RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 C10orf25Q5T742 122 aa4.35□□□□□ -1.71
CLTCL1-206ENST00000540896 Q6ZRN7 208 aaPredicted RBP4.35□□□□□ -1.71
CLTCL1-206ENST00000540896 C2orf91Q6ZV80 131 aa4.35□□□□□ -1.71
CLTCL1-206ENST00000540896 CARD19Q96LW7 228 aa4.35□□□□□ -1.71
CLTCL1-206ENST00000540896 ERG28Q9UKR5 140 aa4.35□□□□□ -1.71
CLTCL1-206ENST00000540896 A0A087WTM6 91 aa4.34□□□□□ -1.71
CLTCL1-206ENST00000540896 LRCOL1A6NCL2 159 aa4.34□□□□□ -1.71
CLTCL1-206ENST00000540896 TIMM17BO60830 172 aa4.34□□□□□ -1.71
CLTCL1-206ENST00000540896 GCSHP23434 173 aa4.34□□□□□ -1.71
CLTCL1-206ENST00000540896 NPC2P61916 151 aa4.34□□□□□ -1.71
CLTCL1-206ENST00000540896 COX17Q14061 63 aa4.34□□□□□ -1.71
CLTCL1-206ENST00000540896 WFDC2Q14508 124 aa4.34□□□□□ -1.71
CLTCL1-206ENST00000540896 Q6ZRU5 148 aa4.34□□□□□ -1.71
CLTCL1-206ENST00000540896 DAND5Q8N907 189 aa4.34□□□□□ -1.71
CLTCL1-206ENST00000540896 COPS9Q8WXC6 57 aa4.34□□□□□ -1.71
CLTCL1-206ENST00000540896 C6orf48Q9UBA6 75 aa4.34□□□□□ -1.71
CLTCL1-206ENST00000540896 M0R143 59 aa4.33□□□□□ -1.72
CLTCL1-206ENST00000540896 RTL8CO15255 209 aa4.33□□□□□ -1.72
CLTCL1-206ENST00000540896 HINT1P49773 126 aaPredicted RBP4.33□□□□□ -1.72
CLTCL1-206ENST00000540896 HSD52Q0P140 79 aa4.33□□□□□ -1.72
CLTCL1-206ENST00000540896 BATFQ16520 125 aa4.33□□□□□ -1.72
CLTCL1-206ENST00000540896 ADAMTSL4-AS1Q5T5F5 129 aa4.33□□□□□ -1.72
CLTCL1-206ENST00000540896 Q6ZVH6 145 aa4.33□□□□□ -1.72
CLTCL1-206ENST00000540896 MIR7-3HGQ8N6C7 128 aa4.33□□□□□ -1.72
CLTCL1-206ENST00000540896 Q8N814 137 aa4.33□□□□□ -1.72
CLTCL1-206ENST00000540896 SPANXB1Q9NS25 103 aaPredicted RBP4.33□□□□□ -1.72
CLTCL1-206ENST00000540896 EPPK1P58107 5090 aaKnown RBP4.33□□□□□ -1.72
CLTCL1-206ENST00000540896 FRAS1Q86XX4 4008 aa4.32□□□□□ -1.72
CLTCL1-206ENST00000540896 NDUFC2-KCTD14E9PQ53 114 aa4.32□□□□□ -1.72
CLTCL1-206ENST00000540896 IFITM1P13164 125 aa4.32□□□□□ -1.72
CLTCL1-206ENST00000540896 RPL24P83731 157 aaKnown RBP4.32□□□□□ -1.72
CLTCL1-206ENST00000540896 RPL18AQ02543 176 aaKnown RBP4.32□□□□□ -1.72
CLTCL1-206ENST00000540896 TAL2Q16559 108 aa4.32□□□□□ -1.72
CLTCL1-206ENST00000540896 GAGE2EQ4V326 116 aa4.32□□□□□ -1.72
CLTCL1-206ENST00000540896 MUSTN1Q8IVN3 82 aa4.32□□□□□ -1.72
CLTCL1-206ENST00000540896 CEND1Q8N111 149 aa4.32□□□□□ -1.72
CLTCL1-206ENST00000540896 LITAFQ99732 161 aa4.32□□□□□ -1.72
CLTCL1-206ENST00000540896 SPANXDQ9BXN6 97 aa4.32□□□□□ -1.72
CLTCL1-206ENST00000540896 SPANXCQ9NY87 97 aa4.32□□□□□ -1.72
CLTCL1-206ENST00000540896 GAGE2DQ9UEU5 116 aa4.32□□□□□ -1.72
CLTCL1-206ENST00000540896 DNAH10Q8IVF4 4471 aa4.32□□□□□ -1.72
CLTCL1-206ENST00000540896 LOC107984640A0A0U1RRK4 108 aa4.31□□□□□ -1.72
CLTCL1-206ENST00000540896 CNBPP62633 177 aaKnown RBP4.31□□□□□ -1.72
CLTCL1-206ENST00000540896 GAGE2BQ13066 116 aa4.31□□□□□ -1.72
CLTCL1-206ENST00000540896 LINC00308Q8TCZ7 52 aa4.31□□□□□ -1.72
CLTCL1-206ENST00000540896 SND1-IT1Q9HBX3 110 aa4.31□□□□□ -1.72
CLTCL1-206ENST00000540896 BIRC6Q9NR09 4857 aa4.3□□□□□ -1.72
CLTCL1-206ENST00000540896 DNAH17Q9UFH2 4485 aa4.3□□□□□ -1.72
CLTCL1-206ENST00000540896 BVES-AS1Q5T3Y7 98 aa4.3□□□□□ -1.72
CLTCL1-206ENST00000540896 LINC00336Q6ZUF6 198 aa4.3□□□□□ -1.72
CLTCL1-206ENST00000540896 DPH3Q96FX2 82 aa4.3□□□□□ -1.72
CLTCL1-206ENST00000540896 XAGE1AQ9HD64 81 aa4.3□□□□□ -1.72
CLTCL1-206ENST00000540896 PKIGQ9Y2B9 76 aa4.3□□□□□ -1.72
CLTCL1-206ENST00000540896 FAT2Q9NYQ8 4349 aa4.29□□□□□ -1.72
CLTCL1-206ENST00000540896 IGLV5-52A0A0A0MRZ9 124 aa4.29□□□□□ -1.72
CLTCL1-206ENST00000540896 A4D1N5 150 aa4.29□□□□□ -1.72
CLTCL1-206ENST00000540896 A6NDN8 102 aa4.29□□□□□ -1.72
CLTCL1-206ENST00000540896 C9orf163Q8N9P6 203 aa4.29□□□□□ -1.72
CLTCL1-206ENST00000540896 NHP2Q9NX24 153 aaKnown RBP4.29□□□□□ -1.72
CLTCL1-206ENST00000540896 IGKV2-24A0A0C4DH68 120 aa4.28□□□□□ -1.72
CLTCL1-206ENST00000540896 TLX1NBP0CAT3 122 aa4.28□□□□□ -1.72
CLTCL1-206ENST00000540896 FUSP35637 526 aaKnown RBP eCLIP4.28□□□□□ -1.72
CLTCL1-206ENST00000540896 FXYD2P54710 66 aa4.28□□□□□ -1.72
CLTCL1-206ENST00000540896 LINC01620Q4KN68 170 aa4.28□□□□□ -1.72
CLTCL1-206ENST00000540896 SOSTDC1Q6X4U4 206 aa4.28□□□□□ -1.72
CLTCL1-206ENST00000540896 Q6ZRP5 223 aa4.28□□□□□ -1.72
CLTCL1-206ENST00000540896 RAB37Q96AX2 223 aa4.28□□□□□ -1.72
CLTCL1-206ENST00000540896 PKD1P98161 4303 aa4.28□□□□□ -1.72
CLTCL1-206ENST00000540896 C16orf90A8MZG2 172 aa4.27□□□□□ -1.73
CLTCL1-206ENST00000540896 OR13C6PQ8NH95 151 aa4.27□□□□□ -1.73
CLTCL1-206ENST00000540896 SNHG12Q9BXW3 62 aa4.27□□□□□ -1.73
CLTCL1-206ENST00000540896 HECTD4Q9Y4D8 3996 aa4.27□□□□□ -1.73
CLTCL1-206ENST00000540896 A0A096LNI7 61 aa4.26□□□□□ -1.73
CLTCL1-206ENST00000540896 LOC107984156A0A0G2JMH3 177 aa4.26□□□□□ -1.73
CLTCL1-206ENST00000540896 A0A1B0GVY2 172 aa4.26□□□□□ -1.73
CLTCL1-206ENST00000540896 K7ERJ3 54 aa4.26□□□□□ -1.73
CLTCL1-206ENST00000540896 PRR3P79522 188 aaKnown RBP4.26□□□□□ -1.73
CLTCL1-206ENST00000540896 C9orf129Q5T035 196 aaKnown RBP4.26□□□□□ -1.73
CLTCL1-206ENST00000540896 SDIM1Q6ZPB5 146 aa4.26□□□□□ -1.73
CLTCL1-206ENST00000540896 ARL17AQ8IVW1 177 aa4.26□□□□□ -1.73
CLTCL1-206ENST00000540896 PPDPFQ9H3Y8 114 aa4.26□□□□□ -1.73
CLTCL1-206ENST00000540896 LINC00474Q9P2X8 69 aa4.26□□□□□ -1.73
CLTCL1-206ENST00000540896 PRO1854Q9UHT4 67 aa4.26□□□□□ -1.73
CLTCL1-206ENST00000540896 TRAV13-2A0A0B4J235 113 aa4.25□□□□□ -1.73
CLTCL1-206ENST00000540896 H7C2G1 150 aa4.25□□□□□ -1.73
CLTCL1-206ENST00000540896 NCR3O14931 201 aa4.25□□□□□ -1.73
CLTCL1-206ENST00000540896 NDUFC2O95298 119 aa4.25□□□□□ -1.73
CLTCL1-206ENST00000540896 CFC1BP0CG36 223 aa4.25□□□□□ -1.73
CLTCL1-206ENST00000540896 CFC1P0CG37 223 aa4.25□□□□□ -1.73
CLTCL1-206ENST00000540896 Q1RN00 199 aa4.25□□□□□ -1.73
CLTCL1-206ENST00000540896 COL5A1-AS1Q5SY13 56 aa4.25□□□□□ -1.73
CLTCL1-206ENST00000540896 S100A7L2Q5SY68 101 aa4.25□□□□□ -1.73
CLTCL1-206ENST00000540896 FAM19A5Q7Z5A7 132 aaPredicted RBP4.25□□□□□ -1.73
CLTCL1-206ENST00000540896 NKAPP1Q8N9T2 125 aa4.25□□□□□ -1.73
CLTCL1-206ENST00000540896 A0A0B4J2C4 111 aa4.24□□□□□ -1.73
CLTCL1-206ENST00000540896 FAM168BA1KXE4 195 aa4.24□□□□□ -1.73
CLTCL1-206ENST00000540896 CHTF8P0CG12 524 aa4.24□□□□□ -1.73
CLTCL1-206ENST00000540896 RPL13AP40429 203 aaKnown RBP4.24□□□□□ -1.73
CLTCL1-206ENST00000540896 IGKV2-28A0A075B6P5 120 aa4.23□□□□□ -1.73
CLTCL1-206ENST00000540896 TRBV10-2A0A0K0K1G8 114 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms