RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 LGALS3P17931 250 aaKnown RBP7.85□□□□□ -1.15
ACTN1-206ENST00000544964 PFN2P35080 140 aa7.85□□□□□ -1.15
ACTN1-206ENST00000544964 SPACA4Q8TDM5 124 aa7.85□□□□□ -1.15
ACTN1-206ENST00000544964 LRP2P98164 4655 aa7.84□□□□□ -1.15
ACTN1-206ENST00000544964 AKR1D1P51857 326 aa7.84□□□□□ -1.15
ACTN1-206ENST00000544964 ERG28Q9UKR5 140 aa7.84□□□□□ -1.15
ACTN1-206ENST00000544964 TNXBP22105 4242 aa7.84□□□□□ -1.15
ACTN1-206ENST00000544964 A0A087WYN8 130 aa7.83□□□□□ -1.16
ACTN1-206ENST00000544964 A0A0U1RRA0 63 aa7.83□□□□□ -1.16
ACTN1-206ENST00000544964 MYMXA0A1B0GTQ4 84 aa7.83□□□□□ -1.16
ACTN1-206ENST00000544964 SFTA2Q6UW10 78 aa7.83□□□□□ -1.16
ACTN1-206ENST00000544964 TTTY13Q9BZ97 58 aa7.82□□□□□ -1.16
ACTN1-206ENST00000544964 XAGE1AQ9HD64 81 aa7.82□□□□□ -1.16
ACTN1-206ENST00000544964 LINC00474Q9P2X8 69 aa7.82□□□□□ -1.16
ACTN1-206ENST00000544964 FAM168BA1KXE4 195 aa7.81□□□□□ -1.16
ACTN1-206ENST00000544964 SMIM13P0DJ93 91 aa7.81□□□□□ -1.16
ACTN1-206ENST00000544964 NMUP48645 174 aa7.81□□□□□ -1.16
ACTN1-206ENST00000544964 LINC00158P58513 81 aa7.81□□□□□ -1.16
ACTN1-206ENST00000544964 HERV-K104P63124 156 aa7.81□□□□□ -1.16
ACTN1-206ENST00000544964 MEIG1Q5JSS6 88 aa7.81□□□□□ -1.16
ACTN1-206ENST00000544964 C9orf129Q5T035 196 aaKnown RBP7.81□□□□□ -1.16
ACTN1-206ENST00000544964 A0A1W2PNN7 141 aa7.8□□□□□ -1.16
ACTN1-206ENST00000544964 JOSD1Q15040 202 aaPredicted RBP7.8□□□□□ -1.16
ACTN1-206ENST00000544964 PLAC8Q9NZF1 115 aa7.8□□□□□ -1.16
ACTN1-206ENST00000544964 ZNF815PA8K554 130 aa7.79□□□□□ -1.16
ACTN1-206ENST00000544964 HSBP1L1C9JCN9 74 aa7.79□□□□□ -1.16
ACTN1-206ENST00000544964 COX17Q14061 63 aa7.79□□□□□ -1.16
ACTN1-206ENST00000544964 A0A0J9YXY3 114 aa7.78□□□□□ -1.16
ACTN1-206ENST00000544964 FAM19A5Q7Z5A7 132 aaPredicted RBP7.78□□□□□ -1.16
ACTN1-206ENST00000544964 PCP2Q8IVA1 136 aa7.78□□□□□ -1.16
ACTN1-206ENST00000544964 SND1-IT1Q9HBX3 110 aa7.78□□□□□ -1.16
ACTN1-206ENST00000544964 KRTAP7-1Q8IUC3 87 aa7.77□□□□□ -1.17
ACTN1-206ENST00000544964 PCP4P48539 62 aa7.76□□□□□ -1.17
ACTN1-206ENST00000544964 PYY3Q5JQD4 70 aa7.76□□□□□ -1.17
ACTN1-206ENST00000544964 MIR7-3HGQ8N6C7 128 aa7.76□□□□□ -1.17
ACTN1-206ENST00000544964 DAND5Q8N907 189 aa7.76□□□□□ -1.17
ACTN1-206ENST00000544964 LINC00587B1AMM8 73 aa7.75□□□□□ -1.17
ACTN1-206ENST00000544964 PRR3P79522 188 aaKnown RBP7.75□□□□□ -1.17
ACTN1-206ENST00000544964 ADAMTSL4-AS1Q5T5F5 129 aa7.74□□□□□ -1.17
ACTN1-206ENST00000544964 PHF5AQ7RTV0 110 aaKnown RBP7.74□□□□□ -1.17
ACTN1-206ENST00000544964 VAMP8Q9BV40 100 aa7.74□□□□□ -1.17
ACTN1-206ENST00000544964 PAM16Q9Y3D7 125 aa7.74□□□□□ -1.17
ACTN1-206ENST00000544964 M0QXV9 152 aa7.73□□□□□ -1.17
ACTN1-206ENST00000544964 NPC2P61916 151 aa7.73□□□□□ -1.17
ACTN1-206ENST00000544964 SPATA45Q537H7 98 aa7.73□□□□□ -1.17
ACTN1-206ENST00000544964 C7orf33Q8WU49 177 aa7.73□□□□□ -1.17
ACTN1-206ENST00000544964 TP73-AS1Q9UF72 201 aa7.73□□□□□ -1.17
ACTN1-206ENST00000544964 SCGB1D4Q6XE38 83 aa7.72□□□□□ -1.17
ACTN1-206ENST00000544964 Q8NDZ9 215 aa7.72□□□□□ -1.17
ACTN1-206ENST00000544964 LITAFQ99732 161 aa7.72□□□□□ -1.17
ACTN1-206ENST00000544964 C22orf24Q9Y442 160 aa7.72□□□□□ -1.17
ACTN1-206ENST00000544964 RNF213Q63HN8 5207 aa7.7□□□□□ -1.18
ACTN1-206ENST00000544964 TIMM17BO60830 172 aa7.7□□□□□ -1.18
ACTN1-206ENST00000544964 VPREB1P12018 145 aa7.7□□□□□ -1.18
ACTN1-206ENST00000544964 BOD1L2Q8IYS8 172 aa7.7□□□□□ -1.18
ACTN1-206ENST00000544964 C14orf144Q96I85 54 aa7.7□□□□□ -1.18
ACTN1-206ENST00000544964 LINC01600Q96MT4 127 aa7.7□□□□□ -1.18
ACTN1-206ENST00000544964 EIF4EBP3O60516 100 aaPredicted RBP7.69□□□□□ -1.18
ACTN1-206ENST00000544964 COX8AP10176 69 aa7.69□□□□□ -1.18
ACTN1-206ENST00000544964 SOSTDC1Q6X4U4 206 aa7.69□□□□□ -1.18
ACTN1-206ENST00000544964 KRTAP11-1Q8IUC1 163 aa7.69□□□□□ -1.18
ACTN1-206ENST00000544964 NKAPP1Q8N9T2 125 aa7.69□□□□□ -1.18
ACTN1-206ENST00000544964 IGLV5-37A0A075B6J1 123 aa7.68□□□□□ -1.18
ACTN1-206ENST00000544964 GAGE10A6NGK3 116 aa7.68□□□□□ -1.18
ACTN1-206ENST00000544964 TMEM238C9JI98 176 aa7.68□□□□□ -1.18
ACTN1-206ENST00000544964 UBE2BP63146 152 aa7.68□□□□□ -1.18
ACTN1-206ENST00000544964 RPL24P83731 157 aaKnown RBP7.68□□□□□ -1.18
ACTN1-206ENST00000544964 MRPL55Q7Z7F7 128 aaKnown RBP7.68□□□□□ -1.18
ACTN1-206ENST00000544964 MIEN1Q9BRT3 115 aa7.68□□□□□ -1.18
ACTN1-206ENST00000544964 LOC107984156A0A0G2JMH3 177 aa7.67□□□□□ -1.18
ACTN1-206ENST00000544964 NCR3O14931 201 aa7.67□□□□□ -1.18
ACTN1-206ENST00000544964 LBHQ53QV2 105 aaPredicted RBP7.67□□□□□ -1.18
ACTN1-206ENST00000544964 ARL17AQ8IVW1 177 aa7.67□□□□□ -1.18
ACTN1-206ENST00000544964 LINC00308Q8TCZ7 52 aa7.67□□□□□ -1.18
ACTN1-206ENST00000544964 LINC00167Q96N53 147 aa7.67□□□□□ -1.18
ACTN1-206ENST00000544964 RPL37AP8A6NKH3 93 aa7.66□□□□□ -1.18
ACTN1-206ENST00000544964 SPANXDQ9BXN6 97 aa7.66□□□□□ -1.18
ACTN1-206ENST00000544964 SPANXCQ9NY87 97 aa7.66□□□□□ -1.18
ACTN1-206ENST00000544964 DLEU1O43261 78 aa7.65□□□□□ -1.18
ACTN1-206ENST00000544964 PSORS1C2Q9UIG4 136 aa7.65□□□□□ -1.18
ACTN1-206ENST00000544964 IGKV2-28A0A075B6P5 120 aa7.64□□□□□ -1.19
ACTN1-206ENST00000544964 IGKV2D-28P01615 120 aa7.64□□□□□ -1.19
ACTN1-206ENST00000544964 SLC25A34Q6PIV7 304 aa7.64□□□□□ -1.19
ACTN1-206ENST00000544964 M0R378 163 aa7.63□□□□□ -1.19
ACTN1-206ENST00000544964 KRTAP10-8P60410 259 aa7.63□□□□□ -1.19
ACTN1-206ENST00000544964 SRSF9Q13242 221 aaKnown RBP eCLIP7.63□□□□□ -1.19
ACTN1-206ENST00000544964 SPINK6Q6UWN8 80 aa7.63□□□□□ -1.19
ACTN1-206ENST00000544964 MUSTN1Q8IVN3 82 aa7.63□□□□□ -1.19
ACTN1-206ENST00000544964 SPANXB1Q9NS25 103 aaPredicted RBP7.63□□□□□ -1.19
ACTN1-206ENST00000544964 NDUFC2O95298 119 aa7.62□□□□□ -1.19
ACTN1-206ENST00000544964 C1orf137Q5JT78 98 aa7.62□□□□□ -1.19
ACTN1-206ENST00000544964 Q6ZVH6 145 aa7.62□□□□□ -1.19
ACTN1-206ENST00000544964 IGLV1-50A0A075B6I6 118 aa7.61□□□□□ -1.19
ACTN1-206ENST00000544964 SMIM6P0DI80 62 aa7.61□□□□□ -1.19
ACTN1-206ENST00000544964 IFITM1P13164 125 aa7.61□□□□□ -1.19
ACTN1-206ENST00000544964 C2orf91Q6ZV80 131 aa7.61□□□□□ -1.19
ACTN1-206ENST00000544964 REG3GQ6UW15 175 aa7.6□□□□□ -1.19
ACTN1-206ENST00000544964 HIST1H4GQ99525 98 aa7.6□□□□□ -1.19
ACTN1-206ENST00000544964 TRBV10-3A0A0K0K1G6 114 aa7.59□□□□□ -1.19
ACTN1-206ENST00000544964 TRBV10-2A0A0K0K1G8 114 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms