RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 CRYGAP11844 174 aa3.74□□□□□ -1.81
PROM1-220ENST00000540805 LINC01561Q8N1V8 128 aa3.74□□□□□ -1.81
PROM1-220ENST00000540805 PSMB8P28062 276 aa3.74□□□□□ -1.81
PROM1-220ENST00000540805 SOSTDC1Q6X4U4 206 aa3.74□□□□□ -1.81
PROM1-220ENST00000540805 IGLV5-39A0A0G2JS06 123 aa3.73□□□□□ -1.81
PROM1-220ENST00000540805 LOC100131303A0A0U1RQF7 123 aa3.73□□□□□ -1.81
PROM1-220ENST00000540805 UPK3BQ9BT76 320 aa3.73□□□□□ -1.81
PROM1-220ENST00000540805 A0A0J9YWU9 116 aa3.73□□□□□ -1.81
PROM1-220ENST00000540805 KPRPQ5T749 579 aaPredicted RBP3.73□□□□□ -1.81
PROM1-220ENST00000540805 MIR7-3HGQ8N6C7 128 aa3.73□□□□□ -1.81
PROM1-220ENST00000540805 COX7B2Q8TF08 81 aa3.73□□□□□ -1.81
PROM1-220ENST00000540805 C14orf132Q9NPU4 83 aa3.73□□□□□ -1.81
PROM1-220ENST00000540805 COX6A2Q02221 97 aa3.73□□□□□ -1.81
PROM1-220ENST00000540805 REG3AQ06141 175 aa3.73□□□□□ -1.81
PROM1-220ENST00000540805 RBMY1FQ15415 496 aaKnown RBP3.73□□□□□ -1.81
PROM1-220ENST00000540805 TRAV23DV6A0A075B6W5 121 aa3.72□□□□□ -1.81
PROM1-220ENST00000540805 Q6ZSN1 163 aa3.72□□□□□ -1.81
PROM1-220ENST00000540805 OVOL2Q9BRP0 275 aa3.72□□□□□ -1.81
PROM1-220ENST00000540805 TRAV13-2A0A0B4J235 113 aa3.72□□□□□ -1.81
PROM1-220ENST00000540805 SMIM1B2RUZ4 78 aa3.72□□□□□ -1.81
PROM1-220ENST00000540805 NBEAL2Q6ZNJ1 2754 aa3.72□□□□□ -1.81
PROM1-220ENST00000540805 SEC61GP60059 68 aa3.72□□□□□ -1.81
PROM1-220ENST00000540805 PIK3CD-AS1Q5SR53 167 aa3.72□□□□□ -1.81
PROM1-220ENST00000540805 LINC00242Q5T6M2 205 aa3.72□□□□□ -1.81
PROM1-220ENST00000540805 LINC00846Q9NV44 126 aa3.72□□□□□ -1.81
PROM1-220ENST00000540805 SLPIP03973 132 aa3.71□□□□□ -1.82
PROM1-220ENST00000540805 C20orf197Q8N268 126 aa3.71□□□□□ -1.82
PROM1-220ENST00000540805 RPL28P46779 137 aaKnown RBP3.71□□□□□ -1.82
PROM1-220ENST00000540805 TMEM258P61165 79 aa3.71□□□□□ -1.82
PROM1-220ENST00000540805 Q6JHZ5 121 aa3.71□□□□□ -1.82
PROM1-220ENST00000540805 UBL5Q9BZL1 73 aa3.71□□□□□ -1.82
PROM1-220ENST00000540805 TRBV10-1A0A0K0K1A3 114 aa3.71□□□□□ -1.82
PROM1-220ENST00000540805 MIFP14174 115 aa3.71□□□□□ -1.82
PROM1-220ENST00000540805 BRK1Q8WUW1 75 aa3.71□□□□□ -1.82
PROM1-220ENST00000540805 CHCHD10Q8WYQ3 142 aaPredicted RBP3.71□□□□□ -1.82
PROM1-220ENST00000540805 TRRAPQ9Y4A5 3859 aa3.71□□□□□ -1.82
PROM1-220ENST00000540805 TRAV10A0A0B4J240 114 aa3.7□□□□□ -1.82
PROM1-220ENST00000540805 FAM19A3Q7Z5A8 133 aa3.7□□□□□ -1.82
PROM1-220ENST00000540805 FAM19A1Q7Z5A9 133 aa3.7□□□□□ -1.82
PROM1-220ENST00000540805 SNURFQ9Y675 71 aa3.7□□□□□ -1.82
PROM1-220ENST00000540805 VWFP04275 2813 aa3.7□□□□□ -1.82
PROM1-220ENST00000540805 USP17L23D6RBM5 183 aa3.7□□□□□ -1.82
PROM1-220ENST00000540805 ODF3L2Q3SX64 289 aa3.7□□□□□ -1.82
PROM1-220ENST00000540805 FP248Q71RG6 208 aaPredicted RBP3.7□□□□□ -1.82
PROM1-220ENST00000540805 SERP2Q8N6R1 65 aa3.7□□□□□ -1.82
PROM1-220ENST00000540805 LYRM9A8MSI8 78 aa3.7□□□□□ -1.82
PROM1-220ENST00000540805 DNAH3Q8TD57 4116 aa3.7□□□□□ -1.82
PROM1-220ENST00000540805 A0A087WYN8 130 aa3.69□□□□□ -1.82
PROM1-220ENST00000540805 IGKV2-28A0A075B6P5 120 aa3.69□□□□□ -1.82
PROM1-220ENST00000540805 H0YGX0 51 aa3.69□□□□□ -1.82
PROM1-220ENST00000540805 IGKV2D-28P01615 120 aa3.69□□□□□ -1.82
PROM1-220ENST00000540805 Q6ZTC4 211 aa3.69□□□□□ -1.82
PROM1-220ENST00000540805 LINC00337Q8N6G1 96 aa3.69□□□□□ -1.82
PROM1-220ENST00000540805 MPLKIPQ8TAP9 179 aa3.69□□□□□ -1.82
PROM1-220ENST00000540805 PRO0628Q9UI54 55 aa3.69□□□□□ -1.82
PROM1-220ENST00000540805 A8MTW9 85 aa3.68□□□□□ -1.82
PROM1-220ENST00000540805 KRTAP1-1Q07627 177 aa3.68□□□□□ -1.82
PROM1-220ENST00000540805 LYPD5Q6UWN5 251 aa3.68□□□□□ -1.82
PROM1-220ENST00000540805 FUSP35637 526 aaKnown RBP eCLIP3.68□□□□□ -1.82
PROM1-220ENST00000540805 SPINK6Q6UWN8 80 aa3.68□□□□□ -1.82
PROM1-220ENST00000540805 C11orf72Q8NBR9 251 aa3.68□□□□□ -1.82
PROM1-220ENST00000540805 SMIM11BQ8TCY0 68 aa3.68□□□□□ -1.82
PROM1-220ENST00000540805 C16orf95Q9H693 158 aa3.68□□□□□ -1.82
PROM1-220ENST00000540805 TRBV6-8A0A0A6YYG3 113 aa3.68□□□□□ -1.82
PROM1-220ENST00000540805 SYCNQ0VAF6 134 aa3.67□□□□□ -1.82
PROM1-220ENST00000540805 FAM229BQ4G0N7 80 aa3.67□□□□□ -1.82
PROM1-220ENST00000540805 OBSCN-AS1Q96MR7 158 aa3.67□□□□□ -1.82
PROM1-220ENST00000540805 TENM1Q9UKZ4 2725 aa3.67□□□□□ -1.82
PROM1-220ENST00000540805 CDC42SE2Q9NRR3 84 aa3.67□□□□□ -1.82
PROM1-220ENST00000540805 ORMDL1Q9P0S3 153 aa3.67□□□□□ -1.82
PROM1-220ENST00000540805 HIVEP1P15822 2718 aa3.67□□□□□ -1.82
PROM1-220ENST00000540805 H0Y9J4 135 aa3.67□□□□□ -1.82
PROM1-220ENST00000540805 RBM3P98179 157 aaKnown RBP3.67□□□□□ -1.82
PROM1-220ENST00000540805 DIRC1Q969H9 104 aa3.66□□□□□ -1.82
PROM1-220ENST00000540805 ENHOQ6UWT2 76 aa3.66□□□□□ -1.82
PROM1-220ENST00000540805 NTM-AS1Q6ZSK4 140 aa3.66□□□□□ -1.82
PROM1-220ENST00000540805 RPL37AP8A6NKH3 93 aa3.66□□□□□ -1.82
PROM1-220ENST00000540805 C14orf177Q52M58 125 aa3.66□□□□□ -1.82
PROM1-220ENST00000540805 IGLV1-51P01701 117 aa3.65□□□□□ -1.82
PROM1-220ENST00000540805 NREPQ16612 68 aa3.65□□□□□ -1.82
PROM1-220ENST00000540805 NDUFB1O75438 58 aa3.65□□□□□ -1.82
PROM1-220ENST00000540805 ATP5EP2Q5VTU8 51 aa3.65□□□□□ -1.82
PROM1-220ENST00000540805 TRBV6-4A0A1B0GX49 114 aa3.65□□□□□ -1.83
PROM1-220ENST00000540805 CCKP06307 115 aa3.65□□□□□ -1.83
PROM1-220ENST00000540805 C1orf195Q5TG92 126 aa3.65□□□□□ -1.83
PROM1-220ENST00000540805 IBA57-AS1B1ANH7 110 aa3.64□□□□□ -1.83
PROM1-220ENST00000540805 NDUFC2-KCTD14E9PQ53 114 aa3.64□□□□□ -1.83
PROM1-220ENST00000540805 NDUFC2O95298 119 aa3.64□□□□□ -1.83
PROM1-220ENST00000540805 KRTAP24-1Q3LI83 254 aa3.64□□□□□ -1.83
PROM1-220ENST00000540805 V9GYY9 64 aa3.64□□□□□ -1.83
PROM1-220ENST00000540805 A8MU10 97 aa3.64□□□□□ -1.83
PROM1-220ENST00000540805 C7orf33Q8WU49 177 aa3.64□□□□□ -1.83
PROM1-220ENST00000540805 B9D2Q9BPU9 175 aa3.64□□□□□ -1.83
PROM1-220ENST00000540805 JMJD7-PLA2G4BH0Y9G9 81 aa3.64□□□□□ -1.83
PROM1-220ENST00000540805 H7BZZ5 65 aa3.64□□□□□ -1.83
PROM1-220ENST00000540805 COX7BP24311 80 aa3.63□□□□□ -1.83
PROM1-220ENST00000540805 SPATA3Q8NHX4 192 aa3.63□□□□□ -1.83
PROM1-220ENST00000540805 C6orf99Q4VX62 202 aa3.63□□□□□ -1.83
PROM1-220ENST00000540805 C1orf158Q8N1D5 194 aa3.63□□□□□ -1.83
PROM1-220ENST00000540805 FBN1P35555 2871 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms