RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 C9orf116Q5BN46 136 aaPredicted RBP4.81□□□□□ -1.64
MRPS35-204ENST00000542199 ORMDL3Q8N138 153 aa4.81□□□□□ -1.64
MRPS35-204ENST00000542199 MRPL35Q9NZE8 188 aaKnown RBP4.81□□□□□ -1.64
MRPS35-204ENST00000542199 RPL18AQ02543 176 aaKnown RBP4.8□□□□□ -1.64
MRPS35-204ENST00000542199 TMEM136Q6ZRR5 245 aa4.8□□□□□ -1.64
MRPS35-204ENST00000542199 ORAOV1Q8WV07 137 aa4.8□□□□□ -1.64
MRPS35-204ENST00000542199 NDUFA1O15239 70 aa4.79□□□□□ -1.64
MRPS35-204ENST00000542199 TLX1NBP0CAT3 122 aa4.79□□□□□ -1.64
MRPS35-204ENST00000542199 PRELID3AQ96N28 172 aa4.79□□□□□ -1.64
MRPS35-204ENST00000542199 IMMP2LQ96T52 175 aa4.79□□□□□ -1.64
MRPS35-204ENST00000542199 PSORS1C2Q9UIG4 136 aa4.79□□□□□ -1.64
MRPS35-204ENST00000542199 LAMTOR2Q9Y2Q5 125 aa4.79□□□□□ -1.64
MRPS35-204ENST00000542199 TGIF2-C20orf24A0A0A6YYL0 155 aa4.78□□□□□ -1.64
MRPS35-204ENST00000542199 RAB5AP20339 215 aa4.78□□□□□ -1.64
MRPS35-204ENST00000542199 IFI27P40305 119 aaPredicted RBP4.78□□□□□ -1.64
MRPS35-204ENST00000542199 UNQ6190/PRO20217Q6UXQ8 127 aa4.78□□□□□ -1.64
MRPS35-204ENST00000542199 PHF5AQ7RTV0 110 aaKnown RBP4.78□□□□□ -1.64
MRPS35-204ENST00000542199 Q8N9L7 120 aa4.78□□□□□ -1.64
MRPS35-204ENST00000542199 C6orf48Q9UBA6 75 aa4.78□□□□□ -1.64
MRPS35-204ENST00000542199 TSPAN13O95857 204 aa4.77□□□□□ -1.65
MRPS35-204ENST00000542199 MT-ND6P03923 174 aa4.77□□□□□ -1.65
MRPS35-204ENST00000542199 LINC00173Q6ZV60 143 aa4.77□□□□□ -1.65
MRPS35-204ENST00000542199 TMEM141Q96I45 108 aa4.77□□□□□ -1.65
MRPS35-204ENST00000542199 TRBV30A0A0K0K1B3 111 aa4.76□□□□□ -1.65
MRPS35-204ENST00000542199 MT-ND4LP03901 98 aa4.76□□□□□ -1.65
MRPS35-204ENST00000542199 UBE2D1P51668 147 aa4.76□□□□□ -1.65
MRPS35-204ENST00000542199 C1orf137Q5JT78 98 aa4.76□□□□□ -1.65
MRPS35-204ENST00000542199 Q8N8P6 123 aa4.76□□□□□ -1.65
MRPS35-204ENST00000542199 AMELXQ99217 191 aa4.76□□□□□ -1.65
MRPS35-204ENST00000542199 MAP1LC3AQ9H492 121 aa4.76□□□□□ -1.65
MRPS35-204ENST00000542199 LOC389332A0A1B0GUA5 103 aa4.75□□□□□ -1.65
MRPS35-204ENST00000542199 IGIPA6NJ69 53 aa4.75□□□□□ -1.65
MRPS35-204ENST00000542199 K7EMI3 77 aa4.75□□□□□ -1.65
MRPS35-204ENST00000542199 IGLV7-43P04211 117 aa4.75□□□□□ -1.65
MRPS35-204ENST00000542199 TEX43Q6ZNM6 134 aa4.75□□□□□ -1.65
MRPS35-204ENST00000542199 FAM19A3Q7Z5A8 133 aa4.75□□□□□ -1.65
MRPS35-204ENST00000542199 CYSLTR1Q9Y271 337 aa4.75□□□□□ -1.65
MRPS35-204ENST00000542199 NDUFC2-KCTD14E9PQ53 114 aa4.74□□□□□ -1.65
MRPS35-204ENST00000542199 CXCL5P42830 114 aa4.74□□□□□ -1.65
MRPS35-204ENST00000542199 ORMDL2Q53FV1 153 aa4.74□□□□□ -1.65
MRPS35-204ENST00000542199 C2orf82Q6UX34 121 aa4.74□□□□□ -1.65
MRPS35-204ENST00000542199 FAM19A5Q7Z5A7 132 aaPredicted RBP4.74□□□□□ -1.65
MRPS35-204ENST00000542199 C2orf88Q9BSF0 95 aa4.74□□□□□ -1.65
MRPS35-204ENST00000542199 RAB14P61106 215 aa4.73□□□□□ -1.65
MRPS35-204ENST00000542199 DIRC1Q969H9 104 aa4.73□□□□□ -1.65
MRPS35-204ENST00000542199 NXT2Q9NPJ8 142 aaKnown RBP4.73□□□□□ -1.65
MRPS35-204ENST00000542199 M0QXV9 152 aa4.72□□□□□ -1.65
MRPS35-204ENST00000542199 Q8IZM0 81 aa4.72□□□□□ -1.65
MRPS35-204ENST00000542199 PACRGQ96M98 296 aaPredicted RBP4.72□□□□□ -1.65
MRPS35-204ENST00000542199 TIMM17AQ99595 171 aa4.72□□□□□ -1.65
MRPS35-204ENST00000542199 ADCYAP1P18509 176 aa4.71□□□□□ -1.66
MRPS35-204ENST00000542199 HERVK_113P63121 156 aa4.71□□□□□ -1.66
MRPS35-204ENST00000542199 SEC11AP67812 179 aa4.71□□□□□ -1.66
MRPS35-204ENST00000542199 CLLU1Q5K131 121 aa4.71□□□□□ -1.66
MRPS35-204ENST00000542199 TOMM6Q96B49 74 aa4.71□□□□□ -1.66
MRPS35-204ENST00000542199 CDKN2A-AS1Q9UH64 79 aa4.71□□□□□ -1.66
MRPS35-204ENST00000542199 PRO0461Q9UI25 63 aa4.71□□□□□ -1.66
MRPS35-204ENST00000542199 IGLV1-50A0A075B6I6 118 aa4.7□□□□□ -1.66
MRPS35-204ENST00000542199 G0S2P27469 103 aa4.7□□□□□ -1.66
MRPS35-204ENST00000542199 UBE2AP49459 152 aa4.7□□□□□ -1.66
MRPS35-204ENST00000542199 CKS1BP61024 79 aa4.7□□□□□ -1.66
MRPS35-204ENST00000542199 UBE2BP63146 152 aa4.7□□□□□ -1.66
MRPS35-204ENST00000542199 TOMM7Q9P0U1 55 aa4.7□□□□□ -1.66
MRPS35-204ENST00000542199 TRAV9-1A0A075B6T8 112 aa4.69□□□□□ -1.66
MRPS35-204ENST00000542199 LINC01546A6NGU7 62 aa4.69□□□□□ -1.66
MRPS35-204ENST00000542199 F8VRH5 84 aa4.69□□□□□ -1.66
MRPS35-204ENST00000542199 GEMIN7Q9H840 131 aaKnown RBP4.69□□□□□ -1.66
MRPS35-204ENST00000542199 A0A096LNJ9 63 aa4.68□□□□□ -1.66
MRPS35-204ENST00000542199 TMEM218A2RU14 115 aa4.68□□□□□ -1.66
MRPS35-204ENST00000542199 HERVK_113P61574 105 aa4.68□□□□□ -1.66
MRPS35-204ENST00000542199 LINC00469Q8N7U9 141 aa4.68□□□□□ -1.66
MRPS35-204ENST00000542199 XAGE1AQ9HD64 81 aa4.68□□□□□ -1.66
MRPS35-204ENST00000542199 TP73-AS1Q9UF72 201 aa4.68□□□□□ -1.66
MRPS35-204ENST00000542199 C22orf24Q9Y442 160 aa4.68□□□□□ -1.66
MRPS35-204ENST00000542199 TINCRA0A1B0GVN0 87 aa4.67□□□□□ -1.66
MRPS35-204ENST00000542199 LINC01549A6NIU2 74 aa4.67□□□□□ -1.66
MRPS35-204ENST00000542199 NUPR1O60356 82 aa4.67□□□□□ -1.66
MRPS35-204ENST00000542199 PCP2Q8IVA1 136 aa4.67□□□□□ -1.66
MRPS35-204ENST00000542199 SCGB3A1Q96QR1 104 aa4.67□□□□□ -1.66
MRPS35-204ENST00000542199 GNB1LQ9BYB4 327 aa4.67□□□□□ -1.66
MRPS35-204ENST00000542199 FAT4Q6V0I7 4981 aa4.66□□□□□ -1.66
MRPS35-204ENST00000542199 IFITM2Q01629 132 aa4.66□□□□□ -1.66
MRPS35-204ENST00000542199 PDZD11Q5EBL8 140 aa4.66□□□□□ -1.66
MRPS35-204ENST00000542199 MRPL55Q7Z7F7 128 aaKnown RBP4.66□□□□□ -1.66
MRPS35-204ENST00000542199 SEC11CQ9BY50 192 aa4.66□□□□□ -1.66
MRPS35-204ENST00000542199 CST9LQ9H4G1 147 aa4.66□□□□□ -1.66
MRPS35-204ENST00000542199 CARHSP1Q9Y2V2 147 aaKnown RBP4.66□□□□□ -1.66
MRPS35-204ENST00000542199 MUC17Q685J3 4493 aa4.66□□□□□ -1.66
MRPS35-204ENST00000542199 COX7B2Q8TF08 81 aa4.65□□□□□ -1.67
MRPS35-204ENST00000542199 BCE1O60756 84 aa4.64□□□□□ -1.67
MRPS35-204ENST00000542199 S100PP25815 95 aa4.64□□□□□ -1.67
MRPS35-204ENST00000542199 COX19Q49B96 90 aa4.64□□□□□ -1.67
MRPS35-204ENST00000542199 C10orf91Q5T1B1 145 aa4.64□□□□□ -1.67
MRPS35-204ENST00000542199 SPINK8P0C7L1 97 aa4.63□□□□□ -1.67
MRPS35-204ENST00000542199 RPL28P46779 137 aaKnown RBP4.63□□□□□ -1.67
MRPS35-204ENST00000542199 PMVKQ15126 192 aa4.63□□□□□ -1.67
MRPS35-204ENST00000542199 FA2HQ7L5A8 372 aa4.63□□□□□ -1.67
MRPS35-204ENST00000542199 H3BRM9 83 aa4.62□□□□□ -1.67
MRPS35-204ENST00000542199 IGLC3P0DOY3 106 aa4.62□□□□□ -1.67
MRPS35-204ENST00000542199 FABP9Q0Z7S8 132 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms