RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 ZNF861PO60384 105 aa3.42□□□□□ -1.86
CD44-236ENST00000533222 CAMK2N1Q7Z7J9 78 aa3.42□□□□□ -1.86
CD44-236ENST00000533222 ST20-AS1Q8NBB2 130 aa3.42□□□□□ -1.86
CD44-236ENST00000533222 C7orf33Q8WU49 177 aa3.42□□□□□ -1.86
CD44-236ENST00000533222 TP53AIP1Q9HCN2 124 aa3.42□□□□□ -1.86
CD44-236ENST00000533222 BRWD1Q9NSI6 2320 aa3.41□□□□□ -1.86
CD44-236ENST00000533222 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
CD44-236ENST00000533222 A8MWP4 228 aa3.41□□□□□ -1.86
CD44-236ENST00000533222 MAPK1IP1LQ8NDC0 245 aa3.41□□□□□ -1.86
CD44-236ENST00000533222 NUPR2A6NF83 97 aa3.4□□□□□ -1.87
CD44-236ENST00000533222 ODF3BA8MYP8 253 aa3.4□□□□□ -1.87
CD44-236ENST00000533222 TFF1P04155 84 aa3.4□□□□□ -1.87
CD44-236ENST00000533222 P0C880 135 aa3.4□□□□□ -1.87
CD44-236ENST00000533222 DNAH10OSP0CZ25 163 aa3.4□□□□□ -1.87
CD44-236ENST00000533222 CCL3L1P16619 93 aa3.4□□□□□ -1.87
CD44-236ENST00000533222 DSCR10P59022 87 aa3.4□□□□□ -1.87
CD44-236ENST00000533222 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
CD44-236ENST00000533222 SPINK14Q6IE38 97 aa3.4□□□□□ -1.87
CD44-236ENST00000533222 A6NDX4 124 aa3.39□□□□□ -1.87
CD44-236ENST00000533222 Q8N9W7 124 aa3.39□□□□□ -1.87
CD44-236ENST00000533222 A0A0J9YWU9 116 aa3.38□□□□□ -1.87
CD44-236ENST00000533222 SPTY2D1-AS1A0A0U1RR47 76 aa3.38□□□□□ -1.87
CD44-236ENST00000533222 MINOS1Q5TGZ0 78 aa3.38□□□□□ -1.87
CD44-236ENST00000533222 Q5W150 140 aa3.38□□□□□ -1.87
CD44-236ENST00000533222 TMEM105Q8N8V8 129 aa3.38□□□□□ -1.87
CD44-236ENST00000533222 Q8NBF4 154 aa3.38□□□□□ -1.87
CD44-236ENST00000533222 A0A0C4DFX4 3053 aa3.38□□□□□ -1.87
CD44-236ENST00000533222 PLCE1Q9P212 2302 aa3.38□□□□□ -1.87
CD44-236ENST00000533222 A8MTW9 85 aa3.37□□□□□ -1.87
CD44-236ENST00000533222 CMC4P56277 68 aaPredicted RBP3.37□□□□□ -1.87
CD44-236ENST00000533222 KRTAP10-7P60409 375 aaPredicted RBP3.37□□□□□ -1.87
CD44-236ENST00000533222 Q8N9L7 120 aa3.37□□□□□ -1.87
CD44-236ENST00000533222 LYNX1G3V0Z9 82 aa3.36□□□□□ -1.87
CD44-236ENST00000533222 URB1O60287 2271 aaKnown RBP3.36□□□□□ -1.87
CD44-236ENST00000533222 IGKV3-7A0A075B6H7 116 aa3.35□□□□□ -1.87
CD44-236ENST00000533222 GVQW2A0A096LPI5 108 aaPredicted RBP3.35□□□□□ -1.87
CD44-236ENST00000533222 H3BUA1 57 aa3.35□□□□□ -1.87
CD44-236ENST00000533222 HRES1P13985 223 aa3.35□□□□□ -1.87
CD44-236ENST00000533222 ANAPC11Q9NYG5 84 aa3.35□□□□□ -1.87
CD44-236ENST00000533222 KLK12Q9UKR0 248 aa3.35□□□□□ -1.87
CD44-236ENST00000533222 PATE1Q8WXA2 126 aa3.34□□□□□ -1.87
CD44-236ENST00000533222 IGLV8-61A0A075B6I0 122 aa3.33□□□□□ -1.88
CD44-236ENST00000533222 TRGV1A0A0A0MS02 117 aa3.33□□□□□ -1.88
CD44-236ENST00000533222 A0A1B0GU69 56 aa3.33□□□□□ -1.88
CD44-236ENST00000533222 K7EQZ3 153 aa3.33□□□□□ -1.88
CD44-236ENST00000533222 ACYP2P14621 99 aa3.33□□□□□ -1.88
CD44-236ENST00000533222 ASCC3Q8N3C0 2202 aaKnown RBP3.32□□□□□ -1.88
CD44-236ENST00000533222 RPL37AP8A6NKH3 93 aa3.32□□□□□ -1.88
CD44-236ENST00000533222 A8MUU9 505 aa3.32□□□□□ -1.88
CD44-236ENST00000533222 ANGP03950 147 aaKnown RBP3.32□□□□□ -1.88
CD44-236ENST00000533222 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
CD44-236ENST00000533222 DEFB113Q30KQ7 82 aa3.32□□□□□ -1.88
CD44-236ENST00000533222 DEFB132Q7Z7B7 95 aa3.32□□□□□ -1.88
CD44-236ENST00000533222 Q8N377 158 aa3.32□□□□□ -1.88
CD44-236ENST00000533222 ZNRD1Q9P1U0 126 aa3.32□□□□□ -1.88
CD44-236ENST00000533222 ASXL3Q9C0F0 2248 aa3.32□□□□□ -1.88
CD44-236ENST00000533222 MED13LQ71F56 2210 aa3.31□□□□□ -1.88
CD44-236ENST00000533222 C4orf3Q8WVX3 66 aa3.31□□□□□ -1.88
CD44-236ENST00000533222 USMG5Q96IX5 58 aa3.31□□□□□ -1.88
CD44-236ENST00000533222 LINC00472Q9H8W2 130 aa3.31□□□□□ -1.88
CD44-236ENST00000533222 DHRS4-AS1Q9P1J3 65 aa3.31□□□□□ -1.88
CD44-236ENST00000533222 MINOS1-NBL1R4GNA1 71 aa3.31□□□□□ -1.88
CD44-236ENST00000533222 SORL1Q92673 2214 aa3.31□□□□□ -1.88
CD44-236ENST00000533222 IGKV3OR2-268A0A0C4DH90 116 aa3.3□□□□□ -1.88
CD44-236ENST00000533222 IGLV7-43P04211 117 aa3.3□□□□□ -1.88
CD44-236ENST00000533222 TLX1NBP0CAT3 122 aa3.3□□□□□ -1.88
CD44-236ENST00000533222 DEFB131AP59861 70 aa3.3□□□□□ -1.88
CD44-236ENST00000533222 KNL1Q8NG31 2342 aa3.3□□□□□ -1.88
CD44-236ENST00000533222 ABCA1O95477 2261 aa3.3□□□□□ -1.88
CD44-236ENST00000533222 A0A1W2PPR1 153 aa3.29□□□□□ -1.88
CD44-236ENST00000533222 C15orf56Q8N910 161 aa3.29□□□□□ -1.88
CD44-236ENST00000533222 TOMM7Q9P0U1 55 aa3.29□□□□□ -1.88
CD44-236ENST00000533222 CACNA1GO43497 2377 aa3.28□□□□□ -1.88
CD44-236ENST00000533222 A0A1B0GVX0 72 aa3.28□□□□□ -1.88
CD44-236ENST00000533222 PANO1I0J062 215 aa3.28□□□□□ -1.88
CD44-236ENST00000533222 IGKV2-24A0A0C4DH68 120 aa3.27□□□□□ -1.89
CD44-236ENST00000533222 APELAP0DMC3 54 aa3.27□□□□□ -1.89
CD44-236ENST00000533222 A0A087WTM6 91 aa3.25□□□□□ -1.89
CD44-236ENST00000533222 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
CD44-236ENST00000533222 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
CD44-236ENST00000533222 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
CD44-236ENST00000533222 LY6G6CO95867 125 aa3.24□□□□□ -1.89
CD44-236ENST00000533222 KRTAP10-5P60370 271 aa3.24□□□□□ -1.89
CD44-236ENST00000533222 PRB3Q04118 309 aaPredicted RBP3.24□□□□□ -1.89
CD44-236ENST00000533222 SDK1Q7Z5N4 2213 aa3.23□□□□□ -1.89
CD44-236ENST00000533222 CIRBP-AS1Q8TBR5 109 aa3.23□□□□□ -1.89
CD44-236ENST00000533222 DEFB104AQ8WTQ1 72 aa3.23□□□□□ -1.89
CD44-236ENST00000533222 RHPN1-AS1Q9BWJ2 59 aa3.23□□□□□ -1.89
CD44-236ENST00000533222 DOPEY2Q9Y3R5 2298 aa3.22□□□□□ -1.89
CD44-236ENST00000533222 PRB1P04280 392 aa3.22□□□□□ -1.89
CD44-236ENST00000533222 DEFB108BQ8NET1 73 aa3.22□□□□□ -1.89
CD44-236ENST00000533222 CCL19Q99731 98 aa3.22□□□□□ -1.89
CD44-236ENST00000533222 ICE1Q9Y2F5 2266 aa3.22□□□□□ -1.89
CD44-236ENST00000533222 WNK2Q9Y3S1 2297 aa3.21□□□□□ -1.9
CD44-236ENST00000533222 INSP01308 110 aa3.21□□□□□ -1.9
CD44-236ENST00000533222 PRB2P02812 416 aaPredicted RBP3.21□□□□□ -1.9
CD44-236ENST00000533222 WFDC13Q8IUB5 93 aa3.21□□□□□ -1.9
CD44-236ENST00000533222 LINC00304Q8N9R0 145 aa3.21□□□□□ -1.9
CD44-236ENST00000533222 PRO3102Q9H379 93 aa3.21□□□□□ -1.9
CD44-236ENST00000533222 C6orf48Q9UBA6 75 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 206.8 ms