RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 CRYGAP11844 174 aa11.62□□□□□ -0.55
PCDHB17P-201ENST00000539533 FAM19A5Q7Z5A7 132 aaPredicted RBP11.62□□□□□ -0.55
PCDHB17P-201ENST00000539533 LINC00158P58513 81 aa11.61□□□□□ -0.55
PCDHB17P-201ENST00000539533 hADV29S1A0JD25 119 aa11.61□□□□□ -0.55
PCDHB17P-201ENST00000539533 HIST1H4AP62805 103 aaKnown RBP11.61□□□□□ -0.55
PCDHB17P-201ENST00000539533 ESRGQ1W209 222 aa11.61□□□□□ -0.55
PCDHB17P-201ENST00000539533 TRAV10A0A0B4J240 114 aa11.6□□□□□ -0.55
PCDHB17P-201ENST00000539533 IGHV3OR16-9A0A0B4J2B5 98 aa11.6□□□□□ -0.55
PCDHB17P-201ENST00000539533 SMIM11BQ8TCY0 68 aa11.6□□□□□ -0.55
PCDHB17P-201ENST00000539533 C5orf47Q569G3 176 aa11.6□□□□□ -0.55
PCDHB17P-201ENST00000539533 STAB2Q8WWQ8 2551 aa11.59□□□□□ -0.55
PCDHB17P-201ENST00000539533 A0A087WYN8 130 aa11.59□□□□□ -0.55
PCDHB17P-201ENST00000539533 XCL1P47992 114 aa11.59□□□□□ -0.55
PCDHB17P-201ENST00000539533 CCL18P55774 89 aa11.59□□□□□ -0.55
PCDHB17P-201ENST00000539533 B9D2Q9BPU9 175 aa11.59□□□□□ -0.55
PCDHB17P-201ENST00000539533 DNAL4O96015 105 aa11.59□□□□□ -0.55
PCDHB17P-201ENST00000539533 REG3AQ06141 175 aa11.59□□□□□ -0.55
PCDHB17P-201ENST00000539533 SS18Q15532 418 aa11.59□□□□□ -0.55
PCDHB17P-201ENST00000539533 WFDC10BQ8IUB3 73 aa11.59□□□□□ -0.55
PCDHB17P-201ENST00000539533 IGLV10-54A0A075B6I4 117 aa11.57□□□□□ -0.56
PCDHB17P-201ENST00000539533 IBA57-AS1B1ANH7 110 aa11.57□□□□□ -0.56
PCDHB17P-201ENST00000539533 CYSTM1Q9H1C7 97 aa11.57□□□□□ -0.56
PCDHB17P-201ENST00000539533 KLK12Q9UKR0 248 aa11.56□□□□□ -0.56
PCDHB17P-201ENST00000539533 A0A087WZ39 114 aa11.56□□□□□ -0.56
PCDHB17P-201ENST00000539533 IGKV3D-7A0A0C4DH55 119 aa11.56□□□□□ -0.56
PCDHB17P-201ENST00000539533 H0YGX0 51 aa11.56□□□□□ -0.56
PCDHB17P-201ENST00000539533 RPL18AQ02543 176 aaKnown RBP11.56□□□□□ -0.56
PCDHB17P-201ENST00000539533 PFN2P35080 140 aa11.55□□□□□ -0.56
PCDHB17P-201ENST00000539533 C9orf129Q5T035 196 aaKnown RBP11.55□□□□□ -0.56
PCDHB17P-201ENST00000539533 C14orf132Q9NPU4 83 aa11.55□□□□□ -0.56
PCDHB17P-201ENST00000539533 RPS28P62857 69 aaKnown RBP11.54□□□□□ -0.56
PCDHB17P-201ENST00000539533 CHCHD10Q8WYQ3 142 aaPredicted RBP11.54□□□□□ -0.56
PCDHB17P-201ENST00000539533 MEGF8Q7Z7M0 2845 aa11.54□□□□□ -0.56
PCDHB17P-201ENST00000539533 ENHOQ6UWT2 76 aa11.52□□□□□ -0.57
PCDHB17P-201ENST00000539533 OR13C6PQ8NH95 151 aa11.52□□□□□ -0.57
PCDHB17P-201ENST00000539533 PRR34Q9NV39 138 aa11.52□□□□□ -0.57
PCDHB17P-201ENST00000539533 A0A087WVE0 104 aa11.52□□□□□ -0.57
PCDHB17P-201ENST00000539533 LECT2O14960 151 aa11.52□□□□□ -0.57
PCDHB17P-201ENST00000539533 OBSCN-AS1Q96MR7 158 aa11.52□□□□□ -0.57
PCDHB17P-201ENST00000539533 Q6JHZ5 121 aa11.51□□□□□ -0.57
PCDHB17P-201ENST00000539533 CD164L2Q6UWJ8 174 aa11.51□□□□□ -0.57
PCDHB17P-201ENST00000539533 LINC00846Q9NV44 126 aa11.51□□□□□ -0.57
PCDHB17P-201ENST00000539533 SERP2Q8N6R1 65 aa11.5□□□□□ -0.57
PCDHB17P-201ENST00000539533 PRKDCP78527 4128 aaKnown RBP11.49□□□□□ -0.57
PCDHB17P-201ENST00000539533 TMEM258P61165 79 aa11.49□□□□□ -0.57
PCDHB17P-201ENST00000539533 C6orf226Q5I0X4 101 aa11.49□□□□□ -0.57
PCDHB17P-201ENST00000539533 DPH3Q96FX2 82 aa11.48□□□□□ -0.57
PCDHB17P-201ENST00000539533 UPK3BQ9BT76 320 aa11.48□□□□□ -0.57
PCDHB17P-201ENST00000539533 LINC00588Q9Y4M8 146 aa11.47□□□□□ -0.57
PCDHB17P-201ENST00000539533 NCR3O14931 201 aa11.47□□□□□ -0.57
PCDHB17P-201ENST00000539533 SLPIP03973 132 aa11.47□□□□□ -0.57
PCDHB17P-201ENST00000539533 KRTAP21-3Q3LHN1 58 aa11.46□□□□□ -0.57
PCDHB17P-201ENST00000539533 LINC01561Q8N1V8 128 aa11.46□□□□□ -0.57
PCDHB17P-201ENST00000539533 USP17L23D6RBM5 183 aa11.46□□□□□ -0.58
PCDHB17P-201ENST00000539533 DSCR8Q96T75 97 aa11.46□□□□□ -0.58
PCDHB17P-201ENST00000539533 LINC01556Q5JQF7 62 aa11.45□□□□□ -0.58
PCDHB17P-201ENST00000539533 CSMD3Q7Z407 3707 aa11.43□□□□□ -0.58
PCDHB17P-201ENST00000539533 ORMDL1Q9P0S3 153 aa11.43□□□□□ -0.58
PCDHB17P-201ENST00000539533 Q8IZM0 81 aa11.43□□□□□ -0.58
PCDHB17P-201ENST00000539533 OXTP01178 125 aa11.42□□□□□ -0.58
PCDHB17P-201ENST00000539533 LYSTQ99698 3801 aa11.42□□□□□ -0.58
PCDHB17P-201ENST00000539533 DNAH10OSP0CZ25 163 aa11.41□□□□□ -0.58
PCDHB17P-201ENST00000539533 KIAA0087Q14695 138 aa11.41□□□□□ -0.58
PCDHB17P-201ENST00000539533 LINC00167Q96N53 147 aa11.39□□□□□ -0.59
PCDHB17P-201ENST00000539533 KRTAP26-1Q6PEX3 210 aa11.39□□□□□ -0.59
PCDHB17P-201ENST00000539533 PRR3P79522 188 aaKnown RBP11.38□□□□□ -0.59
PCDHB17P-201ENST00000539533 CCKP06307 115 aa11.38□□□□□ -0.59
PCDHB17P-201ENST00000539533 DYNC2H1Q8NCM8 4307 aaKnown RBP11.37□□□□□ -0.59
PCDHB17P-201ENST00000539533 C4orf26Q17RF5 130 aa11.36□□□□□ -0.59
PCDHB17P-201ENST00000539533 Q8N814 137 aa11.36□□□□□ -0.59
PCDHB17P-201ENST00000539533 APLNQ9ULZ1 77 aa11.36□□□□□ -0.59
PCDHB17P-201ENST00000539533 TENM2Q9NT68 2774 aa11.36□□□□□ -0.59
PCDHB17P-201ENST00000539533 C6orf223Q8N319 242 aa11.36□□□□□ -0.59
PCDHB17P-201ENST00000539533 IGKV2D-24A0A075B6R9 120 aa11.35□□□□□ -0.59
PCDHB17P-201ENST00000539533 C1orf43Q9BWL3 253 aa11.35□□□□□ -0.59
PCDHB17P-201ENST00000539533 JMJD7-PLA2G4BH0Y9G9 81 aa11.34□□□□□ -0.59
PCDHB17P-201ENST00000539533 NDUFC2O95298 119 aa11.34□□□□□ -0.59
PCDHB17P-201ENST00000539533 GHRHP01286 108 aa11.34□□□□□ -0.59
PCDHB17P-201ENST00000539533 SPAG11BQ08648 103 aa11.34□□□□□ -0.59
PCDHB17P-201ENST00000539533 PLECQ15149 4684 aaKnown RBP11.34□□□□□ -0.59
PCDHB17P-201ENST00000539533 TRAV23DV6A0A075B6W5 121 aa11.33□□□□□ -0.6
PCDHB17P-201ENST00000539533 TMEM256-PLSCR3K7ERE1 68 aa11.33□□□□□ -0.6
PCDHB17P-201ENST00000539533 COX17Q14061 63 aa11.33□□□□□ -0.6
PCDHB17P-201ENST00000539533 Q5XG85 94 aa11.33□□□□□ -0.6
PCDHB17P-201ENST00000539533 HRCT1Q6UXD1 115 aa11.33□□□□□ -0.6
PCDHB17P-201ENST00000539533 S100A7L2Q5SY68 101 aa11.32□□□□□ -0.6
PCDHB17P-201ENST00000539533 C10orf25Q5T742 122 aa11.32□□□□□ -0.6
PCDHB17P-201ENST00000539533 C9orf116Q5BN46 136 aaPredicted RBP11.32□□□□□ -0.6
PCDHB17P-201ENST00000539533 DNAH7Q8WXX0 4024 aa11.32□□□□□ -0.6
PCDHB17P-201ENST00000539533 UNQ6190/PRO20217Q6UXQ8 127 aa11.31□□□□□ -0.6
PCDHB17P-201ENST00000539533 DNAH1Q9P2D7 4330 aa11.31□□□□□ -0.6
PCDHB17P-201ENST00000539533 FAM19A1Q7Z5A9 133 aa11.31□□□□□ -0.6
PCDHB17P-201ENST00000539533 HIGD2BQ4VC39 106 aa11.3□□□□□ -0.6
PCDHB17P-201ENST00000539533 FBN3Q75N90 2809 aa11.29□□□□□ -0.6
PCDHB17P-201ENST00000539533 NUPR2A6NF83 97 aa11.29□□□□□ -0.6
PCDHB17P-201ENST00000539533 ATP5EP2Q5VTU8 51 aa11.29□□□□□ -0.6
PCDHB17P-201ENST00000539533 C15orf56Q8N910 161 aa11.29□□□□□ -0.6
PCDHB17P-201ENST00000539533 STARD9Q9P2P6 4700 aa11.29□□□□□ -0.6
PCDHB17P-201ENST00000539533 C6orf99Q4VX62 202 aa11.28□□□□□ -0.6
PCDHB17P-201ENST00000539533 UBE2DNLQ8IWF7 75 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms