RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 NTN5Q8WTR8 489 aaPredicted RBP8.78□□□□□ -1
TRAPPC4-214ENST00000533632 PGPEP1Q9NXJ5 209 aa8.78□□□□□ -1
TRAPPC4-214ENST00000533632 C2orf48Q96LS8 159 aa8.77□□□□□ -1.01
TRAPPC4-214ENST00000533632 LOC107984156A0A0G2JMH3 177 aa8.76□□□□□ -1.01
TRAPPC4-214ENST00000533632 PFN2P35080 140 aa8.76□□□□□ -1.01
TRAPPC4-214ENST00000533632 NPC2P61916 151 aa8.76□□□□□ -1.01
TRAPPC4-214ENST00000533632 ARL17AQ8IVW1 177 aa8.76□□□□□ -1.01
TRAPPC4-214ENST00000533632 SOSTDC1Q6X4U4 206 aa8.76□□□□□ -1.01
TRAPPC4-214ENST00000533632 GTF2H5Q6ZYL4 71 aa8.76□□□□□ -1.01
TRAPPC4-214ENST00000533632 LRP1BQ9NZR2 4599 aa8.76□□□□□ -1.01
TRAPPC4-214ENST00000533632 TRBV30A0A0K0K1B3 111 aa8.75□□□□□ -1.01
TRAPPC4-214ENST00000533632 SLPIP03973 132 aa8.75□□□□□ -1.01
TRAPPC4-214ENST00000533632 UBE2V1Q13404 147 aa8.75□□□□□ -1.01
TRAPPC4-214ENST00000533632 LYRM7Q5U5X0 104 aa8.75□□□□□ -1.01
TRAPPC4-214ENST00000533632 EIF4EBP3O60516 100 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC4-214ENST00000533632 TSPAN13O95857 204 aa8.74□□□□□ -1.01
TRAPPC4-214ENST00000533632 FUSP35637 526 aaKnown RBP eCLIP8.74□□□□□ -1.01
TRAPPC4-214ENST00000533632 UNQ6190/PRO20217Q6UXQ8 127 aa8.74□□□□□ -1.01
TRAPPC4-214ENST00000533632 Q8N814 137 aa8.74□□□□□ -1.01
TRAPPC4-214ENST00000533632 GAGE10A6NGK3 116 aa8.73□□□□□ -1.01
TRAPPC4-214ENST00000533632 CAMK2N2Q96S95 79 aa8.73□□□□□ -1.01
TRAPPC4-214ENST00000533632 NAA38Q9BRA0 125 aaKnown RBP8.73□□□□□ -1.01
TRAPPC4-214ENST00000533632 SND1-IT1Q9HBX3 110 aa8.73□□□□□ -1.01
TRAPPC4-214ENST00000533632 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC4-214ENST00000533632 TRAV13-2A0A0B4J235 113 aa8.72□□□□□ -1.01
TRAPPC4-214ENST00000533632 K7EP34 96 aa8.72□□□□□ -1.01
TRAPPC4-214ENST00000533632 KRTAP10-2P60368 255 aa8.72□□□□□ -1.01
TRAPPC4-214ENST00000533632 SPCS1Q9Y6A9 102 aa8.72□□□□□ -1.01
TRAPPC4-214ENST00000533632 C10orf25Q5T742 122 aa8.71□□□□□ -1.01
TRAPPC4-214ENST00000533632 NDUFC2O95298 119 aa8.71□□□□□ -1.02
TRAPPC4-214ENST00000533632 Q1RN00 199 aa8.7□□□□□ -1.02
TRAPPC4-214ENST00000533632 C6orf48Q9UBA6 75 aa8.7□□□□□ -1.02
TRAPPC4-214ENST00000533632 RNF151Q2KHN1 245 aa8.69□□□□□ -1.02
TRAPPC4-214ENST00000533632 C14orf177Q52M58 125 aa8.69□□□□□ -1.02
TRAPPC4-214ENST00000533632 C9orf116Q5BN46 136 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC4-214ENST00000533632 TRBV20-1A0A075B6N2 111 aa8.68□□□□□ -1.02
TRAPPC4-214ENST00000533632 RPL13AP40429 203 aaKnown RBP8.68□□□□□ -1.02
TRAPPC4-214ENST00000533632 PSMB2P49721 201 aa8.68□□□□□ -1.02
TRAPPC4-214ENST00000533632 SYCNQ0VAF6 134 aa8.68□□□□□ -1.02
TRAPPC4-214ENST00000533632 Q6ZRU5 148 aa8.68□□□□□ -1.02
TRAPPC4-214ENST00000533632 COX6CP09669 75 aa8.68□□□□□ -1.02
TRAPPC4-214ENST00000533632 CNBPP62633 177 aaKnown RBP8.68□□□□□ -1.02
TRAPPC4-214ENST00000533632 H7C2G1 150 aa8.67□□□□□ -1.02
TRAPPC4-214ENST00000533632 APOBP04114 4563 aaKnown RBP8.67□□□□□ -1.02
TRAPPC4-214ENST00000533632 SCGB1C2P0DMR2 95 aa8.67□□□□□ -1.02
TRAPPC4-214ENST00000533632 KIAA1109Q2LD37 5005 aa8.67□□□□□ -1.02
TRAPPC4-214ENST00000533632 NDUFC2-KCTD14E9PQ53 114 aa8.66□□□□□ -1.02
TRAPPC4-214ENST00000533632 LINC01620Q4KN68 170 aa8.66□□□□□ -1.02
TRAPPC4-214ENST00000533632 VPS25Q9BRG1 176 aa8.66□□□□□ -1.02
TRAPPC4-214ENST00000533632 IGKV2-28A0A075B6P5 120 aa8.66□□□□□ -1.02
TRAPPC4-214ENST00000533632 IGKV2D-28P01615 120 aa8.66□□□□□ -1.02
TRAPPC4-214ENST00000533632 CARD19Q96LW7 228 aa8.66□□□□□ -1.02
TRAPPC4-214ENST00000533632 DNAH8Q96JB1 4490 aa8.65□□□□□ -1.02
TRAPPC4-214ENST00000533632 LINC00337Q8N6G1 96 aa8.64□□□□□ -1.03
TRAPPC4-214ENST00000533632 TRIAP1O43715 76 aa8.63□□□□□ -1.03
TRAPPC4-214ENST00000533632 TLX1NBP0CAT3 122 aa8.63□□□□□ -1.03
TRAPPC4-214ENST00000533632 IGLV5-52A0A0A0MRZ9 124 aa8.63□□□□□ -1.03
TRAPPC4-214ENST00000533632 C9orf163Q8N9P6 203 aa8.63□□□□□ -1.03
TRAPPC4-214ENST00000533632 TRBV10-2A0A0K0K1G8 114 aa8.62□□□□□ -1.03
TRAPPC4-214ENST00000533632 SCGB1A1P11684 91 aa8.62□□□□□ -1.03
TRAPPC4-214ENST00000533632 RPL28P46779 137 aaKnown RBP8.62□□□□□ -1.03
TRAPPC4-214ENST00000533632 C16orf90A8MZG2 172 aa8.61□□□□□ -1.03
TRAPPC4-214ENST00000533632 TMEM126AQ9H061 195 aa8.61□□□□□ -1.03
TRAPPC4-214ENST00000533632 HSPG2P98160 4391 aa8.61□□□□□ -1.03
TRAPPC4-214ENST00000533632 RYR1P21817 5038 aa8.61□□□□□ -1.03
TRAPPC4-214ENST00000533632 A0A1B0GV72 72 aa8.61□□□□□ -1.03
TRAPPC4-214ENST00000533632 F8W1H4 67 aa8.61□□□□□ -1.03
TRAPPC4-214ENST00000533632 H3BMG7 143 aa8.61□□□□□ -1.03
TRAPPC4-214ENST00000533632 TCL1BO95988 128 aa8.61□□□□□ -1.03
TRAPPC4-214ENST00000533632 ATXN8Q156A1 80 aa8.61□□□□□ -1.03
TRAPPC4-214ENST00000533632 OR13C6PQ8NH95 151 aa8.6□□□□□ -1.03
TRAPPC4-214ENST00000533632 SDIM1Q6ZPB5 146 aa8.59□□□□□ -1.03
TRAPPC4-214ENST00000533632 KRTAP10-1P60331 282 aa8.58□□□□□ -1.04
TRAPPC4-214ENST00000533632 Q6ZRP5 223 aa8.58□□□□□ -1.04
TRAPPC4-214ENST00000533632 XAGE1AQ9HD64 81 aa8.58□□□□□ -1.04
TRAPPC4-214ENST00000533632 K7ERU9 68 aa8.58□□□□□ -1.04
TRAPPC4-214ENST00000533632 SMIM11BQ8TCY0 68 aa8.58□□□□□ -1.04
TRAPPC4-214ENST00000533632 H0YGX0 51 aa8.57□□□□□ -1.04
TRAPPC4-214ENST00000533632 PANO1I0J062 215 aa8.57□□□□□ -1.04
TRAPPC4-214ENST00000533632 S100A7L2Q5SY68 101 aa8.57□□□□□ -1.04
TRAPPC4-214ENST00000533632 HERC2O95714 4834 aa8.57□□□□□ -1.04
TRAPPC4-214ENST00000533632 A0A096LNI7 61 aa8.56□□□□□ -1.04
TRAPPC4-214ENST00000533632 CHTF8P0CG12 524 aa8.56□□□□□ -1.04
TRAPPC4-214ENST00000533632 LOC107984640A0A0U1RRK4 108 aa8.56□□□□□ -1.04
TRAPPC4-214ENST00000533632 LST1O00453 97 aa8.56□□□□□ -1.04
TRAPPC4-214ENST00000533632 PRR3P79522 188 aaKnown RBP8.56□□□□□ -1.04
TRAPPC4-214ENST00000533632 RPL18AQ02543 176 aaKnown RBP8.56□□□□□ -1.04
TRAPPC4-214ENST00000533632 GAGE2EQ4V326 116 aa8.56□□□□□ -1.04
TRAPPC4-214ENST00000533632 GAGE2DQ9UEU5 116 aa8.56□□□□□ -1.04
TRAPPC4-214ENST00000533632 PLA2G2DQ9UNK4 145 aa8.56□□□□□ -1.04
TRAPPC4-214ENST00000533632 PKIGQ9Y2B9 76 aa8.56□□□□□ -1.04
TRAPPC4-214ENST00000533632 NCR3O14931 201 aa8.55□□□□□ -1.04
TRAPPC4-214ENST00000533632 VPREB1P12018 145 aa8.55□□□□□ -1.04
TRAPPC4-214ENST00000533632 Q8NDZ9 215 aa8.55□□□□□ -1.04
TRAPPC4-214ENST00000533632 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC4-214ENST00000533632 M0R378 163 aa8.54□□□□□ -1.04
TRAPPC4-214ENST00000533632 IGLV6-57P01721 117 aa8.54□□□□□ -1.04
TRAPPC4-214ENST00000533632 GAGE2BQ13066 116 aa8.54□□□□□ -1.04
TRAPPC4-214ENST00000533632 OCIAD2Q56VL3 154 aa8.54□□□□□ -1.04
TRAPPC4-214ENST00000533632 PRO0461Q9UI25 63 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms