RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 MEIG1Q5JSS6 88 aa15.4■□□□□ 0.06
USP48-214ENST00000532737 PLA2G2DQ9UNK4 145 aa15.4■□□□□ 0.06
USP48-214ENST00000532737 C22orf24Q9Y442 160 aa15.4■□□□□ 0.06
USP48-214ENST00000532737 NMUP48645 174 aa15.39■□□□□ 0.05
USP48-214ENST00000532737 PRR3P79522 188 aaKnown RBP15.39■□□□□ 0.05
USP48-214ENST00000532737 KRTAP11-1Q8IUC1 163 aa15.39■□□□□ 0.05
USP48-214ENST00000532737 ATOH7Q8N100 152 aa15.39■□□□□ 0.05
USP48-214ENST00000532737 HNRNPA3P51991 378 aaKnown RBP15.38■□□□□ 0.05
USP48-214ENST00000532737 IGKV2D-26A0A0A0MRZ7 120 aa15.37■□□□□ 0.05
USP48-214ENST00000532737 LINC00587B1AMM8 73 aa15.35■□□□□ 0.05
USP48-214ENST00000532737 MIR7-3HGQ8N6C7 128 aa15.35■□□□□ 0.05
USP48-214ENST00000532737 PSORS1C2Q9UIG4 136 aa15.35■□□□□ 0.05
USP48-214ENST00000532737 IGLV5-37A0A075B6J1 123 aa15.33■□□□□ 0.04
USP48-214ENST00000532737 AKR1D1P51857 326 aa15.33■□□□□ 0.04
USP48-214ENST00000532737 ANKRD39Q53RE8 183 aa15.33■□□□□ 0.04
USP48-214ENST00000532737 Q8NDZ9 215 aa15.33■□□□□ 0.04
USP48-214ENST00000532737 TP73-AS1Q9UF72 201 aa15.33■□□□□ 0.04
USP48-214ENST00000532737 UBE2BP63146 152 aa15.32■□□□□ 0.04
USP48-214ENST00000532737 LBHQ53QV2 105 aaPredicted RBP15.32■□□□□ 0.04
USP48-214ENST00000532737 MRPL55Q7Z7F7 128 aaKnown RBP15.32■□□□□ 0.04
USP48-214ENST00000532737 VPREB1P12018 145 aa15.31■□□□□ 0.04
USP48-214ENST00000532737 TTTY13Q9BZ97 58 aa15.31■□□□□ 0.04
USP48-214ENST00000532737 A0A0J9YXY3 114 aa15.3■□□□□ 0.04
USP48-214ENST00000532737 DAND5Q8N907 189 aa15.29■□□□□ 0.04
USP48-214ENST00000532737 NKAPP1Q8N9T2 125 aa15.29■□□□□ 0.04
USP48-214ENST00000532737 LINC00167Q96N53 147 aa15.29■□□□□ 0.04
USP48-214ENST00000532737 GAGE10A6NGK3 116 aa15.28■□□□□ 0.04
USP48-214ENST00000532737 ZNF815PA8K554 130 aa15.27■□□□□ 0.04
USP48-214ENST00000532737 RPL24P83731 157 aaKnown RBP15.27■□□□□ 0.04
USP48-214ENST00000532737 C1orf137Q5JT78 98 aa15.27■□□□□ 0.04
USP48-214ENST00000532737 PKHD1L1Q86WI1 4243 aa15.26■□□□□ 0.03
USP48-214ENST00000532737 ADAMTSL4-AS1Q5T5F5 129 aa15.25■□□□□ 0.03
USP48-214ENST00000532737 RPL37AP8A6NKH3 93 aa15.24■□□□□ 0.03
USP48-214ENST00000532737 SCGB1D1O95968 90 aa15.24■□□□□ 0.03
USP48-214ENST00000532737 BOD1L2Q8IYS8 172 aa15.24■□□□□ 0.03
USP48-214ENST00000532737 TMA7Q9Y2S6 64 aaKnown RBP15.24■□□□□ 0.03
USP48-214ENST00000532737 SRSF9Q13242 221 aaKnown RBP eCLIP15.23■□□□□ 0.03
USP48-214ENST00000532737 LITAFQ99732 161 aa15.22■□□□□ 0.03
USP48-214ENST00000532737 LOC107984156A0A0G2JMH3 177 aa15.21■□□□□ 0.03
USP48-214ENST00000532737 ARL17AQ8IVW1 177 aa15.21■□□□□ 0.03
USP48-214ENST00000532737 IGLV7-43P04211 117 aa15.2■□□□□ 0.02
USP48-214ENST00000532737 PCP2Q8IVA1 136 aa15.2■□□□□ 0.02
USP48-214ENST00000532737 J3QL48 77 aa15.19■□□□□ 0.02
USP48-214ENST00000532737 TIMM17BO60830 172 aa15.19■□□□□ 0.02
USP48-214ENST00000532737 SOSTDC1Q6X4U4 206 aa15.18■□□□□ 0.02
USP48-214ENST00000532737 IGKV2-28A0A075B6P5 120 aa15.17■□□□□ 0.02
USP48-214ENST00000532737 HSBP1L1C9JCN9 74 aa15.17■□□□□ 0.02
USP48-214ENST00000532737 EIF4EBP3O60516 100 aaPredicted RBP15.17■□□□□ 0.02
USP48-214ENST00000532737 IGKV2D-28P01615 120 aa15.17■□□□□ 0.02
USP48-214ENST00000532737 SPINK6Q6UWN8 80 aa15.17■□□□□ 0.02
USP48-214ENST00000532737 IGLV1-50A0A075B6I6 118 aa15.16■□□□□ 0.02
USP48-214ENST00000532737 M0R378 163 aa15.16■□□□□ 0.02
USP48-214ENST00000532737 NPC2P61916 151 aa15.16■□□□□ 0.02
USP48-214ENST00000532737 KRTAP29-1A8MX34 341 aaPredicted RBP15.15■□□□□ 0.02
USP48-214ENST00000532737 MIEN1Q9BRT3 115 aa15.15■□□□□ 0.02
USP48-214ENST00000532737 NCR3O14931 201 aa15.14■□□□□ 0.01
USP48-214ENST00000532737 LRP1Q07954 4544 aaKnown RBP15.13■□□□□ 0.01
USP48-214ENST00000532737 SCGB1D4Q6XE38 83 aa15.13■□□□□ 0.01
USP48-214ENST00000532737 LINC00308Q8TCZ7 52 aa15.12■□□□□ 0.01
USP48-214ENST00000532737 BCE1O60756 84 aa15.11■□□□□ 0.01
USP48-214ENST00000532737 JOSD1Q15040 202 aaPredicted RBP15.1■□□□□ 0.01
USP48-214ENST00000532737 FAT3Q8TDW7 4589 aa15.1■□□□□ 0.01
USP48-214ENST00000532737 TMEM238C9JI98 176 aa15.09■□□□□ 0.01
USP48-214ENST00000532737 NDUFC2O95298 119 aa15.08■□□□□ 0
USP48-214ENST00000532737 OXTP01178 125 aa15.07■□□□□ 0
USP48-214ENST00000532737 TMEM126AQ9H061 195 aa15.07■□□□□ 0
USP48-214ENST00000532737 ZNF861PO60384 105 aa15.06■□□□□ 0
USP48-214ENST00000532737 REG3GQ6UW15 175 aa15.06■□□□□ 0
USP48-214ENST00000532737 SPANXDQ9BXN6 97 aa15.06■□□□□ 0
USP48-214ENST00000532737 SPANXB1Q9NS25 103 aaPredicted RBP15.06■□□□□ 0
USP48-214ENST00000532737 SPANXCQ9NY87 97 aa15.06■□□□□ 0
USP48-214ENST00000532737 TRBV10-3A0A0K0K1G6 114 aa15.05■□□□□ -0
USP48-214ENST00000532737 TRBV10-2A0A0K0K1G8 114 aa15.05■□□□□ -0
USP48-214ENST00000532737 DIRC1Q969H9 104 aa15.05■□□□□ -0
USP48-214ENST00000532737 H0Y9J4 135 aa15.03■□□□□ -0
USP48-214ENST00000532737 KRTAP13-1Q8IUC0 172 aa15.02■□□□□ -0
USP48-214ENST00000532737 RPL28P46779 137 aaKnown RBP15.01□□□□□ -0.01
USP48-214ENST00000532737 KCNQ1DNQ9H478 68 aa15.01□□□□□ -0.01
USP48-214ENST00000532737 DDTP30046 118 aa15□□□□□ -0.01
USP48-214ENST00000532737 UBE2AP49459 152 aa15□□□□□ -0.01
USP48-214ENST00000532737 PYY3Q5JQD4 70 aa15□□□□□ -0.01
USP48-214ENST00000532737 PAM16Q9Y3D7 125 aa15□□□□□ -0.01
USP48-214ENST00000532737 PRYO14603 147 aa14.99□□□□□ -0.01
USP48-214ENST00000532737 COX8AP10176 69 aa14.99□□□□□ -0.01
USP48-214ENST00000532737 Q6ZVH6 145 aa14.99□□□□□ -0.01
USP48-214ENST00000532737 VAMP8Q9BV40 100 aa14.99□□□□□ -0.01
USP48-214ENST00000532737 IGLV6-57P01721 117 aa14.98□□□□□ -0.01
USP48-214ENST00000532737 IFITM1P13164 125 aa14.98□□□□□ -0.01
USP48-214ENST00000532737 SPATA45Q537H7 98 aa14.98□□□□□ -0.01
USP48-214ENST00000532737 FAM19A1Q7Z5A9 133 aa14.98□□□□□ -0.01
USP48-214ENST00000532737 PRLHP81277 87 aa14.97□□□□□ -0.01
USP48-214ENST00000532737 MUSTN1Q8IVN3 82 aa14.97□□□□□ -0.01
USP48-214ENST00000532737 LINC01600Q96MT4 127 aa14.97□□□□□ -0.01
USP48-214ENST00000532737 HMCN2Q8NDA2 5059 aa14.96□□□□□ -0.01
USP48-214ENST00000532737 SPRR1AP35321 89 aa14.96□□□□□ -0.01
USP48-214ENST00000532737 S100A7L2Q5SY68 101 aa14.96□□□□□ -0.01
USP48-214ENST00000532737 MT1HL1P0DM35 61 aa14.95□□□□□ -0.02
USP48-214ENST00000532737 C14orf144Q96I85 54 aa14.95□□□□□ -0.02
USP48-214ENST00000532737 PPDPFQ9H3Y8 114 aa14.95□□□□□ -0.02
USP48-214ENST00000532737 DLEU1O43261 78 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms