RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 FP248Q71RG6 208 aaPredicted RBP11.07□□□□□ -0.64
SOD2-212ENST00000540491 MUC17Q685J3 4493 aa11.07□□□□□ -0.64
SOD2-212ENST00000540491 ZNF625Q96I27 306 aaPredicted RBP11.06□□□□□ -0.64
SOD2-212ENST00000540491 HIGD2AQ9BW72 106 aa11.06□□□□□ -0.64
SOD2-212ENST00000540491 PPDPFQ9H3Y8 114 aa11.06□□□□□ -0.64
SOD2-212ENST00000540491 RHEBQ15382 184 aa11.05□□□□□ -0.64
SOD2-212ENST00000540491 C4orf48Q5BLP8 95 aa11.05□□□□□ -0.64
SOD2-212ENST00000540491 TMEM170BQ5T4T1 132 aa11.05□□□□□ -0.64
SOD2-212ENST00000540491 BAGE3Q86Y29 109 aa11.05□□□□□ -0.64
SOD2-212ENST00000540491 C11orf86A6NJI1 115 aa11.03□□□□□ -0.64
SOD2-212ENST00000540491 LINC00158P58513 81 aa11.03□□□□□ -0.64
SOD2-212ENST00000540491 C3orf22Q8N5N4 141 aa11.03□□□□□ -0.64
SOD2-212ENST00000540491 C18orf32Q8TCD1 76 aa11.03□□□□□ -0.64
SOD2-212ENST00000540491 SPRR4Q96PI1 79 aa11.03□□□□□ -0.64
SOD2-212ENST00000540491 Q8NDZ9 215 aa11.01□□□□□ -0.65
SOD2-212ENST00000540491 URB1-AS1Q96HZ7 61 aa11.01□□□□□ -0.65
SOD2-212ENST00000540491 TRAPPC1Q9Y5R8 145 aa11.01□□□□□ -0.65
SOD2-212ENST00000540491 LINC00587B1AMM8 73 aa11□□□□□ -0.65
SOD2-212ENST00000540491 C10orf91Q5T1B1 145 aa11□□□□□ -0.65
SOD2-212ENST00000540491 PRYO14603 147 aa10.99□□□□□ -0.65
SOD2-212ENST00000540491 ATP6V1G1O75348 118 aa10.99□□□□□ -0.65
SOD2-212ENST00000540491 LINC00337Q8N6G1 96 aa10.99□□□□□ -0.65
SOD2-212ENST00000540491 RPS10P5Q9NQ39 176 aa10.99□□□□□ -0.65
SOD2-212ENST00000540491 CHTOPQ9Y3Y2 248 aaKnown RBP10.99□□□□□ -0.65
SOD2-212ENST00000540491 SPINK1P00995 79 aa10.97□□□□□ -0.65
SOD2-212ENST00000540491 KCNQ1DNQ9H478 68 aa10.97□□□□□ -0.65
SOD2-212ENST00000540491 TRAV12-1A0A0B4J245 112 aa10.96□□□□□ -0.65
SOD2-212ENST00000540491 TMEM223A0PJW6 202 aa10.96□□□□□ -0.65
SOD2-212ENST00000540491 SPRR1AP35321 89 aa10.96□□□□□ -0.65
SOD2-212ENST00000540491 HERV-K104P63124 156 aa10.96□□□□□ -0.65
SOD2-212ENST00000540491 S100A12P80511 92 aa10.96□□□□□ -0.65
SOD2-212ENST00000540491 PMCHL1Q16048 86 aa10.95□□□□□ -0.66
SOD2-212ENST00000540491 BOD1L2Q8IYS8 172 aa10.94□□□□□ -0.66
SOD2-212ENST00000540491 ETDCA0A1B0GVM5 59 aa10.93□□□□□ -0.66
SOD2-212ENST00000540491 COMMD7Q86VX2 200 aa10.93□□□□□ -0.66
SOD2-212ENST00000540491 Q8NBF4 154 aa10.93□□□□□ -0.66
SOD2-212ENST00000540491 A0A0U1RRA0 63 aa10.92□□□□□ -0.66
SOD2-212ENST00000540491 IFITM2Q01629 132 aa10.92□□□□□ -0.66
SOD2-212ENST00000540491 MEIG1Q5JSS6 88 aa10.92□□□□□ -0.66
SOD2-212ENST00000540491 SMCR5Q8TEV8 140 aa10.92□□□□□ -0.66
SOD2-212ENST00000540491 MAP1LC3CQ9BXW4 147 aa10.92□□□□□ -0.66
SOD2-212ENST00000540491 SMIM13P0DJ93 91 aa10.91□□□□□ -0.66
SOD2-212ENST00000540491 RPS29P62273 56 aaKnown RBP10.91□□□□□ -0.66
SOD2-212ENST00000540491 KRTAP13-3Q3SY46 172 aa10.91□□□□□ -0.66
SOD2-212ENST00000540491 ASB16-AS1Q495Z4 193 aa10.91□□□□□ -0.66
SOD2-212ENST00000540491 LINC00483Q53H64 154 aa10.91□□□□□ -0.66
SOD2-212ENST00000540491 IFI27L1Q96BM0 104 aa10.91□□□□□ -0.66
SOD2-212ENST00000540491 CHCHD1Q96BP2 118 aaKnown RBP10.91□□□□□ -0.66
SOD2-212ENST00000540491 NDUFA12Q9UI09 145 aa10.91□□□□□ -0.66
SOD2-212ENST00000540491 KRTAP4-16G5E9R7 235 aaPredicted RBP10.9□□□□□ -0.66
SOD2-212ENST00000540491 MIR7-3HGQ8N6C7 128 aa10.9□□□□□ -0.66
SOD2-212ENST00000540491 FAM19A2Q8N3H0 131 aa10.89□□□□□ -0.67
SOD2-212ENST00000540491 SSBP3-AS1Q7Z2R9 100 aa10.88□□□□□ -0.67
SOD2-212ENST00000540491 DAND5Q8N907 189 aa10.88□□□□□ -0.67
SOD2-212ENST00000540491 MYMXA0A1B0GTQ4 84 aa10.87□□□□□ -0.67
SOD2-212ENST00000540491 SEC61BP60468 96 aaKnown RBP10.87□□□□□ -0.67
SOD2-212ENST00000540491 LOC107984156A0A0G2JMH3 177 aa10.86□□□□□ -0.67
SOD2-212ENST00000540491 KRTAP9-6A0A140TA67 174 aa10.86□□□□□ -0.67
SOD2-212ENST00000540491 NCR3O14931 201 aa10.86□□□□□ -0.67
SOD2-212ENST00000540491 ARL17AQ8IVW1 177 aa10.86□□□□□ -0.67
SOD2-212ENST00000540491 TRBV10-3A0A0K0K1G6 114 aa10.85□□□□□ -0.67
SOD2-212ENST00000540491 TRBV10-2A0A0K0K1G8 114 aa10.85□□□□□ -0.67
SOD2-212ENST00000540491 SNAPINO95295 136 aa10.84□□□□□ -0.67
SOD2-212ENST00000540491 B5MCH6 92 aa10.83□□□□□ -0.68
SOD2-212ENST00000540491 LINC01547P58512 204 aaPredicted RBP10.83□□□□□ -0.68
SOD2-212ENST00000540491 NDUFA5Q16718 116 aa10.83□□□□□ -0.68
SOD2-212ENST00000540491 GAGE2AQ6NT46 116 aa10.83□□□□□ -0.68
SOD2-212ENST00000540491 SLC25A20O43772 301 aa10.82□□□□□ -0.68
SOD2-212ENST00000540491 SVBPQ8N300 66 aa10.82□□□□□ -0.68
SOD2-212ENST00000540491 APOC3P02656 99 aa10.8□□□□□ -0.68
SOD2-212ENST00000540491 DDTP30046 118 aa10.8□□□□□ -0.68
SOD2-212ENST00000540491 HSBP1O75506 76 aa10.79□□□□□ -0.68
SOD2-212ENST00000540491 MOBPQ13875 183 aa10.79□□□□□ -0.68
SOD2-212ENST00000540491 Q8N377 158 aa10.79□□□□□ -0.68
SOD2-212ENST00000540491 JOSD1Q15040 202 aaPredicted RBP10.78□□□□□ -0.68
SOD2-212ENST00000540491 Q6ZRX8 168 aa10.78□□□□□ -0.68
SOD2-212ENST00000540491 SPANXB1Q9NS25 103 aaPredicted RBP10.78□□□□□ -0.68
SOD2-212ENST00000540491 IGLV9-49A0A0B4J1Y8 123 aa10.77□□□□□ -0.69
SOD2-212ENST00000540491 MIEN1Q9BRT3 115 aa10.77□□□□□ -0.69
SOD2-212ENST00000540491 C5orf52A6NGY3 159 aa10.76□□□□□ -0.69
SOD2-212ENST00000540491 LEPROTO15243 131 aa10.76□□□□□ -0.69
SOD2-212ENST00000540491 NDUFC2O95298 119 aa10.76□□□□□ -0.69
SOD2-212ENST00000540491 PLNP26678 52 aa10.76□□□□□ -0.69
SOD2-212ENST00000540491 NMUP48645 174 aa10.76□□□□□ -0.69
SOD2-212ENST00000540491 ERC2-IT1O76042 136 aa10.75□□□□□ -0.69
SOD2-212ENST00000540491 CBY1Q9Y3M2 126 aa10.75□□□□□ -0.69
SOD2-212ENST00000540491 Q9BRP9 147 aa10.74□□□□□ -0.69
SOD2-212ENST00000540491 IGLV6-57P01721 117 aa10.73□□□□□ -0.69
SOD2-212ENST00000540491 HERVK_113P61574 105 aa10.73□□□□□ -0.69
SOD2-212ENST00000540491 S100A7L2Q5SY68 101 aa10.73□□□□□ -0.69
SOD2-212ENST00000540491 YPEL4Q96NS1 127 aa10.73□□□□□ -0.69
SOD2-212ENST00000540491 J3QQQ9 107 aa10.72□□□□□ -0.69
SOD2-212ENST00000540491 LEPROTL1O95214 131 aa10.72□□□□□ -0.69
SOD2-212ENST00000540491 XP32Q5T750 250 aa10.72□□□□□ -0.69
SOD2-212ENST00000540491 TSPEAR-AS2P59090 65 aa10.7□□□□□ -0.7
SOD2-212ENST00000540491 TRAV23DV6A0A075B6W5 121 aa10.69□□□□□ -0.7
SOD2-212ENST00000540491 H0Y8G0 127 aa10.69□□□□□ -0.7
SOD2-212ENST00000540491 HINT1P49773 126 aaPredicted RBP10.69□□□□□ -0.7
SOD2-212ENST00000540491 HSPB8Q9UJY1 196 aa10.69□□□□□ -0.7
SOD2-212ENST00000540491 LGALS3P17931 250 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms