RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 KIAA0087Q14695 138 aa12.2□□□□□ -0.46
TRA2A-211ENST00000538367 C18orf65Q6ZTR6 163 aa12.2□□□□□ -0.46
TRA2A-211ENST00000538367 M0R2N4 97 aa12.19□□□□□ -0.46
TRA2A-211ENST00000538367 Q6YL49 198 aa12.19□□□□□ -0.46
TRA2A-211ENST00000538367 CSPG4Q6UVK1 2322 aa12.19□□□□□ -0.46
TRA2A-211ENST00000538367 CCDC168Q8NDH2 2452 aa12.19□□□□□ -0.46
TRA2A-211ENST00000538367 ZANQ9Y493 2812 aa12.18□□□□□ -0.46
TRA2A-211ENST00000538367 BPY2O14599 106 aa12.17□□□□□ -0.46
TRA2A-211ENST00000538367 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.17□□□□□ -0.46
TRA2A-211ENST00000538367 ZFHX3Q15911 3703 aa12.17□□□□□ -0.46
TRA2A-211ENST00000538367 IGLV6-57P01721 117 aa12.17□□□□□ -0.46
TRA2A-211ENST00000538367 SPATA3Q8NHX4 192 aa12.17□□□□□ -0.46
TRA2A-211ENST00000538367 PRYO14603 147 aa12.16□□□□□ -0.46
TRA2A-211ENST00000538367 ESRGQ1W209 222 aa12.16□□□□□ -0.46
TRA2A-211ENST00000538367 CD164L2Q6UWJ8 174 aa12.16□□□□□ -0.46
TRA2A-211ENST00000538367 ZNF469Q96JG9 3925 aaPredicted RBP12.16□□□□□ -0.46
TRA2A-211ENST00000538367 CCL24O00175 119 aa12.16□□□□□ -0.46
TRA2A-211ENST00000538367 A0A0U1RQV1 116 aa12.15□□□□□ -0.46
TRA2A-211ENST00000538367 TEX15Q9BXT5 2789 aa12.15□□□□□ -0.46
TRA2A-211ENST00000538367 Q6ZQY7 126 aa12.14□□□□□ -0.47
TRA2A-211ENST00000538367 FLNAP21333 2647 aaKnown RBP12.14□□□□□ -0.47
TRA2A-211ENST00000538367 SEC61GP60059 68 aa12.13□□□□□ -0.47
TRA2A-211ENST00000538367 KRTAP1-1Q07627 177 aa12.13□□□□□ -0.47
TRA2A-211ENST00000538367 AKAP9Q99996 3911 aa12.13□□□□□ -0.47
TRA2A-211ENST00000538367 GIG44P09565 113 aaPredicted RBP12.12□□□□□ -0.47
TRA2A-211ENST00000538367 FUSP35637 526 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRA2A-211ENST00000538367 OCR1Q9BZK8 76 aa12.11□□□□□ -0.47
TRA2A-211ENST00000538367 COX7BP24311 80 aa12.1□□□□□ -0.47
TRA2A-211ENST00000538367 KHDC1LQ5JSQ8 128 aa12.1□□□□□ -0.47
TRA2A-211ENST00000538367 Q8NDZ9 215 aa12.1□□□□□ -0.47
TRA2A-211ENST00000538367 DIRC1Q969H9 104 aa12.09□□□□□ -0.47
TRA2A-211ENST00000538367 FAM229BQ4G0N7 80 aa12.08□□□□□ -0.47
TRA2A-211ENST00000538367 MYO9AB2RTY4 2548 aa12.07□□□□□ -0.48
TRA2A-211ENST00000538367 Q6ZTC4 211 aa12.07□□□□□ -0.48
TRA2A-211ENST00000538367 A0A0J9YWU9 116 aa12.07□□□□□ -0.48
TRA2A-211ENST00000538367 IGHV4-30-4P0DP06 118 aa12.07□□□□□ -0.48
TRA2A-211ENST00000538367 PRR15Q8IV56 129 aa12.07□□□□□ -0.48
TRA2A-211ENST00000538367 CSNK1G2-AS1Q8NCQ2 148 aa12.07□□□□□ -0.48
TRA2A-211ENST00000538367 IGKV4-1P06312 121 aa12.06□□□□□ -0.48
TRA2A-211ENST00000538367 LINC00612Q8N6U2 182 aa12.06□□□□□ -0.48
TRA2A-211ENST00000538367 TLN2Q9Y4G6 2542 aa12.05□□□□□ -0.48
TRA2A-211ENST00000538367 CHCHD10Q8WYQ3 142 aaPredicted RBP12.05□□□□□ -0.48
TRA2A-211ENST00000538367 SCXQ7RTU7 201 aa12.04□□□□□ -0.48
TRA2A-211ENST00000538367 MPLKIPQ8TAP9 179 aa12.04□□□□□ -0.48
TRA2A-211ENST00000538367 GVQW2A0A096LPI5 108 aaPredicted RBP12.03□□□□□ -0.48
TRA2A-211ENST00000538367 ACANP16112 2415 aa12.03□□□□□ -0.48
TRA2A-211ENST00000538367 GYPEP15421 78 aa12.02□□□□□ -0.48
TRA2A-211ENST00000538367 ELOF1P60002 83 aaKnown RBP12.02□□□□□ -0.48
TRA2A-211ENST00000538367 LINC00269Q8N2A0 174 aa12.02□□□□□ -0.48
TRA2A-211ENST00000538367 ESM1Q9NQ30 184 aa12.02□□□□□ -0.48
TRA2A-211ENST00000538367 C9orf116Q5BN46 136 aaPredicted RBP12.02□□□□□ -0.49
TRA2A-211ENST00000538367 SMR3AQ99954 134 aa12.02□□□□□ -0.49
TRA2A-211ENST00000538367 CELA1Q9UNI1 258 aa12.02□□□□□ -0.49
TRA2A-211ENST00000538367 MXRA5Q9NR99 2828 aa12.02□□□□□ -0.49
TRA2A-211ENST00000538367 LCE6AA0A183 80 aa12.01□□□□□ -0.49
TRA2A-211ENST00000538367 NOTCH2Q04721 2471 aa12□□□□□ -0.49
TRA2A-211ENST00000538367 Q1T7F1 81 aa12□□□□□ -0.49
TRA2A-211ENST00000538367 CLPSL2Q6UWE3 100 aa12□□□□□ -0.49
TRA2A-211ENST00000538367 SONP18583 2426 aaKnown RBP12□□□□□ -0.49
TRA2A-211ENST00000538367 Q6ZRU5 148 aa11.99□□□□□ -0.49
TRA2A-211ENST00000538367 A0A1B0GW54 56 aa11.99□□□□□ -0.49
TRA2A-211ENST00000538367 hDV103S1A0JD37 113 aa11.99□□□□□ -0.49
TRA2A-211ENST00000538367 ZNF73O43830 326 aaPredicted RBP11.99□□□□□ -0.49
TRA2A-211ENST00000538367 SPAG11BQ08648 103 aa11.98□□□□□ -0.49
TRA2A-211ENST00000538367 PRO0255Q9UI72 69 aa11.98□□□□□ -0.49
TRA2A-211ENST00000538367 OTOGQ6ZRI0 2925 aa11.97□□□□□ -0.49
TRA2A-211ENST00000538367 DNAJC9-AS1A6NH13 148 aa11.97□□□□□ -0.49
TRA2A-211ENST00000538367 REG3AQ06141 175 aa11.97□□□□□ -0.49
TRA2A-211ENST00000538367 LINC01006Q8NI28 216 aa11.96□□□□□ -0.49
TRA2A-211ENST00000538367 C19orf73Q9NVV2 129 aa11.96□□□□□ -0.5
TRA2A-211ENST00000538367 UNQ6190/PRO20217Q6UXQ8 127 aa11.94□□□□□ -0.5
TRA2A-211ENST00000538367 ANK3Q12955 4377 aaKnown RBP11.93□□□□□ -0.5
TRA2A-211ENST00000538367 C10orf25Q5T742 122 aa11.93□□□□□ -0.5
TRA2A-211ENST00000538367 HIGD2AQ9BW72 106 aa11.92□□□□□ -0.5
TRA2A-211ENST00000538367 HIVEP2P31629 2446 aa11.92□□□□□ -0.5
TRA2A-211ENST00000538367 CYSRT1A8MQ03 144 aa11.92□□□□□ -0.5
TRA2A-211ENST00000538367 ANGP03950 147 aaKnown RBP11.92□□□□□ -0.5
TRA2A-211ENST00000538367 PMAIP1Q13794 54 aa11.92□□□□□ -0.5
TRA2A-211ENST00000538367 HIGD2BQ4VC39 106 aa11.91□□□□□ -0.5
TRA2A-211ENST00000538367 DEFB130BP0DP73 79 aa11.9□□□□□ -0.5
TRA2A-211ENST00000538367 DEFB130AP0DP74 79 aa11.9□□□□□ -0.5
TRA2A-211ENST00000538367 LINC00528Q8N1L1 170 aa11.89□□□□□ -0.51
TRA2A-211ENST00000538367 INAFM1C9JVW0 142 aa11.89□□□□□ -0.51
TRA2A-211ENST00000538367 IGLV1-51P01701 117 aa11.89□□□□□ -0.51
TRA2A-211ENST00000538367 IGLV10-54A0A075B6I4 117 aa11.88□□□□□ -0.51
TRA2A-211ENST00000538367 Q8N9L7 120 aa11.88□□□□□ -0.51
TRA2A-211ENST00000538367 C2CD3Q4AC94 2353 aa11.88□□□□□ -0.51
TRA2A-211ENST00000538367 BAHCC1Q9P281 2608 aa11.88□□□□□ -0.51
TRA2A-211ENST00000538367 ZCCHC13Q8WW36 166 aaKnown RBP11.87□□□□□ -0.51
TRA2A-211ENST00000538367 CYP4F30PQ9H0H9 118 aa11.87□□□□□ -0.51
TRA2A-211ENST00000538367 FLNBO75369 2602 aaKnown RBP11.87□□□□□ -0.51
TRA2A-211ENST00000538367 M0R378 163 aa11.86□□□□□ -0.51
TRA2A-211ENST00000538367 WFDC10AQ9H1F0 79 aa11.86□□□□□ -0.51
TRA2A-211ENST00000538367 MTORP42345 2549 aa11.86□□□□□ -0.51
TRA2A-211ENST00000538367 Q6ZRP5 223 aa11.86□□□□□ -0.51
TRA2A-211ENST00000538367 VPREB1P12018 145 aa11.84□□□□□ -0.51
TRA2A-211ENST00000538367 C6orf48Q9UBA6 75 aa11.84□□□□□ -0.51
TRA2A-211ENST00000538367 HIVEP1P15822 2718 aa11.84□□□□□ -0.51
TRA2A-211ENST00000538367 LYRM9A8MSI8 78 aa11.83□□□□□ -0.52
TRA2A-211ENST00000538367 C1orf64Q8NEQ6 169 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms