ -2.13
SNHG1-222ENST00000545308 WFDC2Q14508 124 aa1.74□□□□□ -2.13
SNHG1-222ENST00000545308 FAM74A1Q5RGS3 127 aa1.74□□□□□ -2.13
SNHG1-222ENST00000545308 C10orf113Q5VZT2 155 aa1.74□□□□□ -2.13
SNHG1-222ENST00000545308 EIF5AL1Q6IS14 154 aaKnown RBP1.74□□□□□ -2.13
SNHG1-222ENST00000545308 AKAP14Q86UN6 197 aa1.74□□□□□ -2.13
SNHG1-222ENST00000545308 TSKUQ8WUA8 353 aa1.74□□□□□ -2.13
SNHG1-222ENST00000545308 DIRC1Q969H9 104 aa1.74□□□□□ -2.13
SNHG1-222ENST00000545308 GGACTQ9BVM4 153 aa1.74□□□□□ -2.13
SNHG1-222ENST00000545308 MAP1LC3BQ9GZQ8 125 aa1.74□□□□□ -2.13
SNHG1-222ENST00000545308 FXYD6Q9H0Q3 95 aa1.74□□□□□ -2.13
SNHG1-222ENST00000545308 LAMTOR3Q9UHA4 124 aa1.74□□□□□ -2.13
SNHG1-222ENST00000545308 TRAV21A0A0B4J279 112 aa1.73□□□□□ -2.13
SNHG1-222ENST00000545308 ANGP03950 147 aaKnown RBP1.73□□□□□ -2.13
SNHG1-222ENST00000545308 SDC2P34741 201 aa1.73□□□□□ -2.13
SNHG1-222ENST00000545308 UBE2D1P51668 147 aa1.73□□□□□ -2.13
SNHG1-222ENST00000545308 Q6AWC8 147 aa1.73□□□□□ -2.13
SNHG1-222ENST00000545308 EXOC3-AS1Q8N2X6 119 aa1.73□□□□□ -2.13
SNHG1-222ENST00000545308 SLC25A21Q9BQT8 299 aaPredicted RBP1.73□□□□□ -2.13
SNHG1-222ENST00000545308 CCDC32Q9BV29 185 aa1.73□□□□□ -2.13
SNHG1-222ENST00000545308 AGPAT4-IT1Q9H0P7 198 aa1.73□□□□□ -2.13
SNHG1-222ENST00000545308 NAA60Q9H7X0 242 aa1.73□□□□□ -2.13
SNHG1-222ENST00000545308 OR5AC2Q9NZP5 309 aa1.73□□□□□ -2.13
SNHG1-222ENST00000545308 SCP2D1Q9UJQ7 156 aa1.73□□□□□ -2.13
SNHG1-222ENST00000545308 FAT4Q6V0I7 4981 aa1.73□□□□□ -2.13
SNHG1-222ENST00000545308 F8W036 122 aa1.72□□□□□ -2.13
SNHG1-222ENST00000545308 TMEM256-PLSCR3K7ERE1 68 aa1.72□□□□□ -2.13
SNHG1-222ENST00000545308 TIMM17BO60830 172 aa1.72□□□□□ -2.13
SNHG1-222ENST00000545308 S100A10P60903 97 aa1.72□□□□□ -2.13
SNHG1-222ENST00000545308 MRPS10P82664 201 aaKnown RBP1.72□□□□□ -2.13
SNHG1-222ENST00000545308 CFAP126Q5VTH2 177 aa1.72□□□□□ -2.13
SNHG1-222ENST00000545308 Q6ZQT0 140 aa1.72□□□□□ -2.13
SNHG1-222ENST00000545308 TMEM229BQ8NBD8 167 aa1.72□□□□□ -2.13
SNHG1-222ENST00000545308 OR5H6Q8NGV6 325 aa1.72□□□□□ -2.13
SNHG1-222ENST00000545308 NPCDR1Q9BY65 106 aa1.72□□□□□ -2.13
SNHG1-222ENST00000545308 PSENENQ9NZ42 101 aa1.72□□□□□ -2.13
SNHG1-222ENST00000545308 TMEM14CQ9P0S9 112 aa1.72□□□□□ -2.13
SNHG1-222ENST00000545308 MUC2Q02817 5179 aa1.71□□□□□ -2.13
SNHG1-222ENST00000545308 TRBV7-3A0A075B6L6 115 aa1.71□□□□□ -2.14
SNHG1-222ENST00000545308 TRBV10-1A0A0K0K1A3 114 aa1.71□□□□□ -2.14
SNHG1-222ENST00000545308 MT-ND6P03923 174 aa1.71□□□□□ -2.14
SNHG1-222ENST00000545308 CD3DP04234 171 aa1.71□□□□□ -2.14
SNHG1-222ENST00000545308 NBEAP1P0C6P0 100 aa1.71□□□□□ -2.14
SNHG1-222ENST00000545308 AKAIN1P0CW23 69 aa1.71□□□□□ -2.14
SNHG1-222ENST00000545308 IGLC2P0DOY2 106 aa1.71□□□□□ -2.14
SNHG1-222ENST00000545308 IAPPP10997 89 aa1.71□□□□□ -2.14
SNHG1-222ENST00000545308 KRTAP12-1P59990 96 aa1.71□□□□□ -2.14
SNHG1-222ENST00000545308 COX6A2Q02221 97 aa1.71□□□□□ -2.14
SNHG1-222ENST00000545308 KRTAP13-4Q3LI77 160 aa1.71□□□□□ -2.14
SNHG1-222ENST00000545308 PCOTHQ58A44 107 aa1.71□□□□□ -2.14
SNHG1-222ENST00000545308 TMEM128Q5BJH2 165 aa1.71□□□□□ -2.14
SNHG1-222ENST00000545308 ENHOQ6UWT2 76 aa1.71□□□□□ -2.14
SNHG1-222ENST00000545308 PATE2Q6UY27 113 aa1.71□□□□□ -2.14
SNHG1-222ENST00000545308 SOSTDC1Q6X4U4 206 aa1.71□□□□□ -2.14
SNHG1-222ENST00000545308 COA5Q86WW8 74 aa1.71□□□□□ -2.14
SNHG1-222ENST00000545308 NMES1Q9C002 83 aa1.71□□□□□ -2.14
SNHG1-222ENST00000545308 LPAP08519 4548 aa1.71□□□□□ -2.14
SNHG1-222ENST00000545308 TRBV6-8A0A0A6YYG3 113 aa1.7□□□□□ -2.14
SNHG1-222ENST00000545308 FAM25AB3EWG3 89 aa1.7□□□□□ -2.14
SNHG1-222ENST00000545308 FAM25CB3EWG5 89 aa1.7□□□□□ -2.14
SNHG1-222ENST00000545308 FAM25GB3EWG6 89 aa1.7□□□□□ -2.14
SNHG1-222ENST00000545308 H3BQ15 152 aa1.7□□□□□ -2.14
SNHG1-222ENST00000545308 TRGC2P03986 189 aa1.7□□□□□ -2.14
SNHG1-222ENST00000545308 BAALC-AS2P0C853 105 aa1.7□□□□□ -2.14
SNHG1-222ENST00000545308 FAUP35544 74 aaKnown RBP1.7□□□□□ -2.14
SNHG1-222ENST00000545308 TMBIM6P55061 237 aa1.7□□□□□ -2.14
SNHG1-222ENST00000545308 SNX29P2Q8IUI4 249 aa1.7□□□□□ -2.14
SNHG1-222ENST00000545308 OR2T35Q8NGX2 323 aa1.7□□□□□ -2.14
SNHG1-222ENST00000545308 COMMD3Q9UBI1 195 aa1.7□□□□□ -2.14
SNHG1-222ENST00000545308 TRBV25-1A0A075B6N4 114 aa1.69□□□□□ -2.14
SNHG1-222ENST00000545308 M0R3E3 92 aa1.69□□□□□ -2.14
SNHG1-222ENST00000545308 CST7O76096 145 aa1.69□□□□□ -2.14
SNHG1-222ENST00000545308 S100A11P31949 105 aa1.69□□□□□ -2.14
SNHG1-222ENST00000545308 KRTAP12-3P60328 96 aa1.69□□□□□ -2.14
SNHG1-222ENST00000545308 RRAS2P62070 204 aaPredicted RBP1.69□□□□□ -2.14
SNHG1-222ENST00000545308 TMEM254Q8TBM7 123 aa1.69□□□□□ -2.14
SNHG1-222ENST00000545308 PLEKHB2Q96CS7 222 aa1.69□□□□□ -2.14
SNHG1-222ENST00000545308 C14orf132Q9NPU4 83 aa1.69□□□□□ -2.14
SNHG1-222ENST00000545308 LAMTOR2Q9Y2Q5 125 aa1.69□□□□□ -2.14
SNHG1-222ENST00000545308 IGKV2-40A0A087WW87 121 aaPredicted RBP1.68□□□□□ -2.14
SNHG1-222ENST00000545308 LOC107984640A0A0U1RRK4 108 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms