RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 HECTD4Q9Y4D8 3996 aa12.62□□□□□ -0.39
EFCAB11-202ENST00000538485 KMT2CQ8NEZ4 4911 aaKnown RBP12.62□□□□□ -0.39
EFCAB11-202ENST00000538485 GAGE2EQ4V326 116 aa12.61□□□□□ -0.39
EFCAB11-202ENST00000538485 GAGE2DQ9UEU5 116 aa12.61□□□□□ -0.39
EFCAB11-202ENST00000538485 Q8NDZ9 215 aa12.61□□□□□ -0.39
EFCAB11-202ENST00000538485 PRO1854Q9UHT4 67 aa12.6□□□□□ -0.39
EFCAB11-202ENST00000538485 IGKV2-28A0A075B6P5 120 aa12.59□□□□□ -0.39
EFCAB11-202ENST00000538485 LCE6AA0A183 80 aa12.59□□□□□ -0.39
EFCAB11-202ENST00000538485 IGKV2D-28P01615 120 aa12.59□□□□□ -0.39
EFCAB11-202ENST00000538485 RPL18AQ02543 176 aaKnown RBP12.59□□□□□ -0.39
EFCAB11-202ENST00000538485 FAT2Q9NYQ8 4349 aa12.58□□□□□ -0.4
EFCAB11-202ENST00000538485 RTL8CO15255 209 aa12.58□□□□□ -0.4
EFCAB11-202ENST00000538485 PRR3P79522 188 aaKnown RBP12.57□□□□□ -0.4
EFCAB11-202ENST00000538485 NAA38Q9BRA0 125 aaKnown RBP12.57□□□□□ -0.4
EFCAB11-202ENST00000538485 C9orf129Q5T035 196 aaKnown RBP12.57□□□□□ -0.4
EFCAB11-202ENST00000538485 PGPEP1Q9NXJ5 209 aa12.57□□□□□ -0.4
EFCAB11-202ENST00000538485 NDUFC2O95298 119 aa12.56□□□□□ -0.4
EFCAB11-202ENST00000538485 TNP2Q05952 138 aa12.56□□□□□ -0.4
EFCAB11-202ENST00000538485 LINC00337Q8N6G1 96 aa12.56□□□□□ -0.4
EFCAB11-202ENST00000538485 LOC107984640A0A0U1RRK4 108 aa12.55□□□□□ -0.4
EFCAB11-202ENST00000538485 C9orf163Q8N9P6 203 aa12.55□□□□□ -0.4
EFCAB11-202ENST00000538485 C9orf118A6NHY6 69 aa12.55□□□□□ -0.4
EFCAB11-202ENST00000538485 H3BUT2 72 aa12.54□□□□□ -0.4
EFCAB11-202ENST00000538485 H7C2G1 150 aa12.54□□□□□ -0.4
EFCAB11-202ENST00000538485 TSPAN13O95857 204 aa12.54□□□□□ -0.4
EFCAB11-202ENST00000538485 GAGE2BQ13066 116 aa12.54□□□□□ -0.4
EFCAB11-202ENST00000538485 LINC01620Q4KN68 170 aa12.54□□□□□ -0.4
EFCAB11-202ENST00000538485 DNAH11Q96DT5 4516 aa12.54□□□□□ -0.4
EFCAB11-202ENST00000538485 A0A1B0GV90 55 aa12.53□□□□□ -0.4
EFCAB11-202ENST00000538485 FUSP35637 526 aaKnown RBP eCLIP12.53□□□□□ -0.4
EFCAB11-202ENST00000538485 RPL13AP40429 203 aaKnown RBP12.53□□□□□ -0.4
EFCAB11-202ENST00000538485 TRAV13-2A0A0B4J235 113 aa12.51□□□□□ -0.41
EFCAB11-202ENST00000538485 NCR3O14931 201 aa12.51□□□□□ -0.41
EFCAB11-202ENST00000538485 RYR2Q92736 4967 aa12.51□□□□□ -0.41
EFCAB11-202ENST00000538485 A0A096LNI7 61 aa12.5□□□□□ -0.41
EFCAB11-202ENST00000538485 VPREB1P12018 145 aa12.5□□□□□ -0.41
EFCAB11-202ENST00000538485 C16orf90A8MZG2 172 aa12.49□□□□□ -0.41
EFCAB11-202ENST00000538485 Q1RN00 199 aa12.48□□□□□ -0.41
EFCAB11-202ENST00000538485 SDIM1Q6ZPB5 146 aa12.48□□□□□ -0.41
EFCAB11-202ENST00000538485 OR13C6PQ8NH95 151 aa12.48□□□□□ -0.41
EFCAB11-202ENST00000538485 PKD1P98161 4303 aa12.47□□□□□ -0.41
EFCAB11-202ENST00000538485 IGKV2-24A0A0C4DH68 120 aa12.47□□□□□ -0.41
EFCAB11-202ENST00000538485 FAM168BA1KXE4 195 aa12.47□□□□□ -0.41
EFCAB11-202ENST00000538485 SERTAD4-AS1Q5TG53 156 aa12.47□□□□□ -0.41
EFCAB11-202ENST00000538485 A0A1W2PPM0 123 aa12.46□□□□□ -0.41
EFCAB11-202ENST00000538485 DNAH5Q8TE73 4624 aa12.46□□□□□ -0.42
EFCAB11-202ENST00000538485 TRBV10-2A0A0K0K1G8 114 aa12.45□□□□□ -0.42
EFCAB11-202ENST00000538485 KRTAP7-1Q8IUC3 87 aa12.45□□□□□ -0.42
EFCAB11-202ENST00000538485 CHTF8P0CG12 524 aa12.44□□□□□ -0.42
EFCAB11-202ENST00000538485 PLA2G2DQ9UNK4 145 aa12.44□□□□□ -0.42
EFCAB11-202ENST00000538485 TMEM126AQ9H061 195 aa12.44□□□□□ -0.42
EFCAB11-202ENST00000538485 IGLV5-52A0A0A0MRZ9 124 aa12.43□□□□□ -0.42
EFCAB11-202ENST00000538485 PSMB2P49721 201 aa12.43□□□□□ -0.42
EFCAB11-202ENST00000538485 TRIAP1O43715 76 aa12.42□□□□□ -0.42
EFCAB11-202ENST00000538485 S100A7L2Q5SY68 101 aa12.42□□□□□ -0.42
EFCAB11-202ENST00000538485 KRTAP10-2P60368 255 aa12.42□□□□□ -0.42
EFCAB11-202ENST00000538485 SMIM11BQ8TCY0 68 aa12.42□□□□□ -0.42
EFCAB11-202ENST00000538485 IGLV6-57P01721 117 aa12.41□□□□□ -0.42
EFCAB11-202ENST00000538485 FABP2P12104 132 aa12.41□□□□□ -0.42
EFCAB11-202ENST00000538485 VAMP3Q15836 100 aa12.41□□□□□ -0.42
EFCAB11-202ENST00000538485 PKIGQ9Y2B9 76 aa12.41□□□□□ -0.42
EFCAB11-202ENST00000538485 M0R378 163 aa12.4□□□□□ -0.42
EFCAB11-202ENST00000538485 FAM19A5Q7Z5A7 132 aaPredicted RBP12.4□□□□□ -0.42
EFCAB11-202ENST00000538485 NKAPP1Q8N9T2 125 aa12.4□□□□□ -0.42
EFCAB11-202ENST00000538485 TRBV10-3A0A0K0K1G6 114 aa12.4□□□□□ -0.42
EFCAB11-202ENST00000538485 PANO1I0J062 215 aa12.4□□□□□ -0.42
EFCAB11-202ENST00000538485 RPL28P46779 137 aaKnown RBP12.4□□□□□ -0.42
EFCAB11-202ENST00000538485 A0A1W2PNN7 141 aa12.39□□□□□ -0.43
EFCAB11-202ENST00000538485 IGLV5-37A0A075B6J1 123 aa12.38□□□□□ -0.43
EFCAB11-202ENST00000538485 SCGB1C2P0DMR2 95 aa12.38□□□□□ -0.43
EFCAB11-202ENST00000538485 C22orf24Q9Y442 160 aa12.38□□□□□ -0.43
EFCAB11-202ENST00000538485 GAGE10A6NGK3 116 aa12.37□□□□□ -0.43
EFCAB11-202ENST00000538485 C7orf33Q8WU49 177 aa12.37□□□□□ -0.43
EFCAB11-202ENST00000538485 LINC00474Q9P2X8 69 aa12.37□□□□□ -0.43
EFCAB11-202ENST00000538485 SPCS1Q9Y6A9 102 aa12.37□□□□□ -0.43
EFCAB11-202ENST00000538485 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.37□□□□□ -0.43
EFCAB11-202ENST00000538485 PKHD1P08F94 4074 aa12.35□□□□□ -0.43
EFCAB11-202ENST00000538485 COX6CP09669 75 aa12.35□□□□□ -0.43
EFCAB11-202ENST00000538485 RYR3Q15413 4870 aa12.34□□□□□ -0.43
EFCAB11-202ENST00000538485 MRPL55Q7Z7F7 128 aaKnown RBP12.34□□□□□ -0.43
EFCAB11-202ENST00000538485 SPACA4Q8TDM5 124 aa12.34□□□□□ -0.43
EFCAB11-202ENST00000538485 K7EP34 96 aa12.33□□□□□ -0.44
EFCAB11-202ENST00000538485 LYRM7Q5U5X0 104 aa12.33□□□□□ -0.44
EFCAB11-202ENST00000538485 LINC00167Q96N53 147 aa12.33□□□□□ -0.44
EFCAB11-202ENST00000538485 TRAV23DV6A0A075B6W5 121 aa12.32□□□□□ -0.44
EFCAB11-202ENST00000538485 M0QXV9 152 aa12.32□□□□□ -0.44
EFCAB11-202ENST00000538485 TCL1BO95988 128 aa12.32□□□□□ -0.44
EFCAB11-202ENST00000538485 LINC00336Q6ZUF6 198 aa12.32□□□□□ -0.44
EFCAB11-202ENST00000538485 DNAH8Q96JB1 4490 aa12.32□□□□□ -0.44
EFCAB11-202ENST00000538485 RPL37AP8A6NKH3 93 aa12.31□□□□□ -0.44
EFCAB11-202ENST00000538485 C6orf99Q4VX62 202 aa12.31□□□□□ -0.44
EFCAB11-202ENST00000538485 DPH3Q96FX2 82 aa12.31□□□□□ -0.44
EFCAB11-202ENST00000538485 CLEC2BQ92478 149 aa12.31□□□□□ -0.44
EFCAB11-202ENST00000538485 IGLV1-50A0A075B6I6 118 aa12.29□□□□□ -0.44
EFCAB11-202ENST00000538485 TRBV20-1A0A075B6N2 111 aa12.29□□□□□ -0.44
EFCAB11-202ENST00000538485 H3BMG7 143 aa12.29□□□□□ -0.44
EFCAB11-202ENST00000538485 GTF2H5Q6ZYL4 71 aa12.29□□□□□ -0.44
EFCAB11-202ENST00000538485 KCNQ1DNQ9H478 68 aa12.29□□□□□ -0.44
EFCAB11-202ENST00000538485 ZNF73O43830 326 aaPredicted RBP12.28□□□□□ -0.44
EFCAB11-202ENST00000538485 UBE2V1Q13404 147 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms