RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 HIST3H2BBQ8N257 126 aa8.02□□□□□ -1.13
DDB1-207ENST00000535967 STPG4Q8N801 248 aa8.02□□□□□ -1.13
DDB1-207ENST00000535967 DPH3Q96FX2 82 aa8.02□□□□□ -1.13
DDB1-207ENST00000535967 PMCHL2Q9BQD1 86 aa8.02□□□□□ -1.13
DDB1-207ENST00000535967 KRTAP29-1A8MX34 341 aaPredicted RBP8.01□□□□□ -1.13
DDB1-207ENST00000535967 S100A2P29034 98 aa8.01□□□□□ -1.13
DDB1-207ENST00000535967 C9orf116Q5BN46 136 aaPredicted RBP8.01□□□□□ -1.13
DDB1-207ENST00000535967 C20orf202A1L168 122 aa8□□□□□ -1.13
DDB1-207ENST00000535967 AKR1D1P51857 326 aa8□□□□□ -1.13
DDB1-207ENST00000535967 KRTDAPP60985 99 aa8□□□□□ -1.13
DDB1-207ENST00000535967 ZNF625Q96I27 306 aaPredicted RBP8□□□□□ -1.13
DDB1-207ENST00000535967 LEPROTO15243 131 aa7.99□□□□□ -1.13
DDB1-207ENST00000535967 PLEKHB2Q96CS7 222 aa7.99□□□□□ -1.13
DDB1-207ENST00000535967 COX17Q14061 63 aa7.98□□□□□ -1.13
DDB1-207ENST00000535967 GAGE2EQ4V326 116 aa7.98□□□□□ -1.13
DDB1-207ENST00000535967 HIST1H2BLQ99880 126 aa7.98□□□□□ -1.13
DDB1-207ENST00000535967 GAGE2DQ9UEU5 116 aa7.98□□□□□ -1.13
DDB1-207ENST00000535967 FAT3Q8TDW7 4589 aa7.98□□□□□ -1.13
DDB1-207ENST00000535967 HERV-K104P63124 156 aa7.97□□□□□ -1.13
DDB1-207ENST00000535967 ERG28Q9UKR5 140 aa7.97□□□□□ -1.13
DDB1-207ENST00000535967 E9PLD3 99 aa7.96□□□□□ -1.13
DDB1-207ENST00000535967 SNRPEP62304 92 aaKnown RBP7.96□□□□□ -1.13
DDB1-207ENST00000535967 C7orf33Q8WU49 177 aa7.96□□□□□ -1.13
DDB1-207ENST00000535967 KRTAP4-9Q9BYQ8 210 aa7.96□□□□□ -1.13
DDB1-207ENST00000535967 MYMXA0A1B0GTQ4 84 aa7.95□□□□□ -1.14
DDB1-207ENST00000535967 C5orf52A6NGY3 159 aa7.95□□□□□ -1.14
DDB1-207ENST00000535967 KRTAP9-7A8MTY7 169 aa7.95□□□□□ -1.14
DDB1-207ENST00000535967 J3QQQ9 107 aa7.95□□□□□ -1.14
DDB1-207ENST00000535967 NMUP48645 174 aa7.95□□□□□ -1.14
DDB1-207ENST00000535967 KRTAP10-4P60372 401 aaPredicted RBP7.95□□□□□ -1.14
DDB1-207ENST00000535967 C9orf129Q5T035 196 aaKnown RBP7.95□□□□□ -1.14
DDB1-207ENST00000535967 NDUFA12Q9UI09 145 aa7.95□□□□□ -1.14
DDB1-207ENST00000535967 A0A1W2PNN7 141 aa7.95□□□□□ -1.14
DDB1-207ENST00000535967 LGALS3P17931 250 aaKnown RBP7.95□□□□□ -1.14
DDB1-207ENST00000535967 TSPEAR-AS2P59090 65 aa7.95□□□□□ -1.14
DDB1-207ENST00000535967 LINC00587B1AMM8 73 aa7.94□□□□□ -1.14
DDB1-207ENST00000535967 PFN2P35080 140 aa7.94□□□□□ -1.14
DDB1-207ENST00000535967 RPL37AP61513 92 aaKnown RBP7.94□□□□□ -1.14
DDB1-207ENST00000535967 FAM19A5Q7Z5A7 132 aaPredicted RBP7.93□□□□□ -1.14
DDB1-207ENST00000535967 XAGE1AQ9HD64 81 aa7.93□□□□□ -1.14
DDB1-207ENST00000535967 PKHD1L1Q86WI1 4243 aa7.92□□□□□ -1.14
DDB1-207ENST00000535967 FAM168BA1KXE4 195 aa7.92□□□□□ -1.14
DDB1-207ENST00000535967 MEIG1Q5JSS6 88 aa7.92□□□□□ -1.14
DDB1-207ENST00000535967 SERTAD4-AS1Q5TG53 156 aa7.92□□□□□ -1.14
DDB1-207ENST00000535967 M0QXV9 152 aa7.91□□□□□ -1.14
DDB1-207ENST00000535967 LINC00158P58513 81 aa7.9□□□□□ -1.14
DDB1-207ENST00000535967 SND1-IT1Q9HBX3 110 aa7.9□□□□□ -1.14
DDB1-207ENST00000535967 TP73-AS1Q9UF72 201 aa7.9□□□□□ -1.14
DDB1-207ENST00000535967 KRTAP7-1Q8IUC3 87 aa7.89□□□□□ -1.15
DDB1-207ENST00000535967 IGLV5-37A0A075B6J1 123 aa7.88□□□□□ -1.15
DDB1-207ENST00000535967 SMIM13P0DJ93 91 aa7.88□□□□□ -1.15
DDB1-207ENST00000535967 PHF5AQ7RTV0 110 aaKnown RBP7.88□□□□□ -1.15
DDB1-207ENST00000535967 PRR3P79522 188 aaKnown RBP7.87□□□□□ -1.15
DDB1-207ENST00000535967 ATOH7Q8N100 152 aa7.87□□□□□ -1.15
DDB1-207ENST00000535967 IGKV2D-26A0A0A0MRZ7 120 aa7.86□□□□□ -1.15
DDB1-207ENST00000535967 LBHQ53QV2 105 aaPredicted RBP7.86□□□□□ -1.15
DDB1-207ENST00000535967 MIR7-3HGQ8N6C7 128 aa7.86□□□□□ -1.15
DDB1-207ENST00000535967 A0A0J9YXY3 114 aa7.86□□□□□ -1.15
DDB1-207ENST00000535967 A0A0U1RRA0 63 aa7.86□□□□□ -1.15
DDB1-207ENST00000535967 ZNF815PA8K554 130 aa7.86□□□□□ -1.15
DDB1-207ENST00000535967 OXTP01178 125 aa7.86□□□□□ -1.15
DDB1-207ENST00000535967 RPL24P83731 157 aaKnown RBP7.86□□□□□ -1.15
DDB1-207ENST00000535967 MRPL55Q7Z7F7 128 aaKnown RBP7.86□□□□□ -1.15
DDB1-207ENST00000535967 NKAPP1Q8N9T2 125 aa7.86□□□□□ -1.15
DDB1-207ENST00000535967 C22orf24Q9Y442 160 aa7.86□□□□□ -1.15
DDB1-207ENST00000535967 RNF213Q63HN8 5207 aa7.85□□□□□ -1.15
DDB1-207ENST00000535967 HSBP1L1C9JCN9 74 aa7.85□□□□□ -1.15
DDB1-207ENST00000535967 VPREB1P12018 145 aa7.85□□□□□ -1.15
DDB1-207ENST00000535967 HNRNPA3P51991 378 aaKnown RBP7.85□□□□□ -1.15
DDB1-207ENST00000535967 UBE2BP63146 152 aa7.85□□□□□ -1.15
DDB1-207ENST00000535967 TIMM17BO60830 172 aa7.84□□□□□ -1.15
DDB1-207ENST00000535967 PSORS1C2Q9UIG4 136 aa7.84□□□□□ -1.15
DDB1-207ENST00000535967 LOC107984156A0A0G2JMH3 177 aa7.83□□□□□ -1.16
DDB1-207ENST00000535967 SCGB1D1O95968 90 aa7.83□□□□□ -1.16
DDB1-207ENST00000535967 ARL17AQ8IVW1 177 aa7.83□□□□□ -1.16
DDB1-207ENST00000535967 MIEN1Q9BRT3 115 aa7.82□□□□□ -1.16
DDB1-207ENST00000535967 TTTY13Q9BZ97 58 aa7.82□□□□□ -1.16
DDB1-207ENST00000535967 BOD1L2Q8IYS8 172 aa7.81□□□□□ -1.16
DDB1-207ENST00000535967 KRTAP3-1Q9BYR8 98 aa7.81□□□□□ -1.16
DDB1-207ENST00000535967 C1orf137Q5JT78 98 aa7.8□□□□□ -1.16
DDB1-207ENST00000535967 SCGB1D4Q6XE38 83 aa7.8□□□□□ -1.16
DDB1-207ENST00000535967 KRTAP11-1Q8IUC1 163 aa7.8□□□□□ -1.16
DDB1-207ENST00000535967 DAND5Q8N907 189 aa7.8□□□□□ -1.16
DDB1-207ENST00000535967 Q8NDZ9 215 aa7.8□□□□□ -1.16
DDB1-207ENST00000535967 LINC00167Q96N53 147 aa7.8□□□□□ -1.16
DDB1-207ENST00000535967 LITAFQ99732 161 aa7.8□□□□□ -1.16
DDB1-207ENST00000535967 LRP2P98164 4655 aa7.8□□□□□ -1.16
DDB1-207ENST00000535967 TMEM238C9JI98 176 aa7.79□□□□□ -1.16
DDB1-207ENST00000535967 M0R378 163 aa7.78□□□□□ -1.16
DDB1-207ENST00000535967 NDUFC2O95298 119 aa7.78□□□□□ -1.16
DDB1-207ENST00000535967 MT1HL1P0DM35 61 aa7.78□□□□□ -1.16
DDB1-207ENST00000535967 JOSD1Q15040 202 aaPredicted RBP7.78□□□□□ -1.16
DDB1-207ENST00000535967 ADAMTSL4-AS1Q5T5F5 129 aa7.78□□□□□ -1.16
DDB1-207ENST00000535967 PCP2Q8IVA1 136 aa7.78□□□□□ -1.16
DDB1-207ENST00000535967 KRTAP4-2Q9BYR5 136 aa7.78□□□□□ -1.16
DDB1-207ENST00000535967 IGLV1-50A0A075B6I6 118 aa7.78□□□□□ -1.16
DDB1-207ENST00000535967 GAGE10A6NGK3 116 aa7.78□□□□□ -1.16
DDB1-207ENST00000535967 SPANXDQ9BXN6 97 aa7.78□□□□□ -1.16
DDB1-207ENST00000535967 SPANXCQ9NY87 97 aa7.78□□□□□ -1.16
DDB1-207ENST00000535967 TNXBP22105 4242 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms