RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 PFN2P35080 140 aa8.47□□□□□ -1.05
SHARPIN-208ENST00000533948 TMEM170BQ5T4T1 132 aa8.47□□□□□ -1.05
SHARPIN-208ENST00000533948 LINC00167Q96N53 147 aa8.47□□□□□ -1.05
SHARPIN-208ENST00000533948 HSPB8Q9UJY1 196 aa8.47□□□□□ -1.05
SHARPIN-208ENST00000533948 C11orf86A6NJI1 115 aa8.46□□□□□ -1.06
SHARPIN-208ENST00000533948 RPL37AP8A6NKH3 93 aa8.46□□□□□ -1.06
SHARPIN-208ENST00000533948 TRAV12-1A0A0B4J245 112 aa8.45□□□□□ -1.06
SHARPIN-208ENST00000533948 TYMSOSQ8TAI1 123 aa8.45□□□□□ -1.06
SHARPIN-208ENST00000533948 IGLV5-37A0A075B6J1 123 aa8.44□□□□□ -1.06
SHARPIN-208ENST00000533948 GAGE10A6NGK3 116 aa8.44□□□□□ -1.06
SHARPIN-208ENST00000533948 BCE1O60756 84 aa8.44□□□□□ -1.06
SHARPIN-208ENST00000533948 CRYGAP11844 174 aa8.44□□□□□ -1.06
SHARPIN-208ENST00000533948 FABP4P15090 132 aa8.44□□□□□ -1.06
SHARPIN-208ENST00000533948 COA6Q5JTJ3 125 aaKnown RBP8.44□□□□□ -1.06
SHARPIN-208ENST00000533948 NKAPP1Q8N9T2 125 aa8.44□□□□□ -1.06
SHARPIN-208ENST00000533948 ZNF625Q96I27 306 aaPredicted RBP8.44□□□□□ -1.06
SHARPIN-208ENST00000533948 CHTOPQ9Y3Y2 248 aaKnown RBP8.44□□□□□ -1.06
SHARPIN-208ENST00000533948 RPL28P46779 137 aaKnown RBP8.43□□□□□ -1.06
SHARPIN-208ENST00000533948 H0Y8G0 127 aa8.42□□□□□ -1.06
SHARPIN-208ENST00000533948 ERG28Q9UKR5 140 aa8.42□□□□□ -1.06
SHARPIN-208ENST00000533948 MAP1LC3CQ9BXW4 147 aa8.41□□□□□ -1.06
SHARPIN-208ENST00000533948 SND1-IT1Q9HBX3 110 aa8.41□□□□□ -1.06
SHARPIN-208ENST00000533948 A0A087X002 238 aa8.4□□□□□ -1.06
SHARPIN-208ENST00000533948 S100A6P06703 90 aa8.4□□□□□ -1.06
SHARPIN-208ENST00000533948 COX17Q14061 63 aa8.4□□□□□ -1.06
SHARPIN-208ENST00000533948 MUC17Q685J3 4493 aa8.39□□□□□ -1.07
SHARPIN-208ENST00000533948 VPREB1P12018 145 aa8.39□□□□□ -1.07
SHARPIN-208ENST00000533948 IGKV2-28A0A075B6P5 120 aa8.38□□□□□ -1.07
SHARPIN-208ENST00000533948 A0A0U1RRA0 63 aa8.38□□□□□ -1.07
SHARPIN-208ENST00000533948 IGKV2D-28P01615 120 aa8.38□□□□□ -1.07
SHARPIN-208ENST00000533948 LINC00158P58513 81 aa8.38□□□□□ -1.07
SHARPIN-208ENST00000533948 SFTA2Q6UW10 78 aa8.38□□□□□ -1.07
SHARPIN-208ENST00000533948 CDIP1Q9H305 208 aa8.38□□□□□ -1.07
SHARPIN-208ENST00000533948 TMEM223A0PJW6 202 aa8.37□□□□□ -1.07
SHARPIN-208ENST00000533948 PLNP26678 52 aa8.37□□□□□ -1.07
SHARPIN-208ENST00000533948 KRTAP13-1Q8IUC0 172 aa8.37□□□□□ -1.07
SHARPIN-208ENST00000533948 Q8NDZ9 215 aa8.37□□□□□ -1.07
SHARPIN-208ENST00000533948 UBE2AP49459 152 aa8.36□□□□□ -1.07
SHARPIN-208ENST00000533948 RPL24P83731 157 aaKnown RBP8.36□□□□□ -1.07
SHARPIN-208ENST00000533948 SYS1-DBNDD2H3BUS1 97 aa8.35□□□□□ -1.07
SHARPIN-208ENST00000533948 DPM2O94777 84 aa8.35□□□□□ -1.07
SHARPIN-208ENST00000533948 S100A2P29034 98 aa8.35□□□□□ -1.07
SHARPIN-208ENST00000533948 RETNLBQ9BQ08 111 aa8.35□□□□□ -1.07
SHARPIN-208ENST00000533948 ANAPC11Q9NYG5 84 aa8.35□□□□□ -1.07
SHARPIN-208ENST00000533948 TMEM238C9JI98 176 aa8.34□□□□□ -1.07
SHARPIN-208ENST00000533948 MEIG1Q5JSS6 88 aa8.34□□□□□ -1.07
SHARPIN-208ENST00000533948 IGKCP01834 107 aa8.33□□□□□ -1.08
SHARPIN-208ENST00000533948 KRTDAPP60985 99 aa8.33□□□□□ -1.08
SHARPIN-208ENST00000533948 PET117Q6UWS5 81 aa8.33□□□□□ -1.08
SHARPIN-208ENST00000533948 HIST3H2BBQ8N257 126 aa8.33□□□□□ -1.08
SHARPIN-208ENST00000533948 LINC00304Q8N9R0 145 aa8.33□□□□□ -1.08
SHARPIN-208ENST00000533948 IGLV7-46A0A075B6I9 117 aa8.32□□□□□ -1.08
SHARPIN-208ENST00000533948 C3orf79P0CE67 100 aa8.32□□□□□ -1.08
SHARPIN-208ENST00000533948 PRLHP81277 87 aa8.32□□□□□ -1.08
SHARPIN-208ENST00000533948 TPRXLQ17RH7 258 aa8.32□□□□□ -1.08
SHARPIN-208ENST00000533948 PMCHL2Q9BQD1 86 aa8.32□□□□□ -1.08
SHARPIN-208ENST00000533948 TMEM126AQ9H061 195 aa8.32□□□□□ -1.08
SHARPIN-208ENST00000533948 IGKV2D-26A0A0A0MRZ7 120 aa8.31□□□□□ -1.08
SHARPIN-208ENST00000533948 C20orf202A1L168 122 aa8.31□□□□□ -1.08
SHARPIN-208ENST00000533948 M0R378 163 aa8.31□□□□□ -1.08
SHARPIN-208ENST00000533948 SMIM13P0DJ93 91 aa8.31□□□□□ -1.08
SHARPIN-208ENST00000533948 FAM229BQ4G0N7 80 aa8.31□□□□□ -1.08
SHARPIN-208ENST00000533948 KRTAP13-2Q52LG2 175 aa8.31□□□□□ -1.08
SHARPIN-208ENST00000533948 FAM19A1Q7Z5A9 133 aa8.31□□□□□ -1.08
SHARPIN-208ENST00000533948 HIST1H2BLQ99880 126 aa8.31□□□□□ -1.08
SHARPIN-208ENST00000533948 HERVK_113P61574 105 aa8.3□□□□□ -1.08
SHARPIN-208ENST00000533948 SNRPEP62304 92 aaKnown RBP8.3□□□□□ -1.08
SHARPIN-208ENST00000533948 CTAG1AP78358 180 aa8.3□□□□□ -1.08
SHARPIN-208ENST00000533948 LINC01545Q5VT33 79 aa8.3□□□□□ -1.08
SHARPIN-208ENST00000533948 NDUFA12Q9UI09 145 aa8.29□□□□□ -1.08
SHARPIN-208ENST00000533948 MYMXA0A1B0GTQ4 84 aa8.28□□□□□ -1.08
SHARPIN-208ENST00000533948 C5orf52A6NGY3 159 aa8.28□□□□□ -1.08
SHARPIN-208ENST00000533948 AKR1D1P51857 326 aa8.28□□□□□ -1.08
SHARPIN-208ENST00000533948 HERV-K104P63124 156 aa8.28□□□□□ -1.08
SHARPIN-208ENST00000533948 LINC00587B1AMM8 73 aa8.27□□□□□ -1.09
SHARPIN-208ENST00000533948 BOD1L2Q8IYS8 172 aa8.27□□□□□ -1.09
SHARPIN-208ENST00000533948 MIR7-3HGQ8N6C7 128 aa8.27□□□□□ -1.09
SHARPIN-208ENST00000533948 TSPEAR-AS2P59090 65 aa8.26□□□□□ -1.09
SHARPIN-208ENST00000533948 PLEKHB2Q96CS7 222 aa8.26□□□□□ -1.09
SHARPIN-208ENST00000533948 PPDPFQ9H3Y8 114 aa8.26□□□□□ -1.09
SHARPIN-208ENST00000533948 LEPROTO15243 131 aa8.25□□□□□ -1.09
SHARPIN-208ENST00000533948 FSIP2Q5CZC0 6907 aa8.24□□□□□ -1.09
SHARPIN-208ENST00000533948 NCR3O14931 201 aa8.24□□□□□ -1.09
SHARPIN-208ENST00000533948 LGALS3P17931 250 aaKnown RBP8.24□□□□□ -1.09
SHARPIN-208ENST00000533948 HIGD2AQ9BW72 106 aa8.24□□□□□ -1.09
SHARPIN-208ENST00000533948 E9PLD3 99 aa8.23□□□□□ -1.09
SHARPIN-208ENST00000533948 J3QQQ9 107 aa8.23□□□□□ -1.09
SHARPIN-208ENST00000533948 TMA7Q9Y2S6 64 aaKnown RBP8.23□□□□□ -1.09
SHARPIN-208ENST00000533948 S100A12P80511 92 aa8.22□□□□□ -1.09
SHARPIN-208ENST00000533948 LINC00337Q8N6G1 96 aa8.22□□□□□ -1.09
SHARPIN-208ENST00000533948 PRYO14603 147 aa8.21□□□□□ -1.1
SHARPIN-208ENST00000533948 NMUP48645 174 aa8.21□□□□□ -1.1
SHARPIN-208ENST00000533948 LCE2DQ5TA82 110 aaPredicted RBP8.21□□□□□ -1.1
SHARPIN-208ENST00000533948 SPAG11AQ6PDA7 123 aa8.21□□□□□ -1.1
SHARPIN-208ENST00000533948 DAND5Q8N907 189 aa8.21□□□□□ -1.1
SHARPIN-208ENST00000533948 MIEN1Q9BRT3 115 aa8.21□□□□□ -1.1
SHARPIN-208ENST00000533948 KCNQ1DNQ9H478 68 aa8.21□□□□□ -1.1
SHARPIN-208ENST00000533948 CRCT1Q9UGL9 99 aa8.21□□□□□ -1.1
SHARPIN-208ENST00000533948 SPRR1AP35321 89 aa8.2□□□□□ -1.1
SHARPIN-208ENST00000533948 ATOH7Q8N100 152 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms