RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 LUZP6Q538Z0 58 aa4.86□□□□□ -1.63
SRGAP1-206ENST00000543397 C1orf137Q5JT78 98 aa4.85□□□□□ -1.63
SRGAP1-206ENST00000543397 ESRGQ1W209 222 aa4.85□□□□□ -1.63
SRGAP1-206ENST00000543397 SMIM11BQ8TCY0 68 aa4.85□□□□□ -1.63
SRGAP1-206ENST00000543397 IGHV6-1A0A0B4J1U7 121 aa4.85□□□□□ -1.63
SRGAP1-206ENST00000543397 DNAH12Q6ZR08 3092 aa4.85□□□□□ -1.63
SRGAP1-206ENST00000543397 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.85□□□□□ -1.63
SRGAP1-206ENST00000543397 WWC2-AS2Q96NR7 200 aa4.84□□□□□ -1.63
SRGAP1-206ENST00000543397 hDV103S1A0JD37 113 aa4.84□□□□□ -1.63
SRGAP1-206ENST00000543397 C10orf25Q5T742 122 aa4.84□□□□□ -1.63
SRGAP1-206ENST00000543397 C11orf72Q8NBR9 251 aa4.84□□□□□ -1.63
SRGAP1-206ENST00000543397 CEP350Q5VT06 3117 aa4.84□□□□□ -1.63
SRGAP1-206ENST00000543397 TRBV10-3A0A0K0K1G6 114 aa4.84□□□□□ -1.63
SRGAP1-206ENST00000543397 TEX49A0A1B0GTD5 131 aa4.83□□□□□ -1.64
SRGAP1-206ENST00000543397 CIRBP-AS1Q8TBR5 109 aa4.83□□□□□ -1.64
SRGAP1-206ENST00000543397 FAM19A4Q96LR4 140 aa4.83□□□□□ -1.64
SRGAP1-206ENST00000543397 CFAP46Q8IYW2 2715 aa4.83□□□□□ -1.64
SRGAP1-206ENST00000543397 AMELXQ99217 191 aa4.83□□□□□ -1.64
SRGAP1-206ENST00000543397 FLNAP21333 2647 aaKnown RBP4.82□□□□□ -1.64
SRGAP1-206ENST00000543397 Q75L30 129 aa4.82□□□□□ -1.64
SRGAP1-206ENST00000543397 PRR15LQ9BU68 103 aa4.82□□□□□ -1.64
SRGAP1-206ENST00000543397 IGLV5-37A0A075B6J1 123 aa4.82□□□□□ -1.64
SRGAP1-206ENST00000543397 ATP5EP2Q5VTU8 51 aa4.82□□□□□ -1.64
SRGAP1-206ENST00000543397 H3BNG1 76 aa4.81□□□□□ -1.64
SRGAP1-206ENST00000543397 CENPEQ02224 2701 aa4.81□□□□□ -1.64
SRGAP1-206ENST00000543397 PCSK5Q92824 1860 aa4.81□□□□□ -1.64
SRGAP1-206ENST00000543397 IGHV3OR16-9A0A0B4J2B5 98 aa4.81□□□□□ -1.64
SRGAP1-206ENST00000543397 COL27A1Q8IZC6 1860 aaPredicted RBP4.8□□□□□ -1.64
SRGAP1-206ENST00000543397 ITPR3Q14573 2671 aa4.8□□□□□ -1.64
SRGAP1-206ENST00000543397 CHTF8P0CG12 524 aa4.8□□□□□ -1.64
SRGAP1-206ENST00000543397 WFDC13Q8IUB5 93 aa4.8□□□□□ -1.64
SRGAP1-206ENST00000543397 SETXQ7Z333 2677 aaKnown RBP4.8□□□□□ -1.64
SRGAP1-206ENST00000543397 PRR3P79522 188 aaKnown RBP4.8□□□□□ -1.64
SRGAP1-206ENST00000543397 ENHOQ6UWT2 76 aa4.79□□□□□ -1.64
SRGAP1-206ENST00000543397 SDIM1Q6ZPB5 146 aa4.79□□□□□ -1.64
SRGAP1-206ENST00000543397 TM2D3Q9BRN9 247 aa4.79□□□□□ -1.64
SRGAP1-206ENST00000543397 KIF25-AS1Q9Y6Z4 181 aa4.79□□□□□ -1.64
SRGAP1-206ENST00000543397 SPATA3Q8NHX4 192 aa4.79□□□□□ -1.64
SRGAP1-206ENST00000543397 LINC00315P59091 139 aa4.79□□□□□ -1.64
SRGAP1-206ENST00000543397 Q8NAQ8 132 aa4.79□□□□□ -1.64
SRGAP1-206ENST00000543397 NBDYA0A0U1RRE5 68 aa4.78□□□□□ -1.64
SRGAP1-206ENST00000543397 URB1-AS1Q96HZ7 61 aa4.78□□□□□ -1.64
SRGAP1-206ENST00000543397 Q6JHZ5 121 aa4.78□□□□□ -1.64
SRGAP1-206ENST00000543397 IGLV7-46A0A075B6I9 117 aa4.78□□□□□ -1.64
SRGAP1-206ENST00000543397 C2orf91Q6ZV80 131 aa4.78□□□□□ -1.64
SRGAP1-206ENST00000543397 HCG22E2RYF7 251 aa4.78□□□□□ -1.64
SRGAP1-206ENST00000543397 NTM-AS1Q6ZSK4 140 aa4.78□□□□□ -1.64
SRGAP1-206ENST00000543397 SNURFQ9Y675 71 aa4.78□□□□□ -1.64
SRGAP1-206ENST00000543397 A0A096LNT2 108 aa4.77□□□□□ -1.65
SRGAP1-206ENST00000543397 C16orf90A8MZG2 172 aa4.77□□□□□ -1.65
SRGAP1-206ENST00000543397 LINC00313P59037 77 aa4.77□□□□□ -1.65
SRGAP1-206ENST00000543397 ATP11AUNQ6ZP68 121 aa4.77□□□□□ -1.65
SRGAP1-206ENST00000543397 Q9BRP9 147 aa4.77□□□□□ -1.65
SRGAP1-206ENST00000543397 BPTFQ12830 3046 aa4.77□□□□□ -1.65
SRGAP1-206ENST00000543397 TSPEAR-AS2P59090 65 aa4.77□□□□□ -1.65
SRGAP1-206ENST00000543397 SPINT4Q6UDR6 99 aa4.77□□□□□ -1.65
SRGAP1-206ENST00000543397 PRLHP81277 87 aa4.77□□□□□ -1.65
SRGAP1-206ENST00000543397 Q8N814 137 aa4.76□□□□□ -1.65
SRGAP1-206ENST00000543397 C22orf24Q9Y442 160 aa4.76□□□□□ -1.65
SRGAP1-206ENST00000543397 SPAG11AQ6PDA7 123 aa4.76□□□□□ -1.65
SRGAP1-206ENST00000543397 K7EIL1 84 aa4.75□□□□□ -1.65
SRGAP1-206ENST00000543397 LINC00310P59036 64 aa4.75□□□□□ -1.65
SRGAP1-206ENST00000543397 ADAMTSL4-AS1Q5T5F5 129 aa4.75□□□□□ -1.65
SRGAP1-206ENST00000543397 LINC00588Q9Y4M8 146 aa4.75□□□□□ -1.65
SRGAP1-206ENST00000543397 A0A096LNJ9 63 aa4.75□□□□□ -1.65
SRGAP1-206ENST00000543397 TEP1Q99973 2627 aaKnown RBP4.75□□□□□ -1.65
SRGAP1-206ENST00000543397 LIMD2Q9BT23 127 aa4.75□□□□□ -1.65
SRGAP1-206ENST00000543397 OXTP01178 125 aa4.74□□□□□ -1.65
SRGAP1-206ENST00000543397 RTL8CO15255 209 aa4.74□□□□□ -1.65
SRGAP1-206ENST00000543397 RANBP2P49792 3224 aaKnown RBP4.74□□□□□ -1.65
SRGAP1-206ENST00000543397 CHD7Q9P2D1 2997 aa4.74□□□□□ -1.65
SRGAP1-206ENST00000543397 KLK9Q2XQG4 91 aa4.73□□□□□ -1.65
SRGAP1-206ENST00000543397 Q8N9L7 120 aa4.73□□□□□ -1.65
SRGAP1-206ENST00000543397 A0A087WSZ3 146 aa4.73□□□□□ -1.65
SRGAP1-206ENST00000543397 DNAH14Q0VDD8 3507 aa4.73□□□□□ -1.65
SRGAP1-206ENST00000543397 SMCR5Q8TEV8 140 aa4.73□□□□□ -1.65
SRGAP1-206ENST00000543397 OCR1Q9BZK8 76 aa4.73□□□□□ -1.65
SRGAP1-206ENST00000543397 LINC00337Q8N6G1 96 aa4.72□□□□□ -1.65
SRGAP1-206ENST00000543397 A0A087WYN8 130 aa4.72□□□□□ -1.65
SRGAP1-206ENST00000543397 PLA2G1BP04054 148 aaKnown RBP4.72□□□□□ -1.65
SRGAP1-206ENST00000543397 KRTAP10-11P60412 298 aa4.72□□□□□ -1.65
SRGAP1-206ENST00000543397 A8MTW9 85 aa4.71□□□□□ -1.66
SRGAP1-206ENST00000543397 LINC00167Q96N53 147 aa4.71□□□□□ -1.66
SRGAP1-206ENST00000543397 C6orf48Q9UBA6 75 aa4.71□□□□□ -1.66
SRGAP1-206ENST00000543397 Q5XG85 94 aa4.71□□□□□ -1.66
SRGAP1-206ENST00000543397 KRTAP1-3Q8IUG1 177 aa4.71□□□□□ -1.66
SRGAP1-206ENST00000543397 STAB1Q9NY15 2570 aa4.71□□□□□ -1.66
SRGAP1-206ENST00000543397 ERC2-IT1O76042 136 aa4.7□□□□□ -1.66
SRGAP1-206ENST00000543397 LINC00575Q6W349 94 aa4.7□□□□□ -1.66
SRGAP1-206ENST00000543397 Q6ZRP5 223 aa4.7□□□□□ -1.66
SRGAP1-206ENST00000543397 Q8N3U1 123 aa4.7□□□□□ -1.66
SRGAP1-206ENST00000543397 DNAH10OSP0CZ25 163 aa4.7□□□□□ -1.66
SRGAP1-206ENST00000543397 CAMK2N1Q7Z7J9 78 aa4.7□□□□□ -1.66
SRGAP1-206ENST00000543397 C19orf73Q9NVV2 129 aa4.7□□□□□ -1.66
SRGAP1-206ENST00000543397 TRAV7A0A075B6U4 112 aa4.69□□□□□ -1.66
SRGAP1-206ENST00000543397 TRBV7-7A0A0K0K1E9 115 aa4.69□□□□□ -1.66
SRGAP1-206ENST00000543397 ZNF292O60281 2723 aa4.69□□□□□ -1.66
SRGAP1-206ENST00000543397 KRTAP10-3P60369 221 aa4.69□□□□□ -1.66
SRGAP1-206ENST00000543397 KRTAP1-1Q07627 177 aa4.68□□□□□ -1.66
SRGAP1-206ENST00000543397 SPACA4Q8TDM5 124 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms