RNA–Protein interactions for RNA: ENST00000539399.1

TM7SF3-207, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 4

Gene TM7SF3, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-207ENST00000539399 PLNP26678 52 aa15.03■□□□□ -0
TM7SF3-207ENST00000539399 RPL13AP40429 203 aaKnown RBP15.03■□□□□ -0
TM7SF3-207ENST00000539399 LPAP08519 4548 aa15.02■□□□□ -0
TM7SF3-207ENST00000539399 ATP6V1G1O75348 118 aa15.02■□□□□ -0
TM7SF3-207ENST00000539399 HERV-K104P63124 156 aa15.02■□□□□ -0
TM7SF3-207ENST00000539399 IGKV2-28A0A075B6P5 120 aa15.01□□□□□ -0.01
TM7SF3-207ENST00000539399 IGKV2D-28P01615 120 aa15.01□□□□□ -0.01
TM7SF3-207ENST00000539399 LINC00587B1AMM8 73 aa15□□□□□ -0.01
TM7SF3-207ENST00000539399 FABP4P15090 132 aa15□□□□□ -0.01
TM7SF3-207ENST00000539399 UBE2AP49459 152 aa15□□□□□ -0.01
TM7SF3-207ENST00000539399 MEIG1Q5JSS6 88 aa15□□□□□ -0.01
TM7SF3-207ENST00000539399 A0A0U1RRA0 63 aa14.98□□□□□ -0.01
TM7SF3-207ENST00000539399 NDUFA12Q9UI09 145 aa14.98□□□□□ -0.01
TM7SF3-207ENST00000539399 MYMXA0A1B0GTQ4 84 aa14.97□□□□□ -0.01
TM7SF3-207ENST00000539399 HERVK_113P61574 105 aa14.97□□□□□ -0.01
TM7SF3-207ENST00000539399 DPM2O94777 84 aa14.96□□□□□ -0.01
TM7SF3-207ENST00000539399 SMIM13P0DJ93 91 aa14.96□□□□□ -0.01
TM7SF3-207ENST00000539399 PLEKHB2Q96CS7 222 aa14.95□□□□□ -0.02
TM7SF3-207ENST00000539399 MAP1LC3CQ9BXW4 147 aa14.95□□□□□ -0.02
TM7SF3-207ENST00000539399 LEPROTO15243 131 aa14.94□□□□□ -0.02
TM7SF3-207ENST00000539399 IGKCP01834 107 aa14.93□□□□□ -0.02
TM7SF3-207ENST00000539399 TMEM126AQ9H061 195 aa14.93□□□□□ -0.02
TM7SF3-207ENST00000539399 KRTAP13-1Q8IUC0 172 aa14.92□□□□□ -0.02
TM7SF3-207ENST00000539399 MIR7-3HGQ8N6C7 128 aa14.92□□□□□ -0.02
TM7SF3-207ENST00000539399 Q8NDZ9 215 aa14.91□□□□□ -0.02
TM7SF3-207ENST00000539399 M0R378 163 aa14.9□□□□□ -0.02
TM7SF3-207ENST00000539399 HIST1H2BKO60814 126 aa14.9□□□□□ -0.02
TM7SF3-207ENST00000539399 HIST1H2BJP06899 126 aa14.9□□□□□ -0.02
TM7SF3-207ENST00000539399 HIST1H2BOP23527 126 aa14.9□□□□□ -0.02
TM7SF3-207ENST00000539399 HIST1H2BBP33778 126 aa14.9□□□□□ -0.02
TM7SF3-207ENST00000539399 HIST1H2BDP58876 126 aa14.9□□□□□ -0.02
TM7SF3-207ENST00000539399 HIST1H2BCP62807 126 aa14.9□□□□□ -0.02
TM7SF3-207ENST00000539399 HIST2H2BEQ16778 126 aa14.9□□□□□ -0.02
TM7SF3-207ENST00000539399 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.9□□□□□ -0.02
TM7SF3-207ENST00000539399 FAM19A1Q7Z5A9 133 aa14.9□□□□□ -0.02
TM7SF3-207ENST00000539399 BOD1L2Q8IYS8 172 aa14.9□□□□□ -0.02
TM7SF3-207ENST00000539399 HIST1H2BHQ93079 126 aa14.9□□□□□ -0.02
TM7SF3-207ENST00000539399 HIST1H2BNQ99877 126 aa14.9□□□□□ -0.02
TM7SF3-207ENST00000539399 HIST1H2BMQ99879 126 aa14.9□□□□□ -0.02
TM7SF3-207ENST00000539399 PMCHL2Q9BQD1 86 aa14.9□□□□□ -0.02
TM7SF3-207ENST00000539399 TMEM238C9JI98 176 aa14.89□□□□□ -0.03
TM7SF3-207ENST00000539399 J3QQQ9 107 aa14.88□□□□□ -0.03
TM7SF3-207ENST00000539399 NMUP48645 174 aa14.88□□□□□ -0.03
TM7SF3-207ENST00000539399 TSPEAR-AS2P59090 65 aa14.88□□□□□ -0.03
TM7SF3-207ENST00000539399 LGALS3P17931 250 aaKnown RBP14.87□□□□□ -0.03
TM7SF3-207ENST00000539399 CRYGAP11844 174 aa14.86□□□□□ -0.03
TM7SF3-207ENST00000539399 PRLHP81277 87 aa14.86□□□□□ -0.03
TM7SF3-207ENST00000539399 IGKV2D-26A0A0A0MRZ7 120 aa14.84□□□□□ -0.03
TM7SF3-207ENST00000539399 NCR3O14931 201 aa14.82□□□□□ -0.04
TM7SF3-207ENST00000539399 PRR4Q16378 134 aa14.82□□□□□ -0.04
TM7SF3-207ENST00000539399 A0A087X002 238 aa14.81□□□□□ -0.04
TM7SF3-207ENST00000539399 SYS1-DBNDD2H3BUS1 97 aa14.81□□□□□ -0.04
TM7SF3-207ENST00000539399 PRYO14603 147 aa14.81□□□□□ -0.04
TM7SF3-207ENST00000539399 S100A1P23297 94 aa14.81□□□□□ -0.04
TM7SF3-207ENST00000539399 FAM229BQ4G0N7 80 aa14.8□□□□□ -0.04
TM7SF3-207ENST00000539399 TYMSOSQ8TAI1 123 aa14.8□□□□□ -0.04
TM7SF3-207ENST00000539399 MIEN1Q9BRT3 115 aa14.8□□□□□ -0.04
TM7SF3-207ENST00000539399 S100A12P80511 92 aa14.79□□□□□ -0.04
TM7SF3-207ENST00000539399 LOC107984156A0A0G2JMH3 177 aa14.77□□□□□ -0.05
TM7SF3-207ENST00000539399 E9PLD3 99 aa14.77□□□□□ -0.05
TM7SF3-207ENST00000539399 ARL17AQ8IVW1 177 aa14.77□□□□□ -0.05
TM7SF3-207ENST00000539399 DAND5Q8N907 189 aa14.77□□□□□ -0.05
TM7SF3-207ENST00000539399 HIGD2AQ9BW72 106 aa14.76□□□□□ -0.05
TM7SF3-207ENST00000539399 PET117Q6UWS5 81 aa14.75□□□□□ -0.05
TM7SF3-207ENST00000539399 ANAPC11Q9NYG5 84 aa14.75□□□□□ -0.05
TM7SF3-207ENST00000539399 TSPAN13O95857 204 aa14.74□□□□□ -0.05
TM7SF3-207ENST00000539399 LINC01545Q5VT33 79 aa14.74□□□□□ -0.05
TM7SF3-207ENST00000539399 KCNQ1DNQ9H478 68 aa14.74□□□□□ -0.05
TM7SF3-207ENST00000539399 LINC00337Q8N6G1 96 aa14.73□□□□□ -0.05
TM7SF3-207ENST00000539399 TRBV10-3A0A0K0K1G6 114 aa14.72□□□□□ -0.05
TM7SF3-207ENST00000539399 TRBV10-2A0A0K0K1G8 114 aa14.72□□□□□ -0.05
TM7SF3-207ENST00000539399 SPANXB1Q9NS25 103 aaPredicted RBP14.72□□□□□ -0.05
TM7SF3-207ENST00000539399 ETDCA0A1B0GVM5 59 aa14.71□□□□□ -0.05
TM7SF3-207ENST00000539399 COA6Q5JTJ3 125 aaKnown RBP14.71□□□□□ -0.05
TM7SF3-207ENST00000539399 A0A0J9YXY3 114 aa14.7□□□□□ -0.06
TM7SF3-207ENST00000539399 SPRR1AP35321 89 aa14.7□□□□□ -0.06
TM7SF3-207ENST00000539399 ZNF706Q9Y5V0 76 aaPredicted RBP14.7□□□□□ -0.06
TM7SF3-207ENST00000539399 NDUFC2O95298 119 aa14.69□□□□□ -0.06
TM7SF3-207ENST00000539399 KRTAP13-2Q52LG2 175 aa14.69□□□□□ -0.06
TM7SF3-207ENST00000539399 DDTP30046 118 aa14.68□□□□□ -0.06
TM7SF3-207ENST00000539399 C3orf79P0CE67 100 aa14.67□□□□□ -0.06
TM7SF3-207ENST00000539399 KRTDAPP60985 99 aa14.65□□□□□ -0.06
TM7SF3-207ENST00000539399 S100A7L2Q5SY68 101 aa14.65□□□□□ -0.06
TM7SF3-207ENST00000539399 C20orf202A1L168 122 aa14.64□□□□□ -0.07
TM7SF3-207ENST00000539399 LINC00304Q8N9R0 145 aa14.64□□□□□ -0.07
TM7SF3-207ENST00000539399 SPRR4Q96PI1 79 aa14.64□□□□□ -0.07
TM7SF3-207ENST00000539399 KRTAP4-16G5E9R7 235 aaPredicted RBP14.63□□□□□ -0.07
TM7SF3-207ENST00000539399 NPC2P61916 151 aa14.63□□□□□ -0.07
TM7SF3-207ENST00000539399 MUC2Q02817 5179 aa14.62□□□□□ -0.07
TM7SF3-207ENST00000539399 ADAMTSL4-AS1Q5T5F5 129 aa14.62□□□□□ -0.07
TM7SF3-207ENST00000539399 ZNF815PA8K554 130 aa14.61□□□□□ -0.07
TM7SF3-207ENST00000539399 TIMM17BO60830 172 aa14.61□□□□□ -0.07
TM7SF3-207ENST00000539399 SOSTDC1Q6X4U4 206 aa14.6□□□□□ -0.07
TM7SF3-207ENST00000539399 IGLV6-57P01721 117 aa14.59□□□□□ -0.07
TM7SF3-207ENST00000539399 SMCR5Q8TEV8 140 aa14.59□□□□□ -0.07
TM7SF3-207ENST00000539399 CBY1Q9Y3M2 126 aa14.59□□□□□ -0.07
TM7SF3-207ENST00000539399 B5MCH6 92 aa14.58□□□□□ -0.08
TM7SF3-207ENST00000539399 AKR1D1P51857 326 aa14.57□□□□□ -0.08
TM7SF3-207ENST00000539399 TRAV23DV6A0A075B6W5 121 aa14.56□□□□□ -0.08
TM7SF3-207ENST00000539399 CTAG1AP78358 180 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms