RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	IGKV1D-42	A0A075B6H8	117 aa		0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	TRBV6-8	A0A0A6YYG3	113 aa		0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	TRAV12-3	A0A0B4J271	114 aa		0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	hDV103S1	A0JD37	113 aa		0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	HCG22	E2RYF7	251 aa		0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	BUB1B-PAK6	H3BSN5	160 aa		0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	IGKV1-5	P01602	117 aa		0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	ELOF1	P60002	83 aa	Known RBP	0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	HAMP	P81172	84 aa		0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	C9orf116	Q5BN46	136 aa	Predicted RBP	0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	LYPD5	Q6UWN5	251 aa		0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	ENHO	Q6UWT2	76 aa		0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	SOSTDC1	Q6X4U4	206 aa		0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	CASC2	Q6XLA1	102 aa		0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	TMEM254	Q8TBM7	123 aa		0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	SMIM2	Q9BVW6	85 aa		0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	CDC42SE1	Q9NRR8	79 aa		0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	TMEM14B	Q9NUH8	114 aa		0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	LINC00474	Q9P2X8	69 aa		0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	NDUFA12	Q9UI09	145 aa		0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	MUC4	Q99102	2169 aa		0.93	□□□□□ -2.26
LEMD3-205	ENST00000544506	DNAJC13	O75165	2243 aa		0.92	□□□□□ -2.26
LEMD3-205	ENST00000544506	UNC13C	Q8NB66	2214 aa		0.92	□□□□□ -2.26
LEMD3-205	ENST00000544506	TRAV22	A0A0B4J277	110 aa		0.92	□□□□□ -2.26
LEMD3-205	ENST00000544506	IGLV3-1	P01715	115 aa		0.92	□□□□□ -2.26
LEMD3-205	ENST00000544506	PRB4	P10163	310 aa	Predicted RBP	0.92	□□□□□ -2.26
LEMD3-205	ENST00000544506	COX6B1	P14854	86 aa		0.92	□□□□□ -2.26
LEMD3-205	ENST00000544506	RNASE4	P34096	147 aa	Known RBP	0.92	□□□□□ -2.26
LEMD3-205	ENST00000544506	PRCD	Q00LT1	54 aa		0.92	□□□□□ -2.26
LEMD3-205	ENST00000544506	NREP	Q16612	68 aa		0.92	□□□□□ -2.26
LEMD3-205	ENST00000544506	PIGY	Q3MUY2	71 aa		0.92	□□□□□ -2.26
LEMD3-205	ENST00000544506		Q86TA4	180 aa		0.92	□□□□□ -2.26
LEMD3-205	ENST00000544506	WFDC9	Q8NEX5	89 aa		0.92	□□□□□ -2.26
LEMD3-205	ENST00000544506	PRR15L	Q9BU68	103 aa		0.92	□□□□□ -2.26
LEMD3-205	ENST00000544506	CNFN	Q9BYD5	112 aa		0.92	□□□□□ -2.26
LEMD3-205	ENST00000544506	C14orf132	Q9NPU4	83 aa		0.92	□□□□□ -2.26
LEMD3-205	ENST00000544506	LINC00846	Q9NV44	126 aa		0.92	□□□□□ -2.26
LEMD3-205	ENST00000544506	USF3	Q68DE3	2245 aa		0.91	□□□□□ -2.26
LEMD3-205	ENST00000544506		A0A087WVE0	104 aa		0.91	□□□□□ -2.26
LEMD3-205	ENST00000544506	LOC101927531	A0A1B0GV80	90 aa		0.91	□□□□□ -2.26
LEMD3-205	ENST00000544506	C5orf67	F2Z3F1	127 aa		0.91	□□□□□ -2.26
LEMD3-205	ENST00000544506		Q6ZQT0	140 aa		0.91	□□□□□ -2.26
LEMD3-205	ENST00000544506	ZNF833P	Q6ZTB9	187 aa		0.91	□□□□□ -2.26
LEMD3-205	ENST00000544506	CCL4L1	Q8NHW4	92 aa		0.91	□□□□□ -2.26
LEMD3-205	ENST00000544506	OBSCN-AS1	Q96MR7	158 aa		0.91	□□□□□ -2.26
LEMD3-205	ENST00000544506	AMELX	Q99217	191 aa		0.91	□□□□□ -2.26
LEMD3-205	ENST00000544506	BPESC1	Q9GZL8	116 aa		0.91	□□□□□ -2.26
LEMD3-205	ENST00000544506	PROK2	Q9HC23	129 aa		0.91	□□□□□ -2.26
LEMD3-205	ENST00000544506	LENEP	Q9Y5L5	61 aa		0.91	□□□□□ -2.26
LEMD3-205	ENST00000544506	TNRC6B	Q9UPQ9	1833 aa	Known RBP	0.91	□□□□□ -2.26
LEMD3-205	ENST00000544506	LOC110117498	A0A087WWA1	95 aa		0.9	□□□□□ -2.27
LEMD3-205	ENST00000544506	TRBV7-4	A0A0J9YYF1	115 aa		0.9	□□□□□ -2.27
LEMD3-205	ENST00000544506	IGIP	A6NJ69	53 aa		0.9	□□□□□ -2.27
LEMD3-205	ENST00000544506		A6NN06	94 aa		0.9	□□□□□ -2.27
LEMD3-205	ENST00000544506		E7EUB6	86 aa		0.9	□□□□□ -2.27
LEMD3-205	ENST00000544506	NDUFA1	O15239	70 aa		0.9	□□□□□ -2.27
LEMD3-205	ENST00000544506	MRPL33	O75394	65 aa	Known RBP	0.9	□□□□□ -2.27
LEMD3-205	ENST00000544506	SPAG11B	Q08648	103 aa		0.9	□□□□□ -2.27
LEMD3-205	ENST00000544506	DEFB114	Q30KQ6	69 aa		0.9	□□□□□ -2.27
LEMD3-205	ENST00000544506	SPINK9	Q5DT21	86 aa		0.9	□□□□□ -2.27
LEMD3-205	ENST00000544506	SPAG11A	Q6PDA7	123 aa		0.9	□□□□□ -2.27
LEMD3-205	ENST00000544506	PATE2	Q6UY27	113 aa		0.9	□□□□□ -2.27
LEMD3-205	ENST00000544506	LINC00322	Q6ZN03	302 aa	Predicted RBP	0.9	□□□□□ -2.27
LEMD3-205	ENST00000544506	LINC00208	Q96KT6	92 aa		0.9	□□□□□ -2.27
LEMD3-205	ENST00000544506	WFDC10A	Q9H1F0	79 aa		0.9	□□□□□ -2.27
LEMD3-205	ENST00000544506	KNTC1	P50748	2209 aa		0.9	□□□□□ -2.27
LEMD3-205	ENST00000544506	CNTRL	Q7Z7A1	2325 aa		0.9	□□□□□ -2.27
LEMD3-205	ENST00000544506	TRBV10-1	A0A0K0K1A3	114 aa		0.89	□□□□□ -2.27
LEMD3-205	ENST00000544506	ETDC	A0A1B0GVM5	59 aa		0.89	□□□□□ -2.27
LEMD3-205	ENST00000544506		H0YGG7	62 aa		0.89	□□□□□ -2.27
LEMD3-205	ENST00000544506	MGP	P08493	103 aa		0.89	□□□□□ -2.27
LEMD3-205	ENST00000544506	LINC00158	P58513	81 aa		0.89	□□□□□ -2.27
LEMD3-205	ENST00000544506		Q5VV11	94 aa		0.89	□□□□□ -2.27
LEMD3-205	ENST00000544506	TMEM167A	Q8TBQ9	72 aa		0.89	□□□□□ -2.27
LEMD3-205	ENST00000544506	LINC00308	Q8TCZ7	52 aa		0.89	□□□□□ -2.27
LEMD3-205	ENST00000544506	GAFA1	Q96PS6	74 aa		0.89	□□□□□ -2.27
LEMD3-205	ENST00000544506	CDC42SE2	Q9NRR3	84 aa		0.89	□□□□□ -2.27
LEMD3-205	ENST00000544506	NDUFA4L2	Q9NRX3	87 aa		0.89	□□□□□ -2.27
LEMD3-205	ENST00000544506	CAD	P27708	2225 aa		0.89	□□□□□ -2.27
LEMD3-205	ENST00000544506	URB1	O60287	2271 aa	Known RBP	0.89	□□□□□ -2.27
LEMD3-205	ENST00000544506	ASCC3	Q8N3C0	2202 aa	Known RBP	0.88	□□□□□ -2.27
LEMD3-205	ENST00000544506	TRAV10	A0A0B4J240	114 aa		0.88	□□□□□ -2.27
LEMD3-205	ENST00000544506	DEFB108A	A8MXU0	73 aa		0.88	□□□□□ -2.27
LEMD3-205	ENST00000544506	NDUFA4	O00483	81 aa		0.88	□□□□□ -2.27
LEMD3-205	ENST00000544506	NCR3	O14931	201 aa		0.88	□□□□□ -2.27
LEMD3-205	ENST00000544506	UQCR11	O14957	56 aa		0.88	□□□□□ -2.27
LEMD3-205	ENST00000544506	CRIP1	P50238	77 aa		0.88	□□□□□ -2.27
LEMD3-205	ENST00000544506	POLR2K	P53803	58 aa	Known RBP	0.88	□□□□□ -2.27
LEMD3-205	ENST00000544506	DEFB112	Q30KQ8	113 aa		0.88	□□□□□ -2.27
LEMD3-205	ENST00000544506	C1orf134	Q5TEV5	83 aa		0.88	□□□□□ -2.27
LEMD3-205	ENST00000544506		Q8N814	137 aa		0.88	□□□□□ -2.27
LEMD3-205	ENST00000544506	COX7B2	Q8TF08	81 aa		0.88	□□□□□ -2.27
LEMD3-205	ENST00000544506	COX14	Q96I36	57 aa		0.88	□□□□□ -2.27
LEMD3-205	ENST00000544506	KLK9	Q9UKQ9	250 aa		0.88	□□□□□ -2.27
LEMD3-205	ENST00000544506	LINC01558	Q9Y6Z2	57 aa		0.88	□□□□□ -2.27
LEMD3-205	ENST00000544506	KNL1	Q8NG31	2342 aa		0.88	□□□□□ -2.27
LEMD3-205	ENST00000544506	TRBV6-4	A0A1B0GX49	114 aa		0.87	□□□□□ -2.27
LEMD3-205	ENST00000544506		H0Y9P7	68 aa		0.87	□□□□□ -2.27
LEMD3-205	ENST00000544506	STATH	P02808	62 aa		0.87	□□□□□ -2.27
LEMD3-205	ENST00000544506	COX7B	P24311	80 aa		0.87	□□□□□ -2.27

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