RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 C9orf163Q8N9P6 203 aa13.28□□□□□ -0.28
COPS7A-208ENST00000538410 SNHG12Q9BXW3 62 aa13.28□□□□□ -0.28
COPS7A-208ENST00000538410 LOC107984640A0A0U1RRK4 108 aa13.26□□□□□ -0.29
COPS7A-208ENST00000538410 A4D1N5 150 aa13.26□□□□□ -0.29
COPS7A-208ENST00000538410 RPL18AQ02543 176 aaKnown RBP13.26□□□□□ -0.29
COPS7A-208ENST00000538410 DYNC1H1Q14204 4646 aaKnown RBP13.25□□□□□ -0.29
COPS7A-208ENST00000538410 TMEM238LA0A1B0GVL6 79 aa13.25□□□□□ -0.29
COPS7A-208ENST00000538410 A6NJY4 79 aa13.25□□□□□ -0.29
COPS7A-208ENST00000538410 DNAH11Q96DT5 4516 aa13.24□□□□□ -0.29
COPS7A-208ENST00000538410 GAGE2EQ4V326 116 aa13.24□□□□□ -0.29
COPS7A-208ENST00000538410 GAGE2DQ9UEU5 116 aa13.24□□□□□ -0.29
COPS7A-208ENST00000538410 XAGE1AQ9HD64 81 aa13.24□□□□□ -0.29
COPS7A-208ENST00000538410 C16orf90A8MZG2 172 aa13.23□□□□□ -0.29
COPS7A-208ENST00000538410 NHP2Q9NX24 153 aaKnown RBP13.21□□□□□ -0.29
COPS7A-208ENST00000538410 A6NDN8 102 aa13.21□□□□□ -0.3
COPS7A-208ENST00000538410 GAGE2BQ13066 116 aa13.21□□□□□ -0.3
COPS7A-208ENST00000538410 PKIGQ9Y2B9 76 aa13.21□□□□□ -0.3
COPS7A-208ENST00000538410 C9orf129Q5T035 196 aaKnown RBP13.2□□□□□ -0.3
COPS7A-208ENST00000538410 CFC1BP0CG36 223 aa13.19□□□□□ -0.3
COPS7A-208ENST00000538410 CFC1P0CG37 223 aa13.19□□□□□ -0.3
COPS7A-208ENST00000538410 FUSP35637 526 aaKnown RBP eCLIP13.19□□□□□ -0.3
COPS7A-208ENST00000538410 LINC01620Q4KN68 170 aa13.19□□□□□ -0.3
COPS7A-208ENST00000538410 IGLV5-52A0A0A0MRZ9 124 aa13.18□□□□□ -0.3
COPS7A-208ENST00000538410 A0A1B0GWB2 263 aa13.18□□□□□ -0.3
COPS7A-208ENST00000538410 NDUFC2O95298 119 aa13.18□□□□□ -0.3
COPS7A-208ENST00000538410 A0A096LNI7 61 aa13.17□□□□□ -0.3
COPS7A-208ENST00000538410 SDIM1Q6ZPB5 146 aa13.17□□□□□ -0.3
COPS7A-208ENST00000538410 Q8NDZ9 215 aa13.17□□□□□ -0.3
COPS7A-208ENST00000538410 K7ERJ3 54 aa13.16□□□□□ -0.3
COPS7A-208ENST00000538410 A0A0B4J2C4 111 aa13.15□□□□□ -0.3
COPS7A-208ENST00000538410 IGKV2-28A0A075B6P5 120 aa13.14□□□□□ -0.31
COPS7A-208ENST00000538410 IGKV2D-28P01615 120 aa13.14□□□□□ -0.31
COPS7A-208ENST00000538410 KRTAP10-2P60368 255 aa13.14□□□□□ -0.31
COPS7A-208ENST00000538410 IGKV2-24A0A0C4DH68 120 aa13.13□□□□□ -0.31
COPS7A-208ENST00000538410 PRR3P79522 188 aaKnown RBP13.13□□□□□ -0.31
COPS7A-208ENST00000538410 RAB37Q96AX2 223 aa13.13□□□□□ -0.31
COPS7A-208ENST00000538410 PLA2G2DQ9UNK4 145 aa13.13□□□□□ -0.31
COPS7A-208ENST00000538410 COL5A1-AS1Q5SY13 56 aa13.13□□□□□ -0.31
COPS7A-208ENST00000538410 PGPEP1Q9NXJ5 209 aa13.13□□□□□ -0.31
COPS7A-208ENST00000538410 VPREB1P12018 145 aa13.12□□□□□ -0.31
COPS7A-208ENST00000538410 LINC00337Q8N6G1 96 aa13.11□□□□□ -0.31
COPS7A-208ENST00000538410 PRO1854Q9UHT4 67 aa13.11□□□□□ -0.31
COPS7A-208ENST00000538410 CDK2AP2O75956 126 aa13.1□□□□□ -0.31
COPS7A-208ENST00000538410 CHTF8P0CG12 524 aa13.1□□□□□ -0.31
COPS7A-208ENST00000538410 FAM168BA1KXE4 195 aa13.1□□□□□ -0.31
COPS7A-208ENST00000538410 NCR3O14931 201 aa13.1□□□□□ -0.31
COPS7A-208ENST00000538410 SERTAD4-AS1Q5TG53 156 aa13.1□□□□□ -0.31
COPS7A-208ENST00000538410 KRTAP17-1Q9BYP8 105 aa13.1□□□□□ -0.31
COPS7A-208ENST00000538410 RYR1P21817 5038 aa13.09□□□□□ -0.31
COPS7A-208ENST00000538410 DNAH5Q8TE73 4624 aa13.09□□□□□ -0.31
COPS7A-208ENST00000538410 TRAV13-2A0A0B4J235 113 aa13.09□□□□□ -0.31
COPS7A-208ENST00000538410 TRBV10-2A0A0K0K1G8 114 aa13.09□□□□□ -0.31
COPS7A-208ENST00000538410 LBHQ53QV2 105 aaPredicted RBP13.09□□□□□ -0.31
COPS7A-208ENST00000538410 LINC00474Q9P2X8 69 aa13.09□□□□□ -0.31
COPS7A-208ENST00000538410 TAX1BP3O14907 124 aa13.07□□□□□ -0.32
COPS7A-208ENST00000538410 IGLV5-37A0A075B6J1 123 aa13.06□□□□□ -0.32
COPS7A-208ENST00000538410 RPL13AP40429 203 aaKnown RBP13.06□□□□□ -0.32
COPS7A-208ENST00000538410 KRTAP7-1Q8IUC3 87 aa13.06□□□□□ -0.32
COPS7A-208ENST00000538410 PANO1I0J062 215 aa13.06□□□□□ -0.32
COPS7A-208ENST00000538410 LRP1BQ9NZR2 4599 aa13.05□□□□□ -0.32
COPS7A-208ENST00000538410 M0R378 163 aa13.05□□□□□ -0.32
COPS7A-208ENST00000538410 FAM19A5Q7Z5A7 132 aaPredicted RBP13.05□□□□□ -0.32
COPS7A-208ENST00000538410 NKAPP1Q8N9T2 125 aa13.05□□□□□ -0.32
COPS7A-208ENST00000538410 OR13C6PQ8NH95 151 aa13.05□□□□□ -0.32
COPS7A-208ENST00000538410 SPACA4Q8TDM5 124 aa13.05□□□□□ -0.32
COPS7A-208ENST00000538410 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.05□□□□□ -0.32
COPS7A-208ENST00000538410 A0A1W2PNN7 141 aa13.04□□□□□ -0.32
COPS7A-208ENST00000538410 H7C2G1 150 aa13.02□□□□□ -0.32
COPS7A-208ENST00000538410 TSPAN13O95857 204 aa13.02□□□□□ -0.32
COPS7A-208ENST00000538410 S100A7L2Q5SY68 101 aa13.02□□□□□ -0.32
COPS7A-208ENST00000538410 TMEM126AQ9H061 195 aa13.02□□□□□ -0.32
COPS7A-208ENST00000538410 PCLOQ9Y6V0 5065 aa13.02□□□□□ -0.32
COPS7A-208ENST00000538410 C22orf24Q9Y442 160 aa13.02□□□□□ -0.33
COPS7A-208ENST00000538410 IGLV6-57P01721 117 aa13.01□□□□□ -0.33
COPS7A-208ENST00000538410 Q1RN00 199 aa13□□□□□ -0.33
COPS7A-208ENST00000538410 C7orf33Q8WU49 177 aa13□□□□□ -0.33
COPS7A-208ENST00000538410 DPH3Q96FX2 82 aa13□□□□□ -0.33
COPS7A-208ENST00000538410 DNAH8Q96JB1 4490 aa13□□□□□ -0.33
COPS7A-208ENST00000538410 C9orf118A6NHY6 69 aa12.99□□□□□ -0.33
COPS7A-208ENST00000538410 HSPG2P98160 4391 aa12.99□□□□□ -0.33
COPS7A-208ENST00000538410 TRBV10-3A0A0K0K1G6 114 aa12.99□□□□□ -0.33
COPS7A-208ENST00000538410 NAA38Q9BRA0 125 aaKnown RBP12.99□□□□□ -0.33
COPS7A-208ENST00000538410 M0QXV9 152 aa12.98□□□□□ -0.33
COPS7A-208ENST00000538410 KRTAP10-1P60331 282 aa12.98□□□□□ -0.33
COPS7A-208ENST00000538410 MRPL55Q7Z7F7 128 aaKnown RBP12.98□□□□□ -0.33
COPS7A-208ENST00000538410 KRTAP4-5Q9BYR2 181 aa12.98□□□□□ -0.33
COPS7A-208ENST00000538410 GAGE10A6NGK3 116 aa12.97□□□□□ -0.33
COPS7A-208ENST00000538410 H3BUT2 72 aa12.97□□□□□ -0.33
COPS7A-208ENST00000538410 LINC00167Q96N53 147 aa12.97□□□□□ -0.33
COPS7A-208ENST00000538410 SMIM11BQ8TCY0 68 aa12.96□□□□□ -0.33
COPS7A-208ENST00000538410 A0A087WYN8 130 aa12.95□□□□□ -0.34
COPS7A-208ENST00000538410 EPM2AB3EWF7 344 aa12.95□□□□□ -0.34
COPS7A-208ENST00000538410 APOBP04114 4563 aaKnown RBP12.95□□□□□ -0.34
COPS7A-208ENST00000538410 RPL28P46779 137 aaKnown RBP12.95□□□□□ -0.34
COPS7A-208ENST00000538410 Q8N1X5 172 aa12.94□□□□□ -0.34
COPS7A-208ENST00000538410 PLAC8Q9NZF1 115 aa12.94□□□□□ -0.34
COPS7A-208ENST00000538410 PSMB2P49721 201 aa12.93□□□□□ -0.34
COPS7A-208ENST00000538410 Q6ZSA8 131 aa12.93□□□□□ -0.34
COPS7A-208ENST00000538410 FAM30AQ9NZY2 134 aa12.93□□□□□ -0.34
COPS7A-208ENST00000538410 IGLV1-50A0A075B6I6 118 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms