RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 ODF3BA8MYP8 253 aa3.26□□□□□ -1.89
SNHG1-201ENST00000535076 IGHV1-46P01743 117 aa3.26□□□□□ -1.89
SNHG1-201ENST00000535076 CCL3L1P16619 93 aa3.26□□□□□ -1.89
SNHG1-201ENST00000535076 CAMK2N1Q7Z7J9 78 aa3.26□□□□□ -1.89
SNHG1-201ENST00000535076 Q8N9L7 120 aa3.26□□□□□ -1.89
SNHG1-201ENST00000535076 C7orf33Q8WU49 177 aa3.26□□□□□ -1.89
SNHG1-201ENST00000535076 CCL26Q9Y258 94 aa3.26□□□□□ -1.89
SNHG1-201ENST00000535076 A6NDX4 124 aa3.25□□□□□ -1.89
SNHG1-201ENST00000535076 Q8IZM0 81 aa3.25□□□□□ -1.89
SNHG1-201ENST00000535076 Q8N9W7 124 aa3.25□□□□□ -1.89
SNHG1-201ENST00000535076 IGLV5-37A0A075B6J1 123 aa3.24□□□□□ -1.89
SNHG1-201ENST00000535076 TNRC18O15417 2968 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-201ENST00000535076 IGLV6-57P01721 117 aa3.24□□□□□ -1.89
SNHG1-201ENST00000535076 HTTP42858 3142 aa3.24□□□□□ -1.89
SNHG1-201ENST00000535076 DSCR10P59022 87 aa3.23□□□□□ -1.89
SNHG1-201ENST00000535076 Q5W150 140 aa3.23□□□□□ -1.89
SNHG1-201ENST00000535076 TMEM105Q8N8V8 129 aa3.23□□□□□ -1.89
SNHG1-201ENST00000535076 PLCE1Q9P212 2302 aa3.22□□□□□ -1.89
SNHG1-201ENST00000535076 CENPFP49454 3210 aa3.22□□□□□ -1.89
SNHG1-201ENST00000535076 IGKV3-7A0A075B6H7 116 aa3.22□□□□□ -1.89
SNHG1-201ENST00000535076 IGLV5-52A0A0A0MRZ9 124 aa3.22□□□□□ -1.89
SNHG1-201ENST00000535076 DEFB113Q30KQ7 82 aa3.22□□□□□ -1.89
SNHG1-201ENST00000535076 DEC1Q9P2X7 70 aa3.22□□□□□ -1.89
SNHG1-201ENST00000535076 A0A0C4DFX4 3053 aa3.21□□□□□ -1.9
SNHG1-201ENST00000535076 IGKV2D-30A0A075B6S6 120 aa3.21□□□□□ -1.9
SNHG1-201ENST00000535076 TP53AIP1Q9HCN2 124 aa3.21□□□□□ -1.9
SNHG1-201ENST00000535076 KLK12Q9UKR0 248 aa3.21□□□□□ -1.9
SNHG1-201ENST00000535076 URB1O60287 2271 aaKnown RBP3.21□□□□□ -1.9
SNHG1-201ENST00000535076 DNAH12Q6ZR08 3092 aa3.21□□□□□ -1.9
SNHG1-201ENST00000535076 SORL1Q92673 2214 aa3.2□□□□□ -1.9
SNHG1-201ENST00000535076 IGLV8-61A0A075B6I0 122 aa3.2□□□□□ -1.9
SNHG1-201ENST00000535076 A8MUU9 505 aa3.2□□□□□ -1.9
SNHG1-201ENST00000535076 HRES1P13985 223 aa3.2□□□□□ -1.9
SNHG1-201ENST00000535076 BRWD1Q9NSI6 2320 aa3.19□□□□□ -1.9
SNHG1-201ENST00000535076 TRGV1A0A0A0MS02 117 aa3.19□□□□□ -1.9
SNHG1-201ENST00000535076 PRB1P04280 392 aa3.19□□□□□ -1.9
SNHG1-201ENST00000535076 PRB3Q04118 309 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-201ENST00000535076 Q8NBF4 154 aa3.19□□□□□ -1.9
SNHG1-201ENST00000535076 TRIOBPQ9H2D6 2365 aa3.18□□□□□ -1.9
SNHG1-201ENST00000535076 RANBP2P49792 3224 aaKnown RBP3.18□□□□□ -1.9
SNHG1-201ENST00000535076 MED13LQ71F56 2210 aa3.18□□□□□ -1.9
SNHG1-201ENST00000535076 IGKV3OR2-268A0A0C4DH90 116 aa3.18□□□□□ -1.9
SNHG1-201ENST00000535076 A0A1B0GU69 56 aa3.18□□□□□ -1.9
SNHG1-201ENST00000535076 NDUFAF8A1L188 74 aa3.18□□□□□ -1.9
SNHG1-201ENST00000535076 RPL37AP8A6NKH3 93 aa3.18□□□□□ -1.9
SNHG1-201ENST00000535076 K7EQZ3 153 aa3.18□□□□□ -1.9
SNHG1-201ENST00000535076 PRB2P02812 416 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-201ENST00000535076 TLX1NBP0CAT3 122 aa3.18□□□□□ -1.9
SNHG1-201ENST00000535076 LINC00472Q9H8W2 130 aa3.18□□□□□ -1.9
SNHG1-201ENST00000535076 KAAG1Q9UBP8 84 aa3.18□□□□□ -1.9
SNHG1-201ENST00000535076 MKI67P46013 3256 aaKnown RBP3.18□□□□□ -1.9
SNHG1-201ENST00000535076 A0A1B0GVX0 72 aa3.17□□□□□ -1.9
SNHG1-201ENST00000535076 KRTAP10-6P60371 365 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-201ENST00000535076 DEFB104AQ8WTQ1 72 aa3.17□□□□□ -1.9
SNHG1-201ENST00000535076 PATE1Q8WXA2 126 aa3.17□□□□□ -1.9
SNHG1-201ENST00000535076 SDK1Q7Z5N4 2213 aa3.17□□□□□ -1.9
SNHG1-201ENST00000535076 BRCA2P51587 3418 aa3.17□□□□□ -1.9
SNHG1-201ENST00000535076 KMT2BQ9UMN6 2715 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-201ENST00000535076 ASCC3Q8N3C0 2202 aaKnown RBP3.16□□□□□ -1.9
SNHG1-201ENST00000535076 LYNX1G3V0Z9 82 aa3.16□□□□□ -1.9
SNHG1-201ENST00000535076 ACYP2P14621 99 aa3.16□□□□□ -1.9
SNHG1-201ENST00000535076 MINOS1Q5TGZ0 78 aa3.16□□□□□ -1.9
SNHG1-201ENST00000535076 C15orf56Q8N910 161 aa3.16□□□□□ -1.9
SNHG1-201ENST00000535076 ZNRD1Q9P1U0 126 aa3.16□□□□□ -1.9
SNHG1-201ENST00000535076 LAMA2P24043 3122 aaKnown RBP3.15□□□□□ -1.9
SNHG1-201ENST00000535076 SPTY2D1-AS1A0A0U1RR47 76 aa3.15□□□□□ -1.91
SNHG1-201ENST00000535076 PANO1I0J062 215 aa3.15□□□□□ -1.91
SNHG1-201ENST00000535076 APELAP0DMC3 54 aa3.15□□□□□ -1.91
SNHG1-201ENST00000535076 CIRBP-AS1Q8TBR5 109 aa3.15□□□□□ -1.91
SNHG1-201ENST00000535076 TOMM7Q9P0U1 55 aa3.15□□□□□ -1.91
SNHG1-201ENST00000535076 A0A0J9YWU9 116 aa3.14□□□□□ -1.91
SNHG1-201ENST00000535076 ANGP03950 147 aaKnown RBP3.14□□□□□ -1.91
SNHG1-201ENST00000535076 IGLV7-43P04211 117 aa3.14□□□□□ -1.91
SNHG1-201ENST00000535076 KRTAP10-7P60409 375 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-201ENST00000535076 CHD9Q3L8U1 2897 aa3.14□□□□□ -1.91
SNHG1-201ENST00000535076 NCOR1O75376 2440 aa3.14□□□□□ -1.91
SNHG1-201ENST00000535076 KNL1Q8NG31 2342 aa3.14□□□□□ -1.91
SNHG1-201ENST00000535076 CUL9Q8IWT3 2517 aa3.14□□□□□ -1.91
SNHG1-201ENST00000535076 A0A087WTM6 91 aa3.13□□□□□ -1.91
SNHG1-201ENST00000535076 GVQW2A0A096LPI5 108 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-201ENST00000535076 A8MTW9 85 aa3.13□□□□□ -1.91
SNHG1-201ENST00000535076 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
SNHG1-201ENST00000535076 ASXL3Q9C0F0 2248 aa3.13□□□□□ -1.91
SNHG1-201ENST00000535076 BDP1A6H8Y1 2624 aa3.13□□□□□ -1.91
SNHG1-201ENST00000535076 TRANK1O15050 2925 aa3.13□□□□□ -1.91
SNHG1-201ENST00000535076 ABCA1O95477 2261 aa3.12□□□□□ -1.91
SNHG1-201ENST00000535076 ABCA4P78363 2273 aa3.12□□□□□ -1.91
SNHG1-201ENST00000535076 ANAPC11Q9NYG5 84 aa3.12□□□□□ -1.91
SNHG1-201ENST00000535076 DHRS4-AS1Q9P1J3 65 aa3.12□□□□□ -1.91
SNHG1-201ENST00000535076 SZT2Q5T011 3432 aa3.12□□□□□ -1.91
SNHG1-201ENST00000535076 TTC28Q96AY4 2481 aa3.11□□□□□ -1.91
SNHG1-201ENST00000535076 PRO3102Q9H379 93 aa3.11□□□□□ -1.91
SNHG1-201ENST00000535076 IGKV2-24A0A0C4DH68 120 aa3.1□□□□□ -1.91
SNHG1-201ENST00000535076 C4orf3Q8WVX3 66 aa3.1□□□□□ -1.91
SNHG1-201ENST00000535076 WDR87Q6ZQQ6 2873 aa3.1□□□□□ -1.91
SNHG1-201ENST00000535076 LAMA3Q16787 3333 aa3.09□□□□□ -1.91
SNHG1-201ENST00000535076 CHD7Q9P2D1 2997 aa3.09□□□□□ -1.91
SNHG1-201ENST00000535076 A0A1B0GUV1 79 aa3.09□□□□□ -1.91
SNHG1-201ENST00000535076 H3BUA1 57 aa3.09□□□□□ -1.91
SNHG1-201ENST00000535076 SPINT4Q6UDR6 99 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms