RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 IFITM2Q01629 132 aa8.95□□□□□ -0.98
UBE3B-211ENST00000539843 PMCHL1Q16048 86 aa8.95□□□□□ -0.98
UBE3B-211ENST00000539843 C10orf91Q5T1B1 145 aa8.95□□□□□ -0.98
UBE3B-211ENST00000539843 CHTOPQ9Y3Y2 248 aaKnown RBP8.95□□□□□ -0.98
UBE3B-211ENST00000539843 KRTAP13-2Q52LG2 175 aa8.94□□□□□ -0.98
UBE3B-211ENST00000539843 HIGD2AQ9BW72 106 aa8.94□□□□□ -0.98
UBE3B-211ENST00000539843 ZNF706Q9Y5V0 76 aaPredicted RBP8.94□□□□□ -0.98
UBE3B-211ENST00000539843 M0R378 163 aa8.93□□□□□ -0.98
UBE3B-211ENST00000539843 SNAPINO95295 136 aa8.92□□□□□ -0.98
UBE3B-211ENST00000539843 S100A12P80511 92 aa8.92□□□□□ -0.98
UBE3B-211ENST00000539843 CDIP1Q9H305 208 aa8.92□□□□□ -0.98
UBE3B-211ENST00000539843 LINC00587B1AMM8 73 aa8.91□□□□□ -0.98
UBE3B-211ENST00000539843 APOC3P02656 99 aa8.91□□□□□ -0.98
UBE3B-211ENST00000539843 C4orf48Q5BLP8 95 aa8.91□□□□□ -0.98
UBE3B-211ENST00000539843 MEIG1Q5JSS6 88 aa8.91□□□□□ -0.98
UBE3B-211ENST00000539843 SVBPQ8N300 66 aa8.91□□□□□ -0.98
UBE3B-211ENST00000539843 URB1-AS1Q96HZ7 61 aa8.91□□□□□ -0.98
UBE3B-211ENST00000539843 RETNLBQ9BQ08 111 aa8.91□□□□□ -0.98
UBE3B-211ENST00000539843 SPAG11AQ6PDA7 123 aa8.9□□□□□ -0.98
UBE3B-211ENST00000539843 CHCHD1Q96BP2 118 aaKnown RBP8.9□□□□□ -0.98
UBE3B-211ENST00000539843 PLEKHB2Q96CS7 222 aa8.9□□□□□ -0.98
UBE3B-211ENST00000539843 IGLV7-46A0A075B6I9 117 aa8.89□□□□□ -0.99
UBE3B-211ENST00000539843 TRAV12-1A0A0B4J245 112 aa8.89□□□□□ -0.99
UBE3B-211ENST00000539843 A0A0U1RRA0 63 aa8.89□□□□□ -0.99
UBE3B-211ENST00000539843 HERV-K104P63124 156 aa8.89□□□□□ -0.99
UBE3B-211ENST00000539843 IFI27L1Q96BM0 104 aa8.89□□□□□ -0.99
UBE3B-211ENST00000539843 TMEM223A0PJW6 202 aa8.88□□□□□ -0.99
UBE3B-211ENST00000539843 PRYO14603 147 aa8.88□□□□□ -0.99
UBE3B-211ENST00000539843 TPRXLQ17RH7 258 aa8.88□□□□□ -0.99
UBE3B-211ENST00000539843 MAP1LC3CQ9BXW4 147 aa8.88□□□□□ -0.99
UBE3B-211ENST00000539843 BOD1L2Q8IYS8 172 aa8.87□□□□□ -0.99
UBE3B-211ENST00000539843 ETDCA0A1B0GVM5 59 aa8.85□□□□□ -0.99
UBE3B-211ENST00000539843 HSBP1O75506 76 aa8.85□□□□□ -0.99
UBE3B-211ENST00000539843 SMIM13P0DJ93 91 aa8.85□□□□□ -0.99
UBE3B-211ENST00000539843 SPRR4Q96PI1 79 aa8.85□□□□□ -0.99
UBE3B-211ENST00000539843 MYMXA0A1B0GTQ4 84 aa8.84□□□□□ -0.99
UBE3B-211ENST00000539843 C3orf22Q8N5N4 141 aa8.84□□□□□ -0.99
UBE3B-211ENST00000539843 MIR7-3HGQ8N6C7 128 aa8.84□□□□□ -0.99
UBE3B-211ENST00000539843 Q8NDZ9 215 aa8.84□□□□□ -0.99
UBE3B-211ENST00000539843 NCR3O14931 201 aa8.83□□□□□ -1
UBE3B-211ENST00000539843 LINC00337Q8N6G1 96 aa8.83□□□□□ -1
UBE3B-211ENST00000539843 NDUFA12Q9UI09 145 aa8.83□□□□□ -1
UBE3B-211ENST00000539843 FP248Q71RG6 208 aaPredicted RBP8.82□□□□□ -1
UBE3B-211ENST00000539843 PPDPFQ9H3Y8 114 aa8.82□□□□□ -1
UBE3B-211ENST00000539843 H0Y8G0 127 aa8.81□□□□□ -1
UBE3B-211ENST00000539843 MIEN1Q9BRT3 115 aa8.81□□□□□ -1
UBE3B-211ENST00000539843 KCNQ1DNQ9H478 68 aa8.81□□□□□ -1
UBE3B-211ENST00000539843 MUC2Q02817 5179 aa8.79□□□□□ -1
UBE3B-211ENST00000539843 HERVK_113P61574 105 aa8.79□□□□□ -1
UBE3B-211ENST00000539843 Q8NBF4 154 aa8.78□□□□□ -1
UBE3B-211ENST00000539843 SMCR5Q8TEV8 140 aa8.78□□□□□ -1
UBE3B-211ENST00000539843 KRTAP3-3Q9BYR6 98 aa8.78□□□□□ -1
UBE3B-211ENST00000539843 KRTAP3-2Q9BYR7 98 aa8.78□□□□□ -1
UBE3B-211ENST00000539843 TRBV10-3A0A0K0K1G6 114 aa8.77□□□□□ -1.01
UBE3B-211ENST00000539843 LEPROTL1O95214 131 aa8.77□□□□□ -1.01
UBE3B-211ENST00000539843 SPINK1P00995 79 aa8.77□□□□□ -1.01
UBE3B-211ENST00000539843 PLNP26678 52 aa8.77□□□□□ -1.01
UBE3B-211ENST00000539843 SPRR1AP35321 89 aa8.77□□□□□ -1.01
UBE3B-211ENST00000539843 FAM19A2Q8N3H0 131 aa8.76□□□□□ -1.01
UBE3B-211ENST00000539843 LEPROTO15243 131 aa8.75□□□□□ -1.01
UBE3B-211ENST00000539843 DDTP30046 118 aa8.75□□□□□ -1.01
UBE3B-211ENST00000539843 GAGE2AQ6NT46 116 aa8.75□□□□□ -1.01
UBE3B-211ENST00000539843 HSPB8Q9UJY1 196 aa8.75□□□□□ -1.01
UBE3B-211ENST00000539843 TRBV10-2A0A0K0K1G8 114 aa8.74□□□□□ -1.01
UBE3B-211ENST00000539843 LGALS3P17931 250 aaKnown RBP8.74□□□□□ -1.01
UBE3B-211ENST00000539843 NMUP48645 174 aa8.74□□□□□ -1.01
UBE3B-211ENST00000539843 S100A7L2Q5SY68 101 aa8.74□□□□□ -1.01
UBE3B-211ENST00000539843 DAND5Q8N907 189 aa8.74□□□□□ -1.01
UBE3B-211ENST00000539843 SPANXB1Q9NS25 103 aaPredicted RBP8.74□□□□□ -1.01
UBE3B-211ENST00000539843 JOSD1Q15040 202 aaPredicted RBP8.73□□□□□ -1.01
UBE3B-211ENST00000539843 KRTAP4-16G5E9R7 235 aaPredicted RBP8.72□□□□□ -1.01
UBE3B-211ENST00000539843 J3QQQ9 107 aa8.72□□□□□ -1.01
UBE3B-211ENST00000539843 DPM2O94777 84 aa8.72□□□□□ -1.01
UBE3B-211ENST00000539843 LINC00483Q53H64 154 aa8.72□□□□□ -1.01
UBE3B-211ENST00000539843 YPEL4Q96NS1 127 aa8.72□□□□□ -1.01
UBE3B-211ENST00000539843 CBY1Q9Y3M2 126 aa8.72□□□□□ -1.01
UBE3B-211ENST00000539843 IGLV9-49A0A0B4J1Y8 123 aa8.71□□□□□ -1.02
UBE3B-211ENST00000539843 B5MCH6 92 aa8.71□□□□□ -1.02
UBE3B-211ENST00000539843 SSBP3-AS1Q7Z2R9 100 aa8.71□□□□□ -1.02
UBE3B-211ENST00000539843 LOC107984156A0A0G2JMH3 177 aa8.7□□□□□ -1.02
UBE3B-211ENST00000539843 TRGC2P03986 189 aa8.7□□□□□ -1.02
UBE3B-211ENST00000539843 MOBPQ13875 183 aa8.7□□□□□ -1.02
UBE3B-211ENST00000539843 ARL17AQ8IVW1 177 aa8.7□□□□□ -1.02
UBE3B-211ENST00000539843 SERF1AO75920 110 aa8.69□□□□□ -1.02
UBE3B-211ENST00000539843 NDUFC2O95298 119 aa8.69□□□□□ -1.02
UBE3B-211ENST00000539843 IGKCP01834 107 aa8.69□□□□□ -1.02
UBE3B-211ENST00000539843 HINT1P49773 126 aaPredicted RBP8.69□□□□□ -1.02
UBE3B-211ENST00000539843 RPS29P62273 56 aaKnown RBP8.69□□□□□ -1.02
UBE3B-211ENST00000539843 Q6ZRX8 168 aa8.69□□□□□ -1.02
UBE3B-211ENST00000539843 TRAV23DV6A0A075B6W5 121 aa8.68□□□□□ -1.02
UBE3B-211ENST00000539843 TSPEAR-AS2P59090 65 aa8.68□□□□□ -1.02
UBE3B-211ENST00000539843 FABP4P15090 132 aa8.67□□□□□ -1.02
UBE3B-211ENST00000539843 C9orf153Q5TBE3 101 aa8.67□□□□□ -1.02
UBE3B-211ENST00000539843 SLC25A20O43772 301 aa8.66□□□□□ -1.02
UBE3B-211ENST00000539843 SEC61BP60468 96 aaKnown RBP8.66□□□□□ -1.02
UBE3B-211ENST00000539843 KRTAP13-3Q3SY46 172 aa8.66□□□□□ -1.02
UBE3B-211ENST00000539843 MUC17Q685J3 4493 aa8.66□□□□□ -1.02
UBE3B-211ENST00000539843 LCE2AQ5TA79 106 aaPredicted RBP8.65□□□□□ -1.02
UBE3B-211ENST00000539843 ZNF73O43830 326 aaPredicted RBP8.64□□□□□ -1.03
UBE3B-211ENST00000539843 IGLV6-57P01721 117 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms