RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 MAP1LC3CQ9BXW4 147 aa7.78□□□□□ -1.16
CLSTN3-205ENST00000535452 SCO1O75880 301 aa7.77□□□□□ -1.17
CLSTN3-205ENST00000535452 VPREB1P12018 145 aa7.77□□□□□ -1.17
CLSTN3-205ENST00000535452 C18orf32Q8TCD1 76 aa7.77□□□□□ -1.17
CLSTN3-205ENST00000535452 TMEM238C9JI98 176 aa7.76□□□□□ -1.17
CLSTN3-205ENST00000535452 SNAPINO95295 136 aa7.76□□□□□ -1.17
CLSTN3-205ENST00000535452 LPAP08519 4548 aa7.75□□□□□ -1.17
CLSTN3-205ENST00000535452 IGLV7-46A0A075B6I9 117 aa7.75□□□□□ -1.17
CLSTN3-205ENST00000535452 M0R378 163 aa7.75□□□□□ -1.17
CLSTN3-205ENST00000535452 PMCHL1Q16048 86 aa7.75□□□□□ -1.17
CLSTN3-205ENST00000535452 KRTAP13-1Q8IUC0 172 aa7.75□□□□□ -1.17
CLSTN3-205ENST00000535452 RETNLBQ9BQ08 111 aa7.75□□□□□ -1.17
CLSTN3-205ENST00000535452 A0A0U1RRA0 63 aa7.74□□□□□ -1.17
CLSTN3-205ENST00000535452 C11orf86A6NJI1 115 aa7.74□□□□□ -1.17
CLSTN3-205ENST00000535452 HERV-K104P63124 156 aa7.74□□□□□ -1.17
CLSTN3-205ENST00000535452 SVBPQ8N300 66 aa7.74□□□□□ -1.17
CLSTN3-205ENST00000535452 ETDCA0A1B0GVM5 59 aa7.73□□□□□ -1.17
CLSTN3-205ENST00000535452 APOC3P02656 99 aa7.73□□□□□ -1.17
CLSTN3-205ENST00000535452 CHCHD1Q96BP2 118 aaKnown RBP7.73□□□□□ -1.17
CLSTN3-205ENST00000535452 PRYO14603 147 aa7.72□□□□□ -1.17
CLSTN3-205ENST00000535452 KRTAP13-2Q52LG2 175 aa7.72□□□□□ -1.17
CLSTN3-205ENST00000535452 BOD1L2Q8IYS8 172 aa7.72□□□□□ -1.17
CLSTN3-205ENST00000535452 LINC00337Q8N6G1 96 aa7.72□□□□□ -1.17
CLSTN3-205ENST00000535452 IFI27L1Q96BM0 104 aa7.72□□□□□ -1.17
CLSTN3-205ENST00000535452 PLEKHB2Q96CS7 222 aa7.72□□□□□ -1.17
CLSTN3-205ENST00000535452 MIEN1Q9BRT3 115 aa7.72□□□□□ -1.17
CLSTN3-205ENST00000535452 NDUFA12Q9UI09 145 aa7.72□□□□□ -1.17
CLSTN3-205ENST00000535452 TRAV12-1A0A0B4J245 112 aa7.71□□□□□ -1.18
CLSTN3-205ENST00000535452 MYMXA0A1B0GTQ4 84 aa7.71□□□□□ -1.18
CLSTN3-205ENST00000535452 HSBP1O75506 76 aa7.71□□□□□ -1.18
CLSTN3-205ENST00000535452 TPRXLQ17RH7 258 aa7.71□□□□□ -1.18
CLSTN3-205ENST00000535452 C10orf91Q5T1B1 145 aa7.71□□□□□ -1.18
CLSTN3-205ENST00000535452 A0A096LNJ9 63 aa7.7□□□□□ -1.18
CLSTN3-205ENST00000535452 TMEM223A0PJW6 202 aa7.69□□□□□ -1.18
CLSTN3-205ENST00000535452 SMIM13P0DJ93 91 aa7.69□□□□□ -1.18
CLSTN3-205ENST00000535452 PPDPFQ9H3Y8 114 aa7.69□□□□□ -1.18
CLSTN3-205ENST00000535452 H0Y8G0 127 aa7.68□□□□□ -1.18
CLSTN3-205ENST00000535452 NCR3O14931 201 aa7.68□□□□□ -1.18
CLSTN3-205ENST00000535452 HERVK_113P61574 105 aa7.68□□□□□ -1.18
CLSTN3-205ENST00000535452 IFITM2Q01629 132 aa7.68□□□□□ -1.18
CLSTN3-205ENST00000535452 FP248Q71RG6 208 aaPredicted RBP7.68□□□□□ -1.18
CLSTN3-205ENST00000535452 SPRR4Q96PI1 79 aa7.68□□□□□ -1.18
CLSTN3-205ENST00000535452 MIR7-3HGQ8N6C7 128 aa7.67□□□□□ -1.18
CLSTN3-205ENST00000535452 URB1-AS1Q96HZ7 61 aa7.67□□□□□ -1.18
CLSTN3-205ENST00000535452 FAM19A2Q8N3H0 131 aa7.66□□□□□ -1.18
CLSTN3-205ENST00000535452 C3orf22Q8N5N4 141 aa7.66□□□□□ -1.18
CLSTN3-205ENST00000535452 SPINK1P00995 79 aa7.65□□□□□ -1.18
CLSTN3-205ENST00000535452 S100A7L2Q5SY68 101 aa7.65□□□□□ -1.18
CLSTN3-205ENST00000535452 CBY1Q9Y3M2 126 aa7.65□□□□□ -1.18
CLSTN3-205ENST00000535452 PLNP26678 52 aa7.64□□□□□ -1.19
CLSTN3-205ENST00000535452 HINT1P49773 126 aaPredicted RBP7.64□□□□□ -1.19
CLSTN3-205ENST00000535452 Q8NBF4 154 aa7.64□□□□□ -1.19
CLSTN3-205ENST00000535452 SMCR5Q8TEV8 140 aa7.64□□□□□ -1.19
CLSTN3-205ENST00000535452 LEPROTL1O95214 131 aa7.63□□□□□ -1.19
CLSTN3-205ENST00000535452 LGALS3P17931 250 aaKnown RBP7.63□□□□□ -1.19
CLSTN3-205ENST00000535452 JOSD1Q15040 202 aaPredicted RBP7.63□□□□□ -1.19
CLSTN3-205ENST00000535452 GAGE2AQ6NT46 116 aa7.63□□□□□ -1.19
CLSTN3-205ENST00000535452 KCNQ1DNQ9H478 68 aa7.63□□□□□ -1.19
CLSTN3-205ENST00000535452 HSPB8Q9UJY1 196 aa7.63□□□□□ -1.19
CLSTN3-205ENST00000535452 DDTP30046 118 aa7.62□□□□□ -1.19
CLSTN3-205ENST00000535452 TRBV10-3A0A0K0K1G6 114 aa7.61□□□□□ -1.19
CLSTN3-205ENST00000535452 NMUP48645 174 aa7.61□□□□□ -1.19
CLSTN3-205ENST00000535452 DAND5Q8N907 189 aa7.61□□□□□ -1.19
CLSTN3-205ENST00000535452 IGLV9-49A0A0B4J1Y8 123 aa7.6□□□□□ -1.19
CLSTN3-205ENST00000535452 TRBV10-2A0A0K0K1G8 114 aa7.6□□□□□ -1.19
CLSTN3-205ENST00000535452 LEPROTO15243 131 aa7.6□□□□□ -1.19
CLSTN3-205ENST00000535452 Q8NDZ9 215 aa7.6□□□□□ -1.19
CLSTN3-205ENST00000535452 SPANXB1Q9NS25 103 aaPredicted RBP7.6□□□□□ -1.19
CLSTN3-205ENST00000535452 SPRR1AP35321 89 aa7.59□□□□□ -1.19
CLSTN3-205ENST00000535452 J3QQQ9 107 aa7.58□□□□□ -1.2
CLSTN3-205ENST00000535452 DPM2O94777 84 aa7.58□□□□□ -1.2
CLSTN3-205ENST00000535452 SEC61BP60468 96 aaKnown RBP7.58□□□□□ -1.2
CLSTN3-205ENST00000535452 MOBPQ13875 183 aa7.58□□□□□ -1.2
CLSTN3-205ENST00000535452 C9orf153Q5TBE3 101 aa7.58□□□□□ -1.2
CLSTN3-205ENST00000535452 SSBP3-AS1Q7Z2R9 100 aa7.58□□□□□ -1.2
CLSTN3-205ENST00000535452 SLC25A20O43772 301 aa7.57□□□□□ -1.2
CLSTN3-205ENST00000535452 MUC2Q02817 5179 aa7.57□□□□□ -1.2
CLSTN3-205ENST00000535452 IGKCP01834 107 aa7.56□□□□□ -1.2
CLSTN3-205ENST00000535452 SLC25A34Q6PIV7 304 aa7.56□□□□□ -1.2
CLSTN3-205ENST00000535452 TRAV23DV6A0A075B6W5 121 aa7.55□□□□□ -1.2
CLSTN3-205ENST00000535452 B5MCH6 92 aa7.55□□□□□ -1.2
CLSTN3-205ENST00000535452 NDUFC2O95298 119 aa7.55□□□□□ -1.2
CLSTN3-205ENST00000535452 FABP4P15090 132 aa7.55□□□□□ -1.2
CLSTN3-205ENST00000535452 RPS29P62273 56 aaKnown RBP7.55□□□□□ -1.2
CLSTN3-205ENST00000535452 LINC00483Q53H64 154 aa7.55□□□□□ -1.2
CLSTN3-205ENST00000535452 Q6ZRX8 168 aa7.55□□□□□ -1.2
CLSTN3-205ENST00000535452 LINC01547P58512 204 aaPredicted RBP7.54□□□□□ -1.2
CLSTN3-205ENST00000535452 TRGC2P03986 189 aa7.53□□□□□ -1.2
CLSTN3-205ENST00000535452 LOC107984156A0A0G2JMH3 177 aa7.52□□□□□ -1.21
CLSTN3-205ENST00000535452 KRTAP4-16G5E9R7 235 aaPredicted RBP7.52□□□□□ -1.21
CLSTN3-205ENST00000535452 SERF1AO75920 110 aa7.52□□□□□ -1.21
CLSTN3-205ENST00000535452 ARL17AQ8IVW1 177 aa7.52□□□□□ -1.21
CLSTN3-205ENST00000535452 OR13C6PQ8NH95 151 aa7.52□□□□□ -1.21
CLSTN3-205ENST00000535452 C5orf52A6NGY3 159 aa7.51□□□□□ -1.21
CLSTN3-205ENST00000535452 ZNF73O43830 326 aaPredicted RBP7.51□□□□□ -1.21
CLSTN3-205ENST00000535452 LIMD2Q9BT23 127 aa7.51□□□□□ -1.21
CLSTN3-205ENST00000535452 NPC2P61916 151 aa7.5□□□□□ -1.21
CLSTN3-205ENST00000535452 TSPEAR-AS2P59090 65 aa7.49□□□□□ -1.21
CLSTN3-205ENST00000535452 KRTAP13-3Q3SY46 172 aa7.49□□□□□ -1.21
CLSTN3-205ENST00000535452 KRTAP9-2Q9BYQ4 174 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 206.6 ms