RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 SCGB1D1O95968 90 aa9.29□□□□□ -0.92
MDM1-210ENST00000540418 ANKRD39Q53RE8 183 aa9.29□□□□□ -0.92
MDM1-210ENST00000540418 MIR7-3HGQ8N6C7 128 aa9.29□□□□□ -0.92
MDM1-210ENST00000540418 A0A0J9YXY3 114 aa9.28□□□□□ -0.92
MDM1-210ENST00000540418 TP73-AS1Q9UF72 201 aa9.28□□□□□ -0.92
MDM1-210ENST00000540418 LBHQ53QV2 105 aaPredicted RBP9.28□□□□□ -0.92
MDM1-210ENST00000540418 IGLV5-37A0A075B6J1 123 aa9.27□□□□□ -0.93
MDM1-210ENST00000540418 ZNF815PA8K554 130 aa9.27□□□□□ -0.93
MDM1-210ENST00000540418 RPL24P83731 157 aaKnown RBP9.27□□□□□ -0.93
MDM1-210ENST00000540418 HSBP1L1C9JCN9 74 aa9.26□□□□□ -0.93
MDM1-210ENST00000540418 TTTY13Q9BZ97 58 aa9.26□□□□□ -0.93
MDM1-210ENST00000540418 SRRM2Q9UQ35 2752 aaKnown RBP9.26□□□□□ -0.93
MDM1-210ENST00000540418 PRR3P79522 188 aaKnown RBP9.26□□□□□ -0.93
MDM1-210ENST00000540418 MRPL55Q7Z7F7 128 aaKnown RBP9.26□□□□□ -0.93
MDM1-210ENST00000540418 INAFM2P0DMQ5 153 aa9.25□□□□□ -0.93
MDM1-210ENST00000540418 VPREB1P12018 145 aa9.25□□□□□ -0.93
MDM1-210ENST00000540418 UBE2BP63146 152 aa9.25□□□□□ -0.93
MDM1-210ENST00000540418 NKAPP1Q8N9T2 125 aa9.25□□□□□ -0.93
MDM1-210ENST00000540418 DAND5Q8N907 189 aa9.25□□□□□ -0.93
MDM1-210ENST00000540418 PSORS1C2Q9UIG4 136 aa9.25□□□□□ -0.93
MDM1-210ENST00000540418 VPS13BQ7Z7G8 4022 aa9.25□□□□□ -0.93
MDM1-210ENST00000540418 KRTAP11-1Q8IUC1 163 aa9.24□□□□□ -0.93
MDM1-210ENST00000540418 TIMM17BO60830 172 aa9.24□□□□□ -0.93
MDM1-210ENST00000540418 LOC107984156A0A0G2JMH3 177 aa9.23□□□□□ -0.93
MDM1-210ENST00000540418 ADAMTSL4-AS1Q5T5F5 129 aa9.23□□□□□ -0.93
MDM1-210ENST00000540418 ARL17AQ8IVW1 177 aa9.23□□□□□ -0.93
MDM1-210ENST00000540418 Q8NDZ9 215 aa9.23□□□□□ -0.93
MDM1-210ENST00000540418 LINC00167Q96N53 147 aa9.23□□□□□ -0.93
MDM1-210ENST00000540418 PCP2Q8IVA1 136 aa9.23□□□□□ -0.93
MDM1-210ENST00000540418 BOD1L2Q8IYS8 172 aa9.23□□□□□ -0.93
MDM1-210ENST00000540418 JOSD1Q15040 202 aaPredicted RBP9.22□□□□□ -0.93
MDM1-210ENST00000540418 LITAFQ99732 161 aa9.21□□□□□ -0.94
MDM1-210ENST00000540418 GAGE10A6NGK3 116 aa9.21□□□□□ -0.94
MDM1-210ENST00000540418 C1orf137Q5JT78 98 aa9.21□□□□□ -0.94
MDM1-210ENST00000540418 SCGB1D4Q6XE38 83 aa9.21□□□□□ -0.94
MDM1-210ENST00000540418 RPL37AP8A6NKH3 93 aa9.2□□□□□ -0.94
MDM1-210ENST00000540418 MIEN1Q9BRT3 115 aa9.2□□□□□ -0.94
MDM1-210ENST00000540418 HNRNPA3P51991 378 aaKnown RBP9.2□□□□□ -0.94
MDM1-210ENST00000540418 M0R378 163 aa9.19□□□□□ -0.94
MDM1-210ENST00000540418 IGLV1-50A0A075B6I6 118 aa9.17□□□□□ -0.94
MDM1-210ENST00000540418 NPC2P61916 151 aa9.17□□□□□ -0.94
MDM1-210ENST00000540418 SOSTDC1Q6X4U4 206 aa9.17□□□□□ -0.94
MDM1-210ENST00000540418 TMEM238C9JI98 176 aa9.16□□□□□ -0.94
MDM1-210ENST00000540418 LINC00308Q8TCZ7 52 aa9.16□□□□□ -0.94
MDM1-210ENST00000540418 EIF4EBP3O60516 100 aaPredicted RBP9.16□□□□□ -0.94
MDM1-210ENST00000540418 NDUFC2O95298 119 aa9.16□□□□□ -0.94
MDM1-210ENST00000540418 IGLV7-43P04211 117 aa9.16□□□□□ -0.94
MDM1-210ENST00000540418 SRSF9Q13242 221 aaKnown RBP eCLIP9.16□□□□□ -0.94
MDM1-210ENST00000540418 IGKV2-28A0A075B6P5 120 aa9.15□□□□□ -0.94
MDM1-210ENST00000540418 IGKV2D-28P01615 120 aa9.15□□□□□ -0.94
MDM1-210ENST00000540418 SPANXDQ9BXN6 97 aa9.15□□□□□ -0.94
MDM1-210ENST00000540418 SPANXCQ9NY87 97 aa9.15□□□□□ -0.94
MDM1-210ENST00000540418 NCR3O14931 201 aa9.15□□□□□ -0.94
MDM1-210ENST00000540418 SPINK6Q6UWN8 80 aa9.15□□□□□ -0.94
MDM1-210ENST00000540418 ABCA13Q86UQ4 5058 aa9.15□□□□□ -0.95
MDM1-210ENST00000540418 VAMP8Q9BV40 100 aa9.14□□□□□ -0.95
MDM1-210ENST00000540418 PYY3Q5JQD4 70 aa9.14□□□□□ -0.95
MDM1-210ENST00000540418 Q6ZVH6 145 aa9.14□□□□□ -0.95
MDM1-210ENST00000540418 TRBV10-2A0A0K0K1G8 114 aa9.13□□□□□ -0.95
MDM1-210ENST00000540418 SPANXB1Q9NS25 103 aaPredicted RBP9.13□□□□□ -0.95
MDM1-210ENST00000540418 PAM16Q9Y3D7 125 aa9.13□□□□□ -0.95
MDM1-210ENST00000540418 BCE1O60756 84 aa9.13□□□□□ -0.95
MDM1-210ENST00000540418 COX8AP10176 69 aa9.13□□□□□ -0.95
MDM1-210ENST00000540418 SPATA45Q537H7 98 aa9.13□□□□□ -0.95
MDM1-210ENST00000540418 IFITM1P13164 125 aa9.12□□□□□ -0.95
MDM1-210ENST00000540418 COPS9Q8WXC6 57 aa9.12□□□□□ -0.95
MDM1-210ENST00000540418 DLEU1O43261 78 aa9.11□□□□□ -0.95
MDM1-210ENST00000540418 REG3GQ6UW15 175 aa9.11□□□□□ -0.95
MDM1-210ENST00000540418 TMEM126AQ9H061 195 aa9.1□□□□□ -0.95
MDM1-210ENST00000540418 PPDPFQ9H3Y8 114 aa9.1□□□□□ -0.95
MDM1-210ENST00000540418 C14orf144Q96I85 54 aa9.1□□□□□ -0.95
MDM1-210ENST00000540418 TRBV10-3A0A0K0K1G6 114 aa9.09□□□□□ -0.95
MDM1-210ENST00000540418 PCLOQ9Y6V0 5065 aa9.09□□□□□ -0.95
MDM1-210ENST00000540418 ZNF861PO60384 105 aa9.09□□□□□ -0.95
MDM1-210ENST00000540418 MUSTN1Q8IVN3 82 aa9.09□□□□□ -0.95
MDM1-210ENST00000540418 KCNQ1DNQ9H478 68 aa9.09□□□□□ -0.95
MDM1-210ENST00000540418 DDTP30046 118 aa9.08□□□□□ -0.96
MDM1-210ENST00000540418 DIRC1Q969H9 104 aa9.08□□□□□ -0.96
MDM1-210ENST00000540418 S100A7L2Q5SY68 101 aa9.08□□□□□ -0.96
MDM1-210ENST00000540418 PRYO14603 147 aa9.07□□□□□ -0.96
MDM1-210ENST00000540418 RPL28P46779 137 aaKnown RBP9.07□□□□□ -0.96
MDM1-210ENST00000540418 S100A12P80511 92 aa9.07□□□□□ -0.96
MDM1-210ENST00000540418 IGLV6-57P01721 117 aa9.07□□□□□ -0.96
MDM1-210ENST00000540418 LINC00518Q8N0U6 118 aa9.07□□□□□ -0.96
MDM1-210ENST00000540418 PKHD1L1Q86WI1 4243 aa9.07□□□□□ -0.96
MDM1-210ENST00000540418 UBE2AP49459 152 aa9.06□□□□□ -0.96
MDM1-210ENST00000540418 KRTAP29-1A8MX34 341 aaPredicted RBP9.06□□□□□ -0.96
MDM1-210ENST00000540418 OXTP01178 125 aa9.06□□□□□ -0.96
MDM1-210ENST00000540418 SLC25A34Q6PIV7 304 aa9.06□□□□□ -0.96
MDM1-210ENST00000540418 FLG2Q5D862 2391 aaPredicted RBP9.05□□□□□ -0.96
MDM1-210ENST00000540418 H0Y9J4 135 aa9.05□□□□□ -0.96
MDM1-210ENST00000540418 FAM19A1Q7Z5A9 133 aa9.05□□□□□ -0.96
MDM1-210ENST00000540418 KRTAP13-1Q8IUC0 172 aa9.05□□□□□ -0.96
MDM1-210ENST00000540418 SPRR1AP35321 89 aa9.04□□□□□ -0.96
MDM1-210ENST00000540418 LINC00337Q8N6G1 96 aa9.03□□□□□ -0.96
MDM1-210ENST00000540418 OR13C6PQ8NH95 151 aa9.03□□□□□ -0.96
MDM1-210ENST00000540418 HIST1H4GQ99525 98 aa9.03□□□□□ -0.96
MDM1-210ENST00000540418 HIGD1BQ9P298 99 aa9.03□□□□□ -0.96
MDM1-210ENST00000540418 CBY1Q9Y3M2 126 aa9.03□□□□□ -0.96
MDM1-210ENST00000540418 MYCBP2O75592 4640 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms