RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 UBE2BP63146 152 aa10.73□□□□□ -0.69
SMG1-203ENST00000532700 ZNF625Q96I27 306 aaPredicted RBP10.73□□□□□ -0.69
SMG1-203ENST00000532700 ERG28Q9UKR5 140 aa10.73□□□□□ -0.69
SMG1-203ENST00000532700 PFN2P35080 140 aa10.72□□□□□ -0.69
SMG1-203ENST00000532700 C22orf24Q9Y442 160 aa10.72□□□□□ -0.69
SMG1-203ENST00000532700 LEPROTO15243 131 aa10.71□□□□□ -0.69
SMG1-203ENST00000532700 DIRC1Q969H9 104 aa10.71□□□□□ -0.69
SMG1-203ENST00000532700 PLEKHB2Q96CS7 222 aa10.71□□□□□ -0.69
SMG1-203ENST00000532700 LINC01545Q5VT33 79 aa10.7□□□□□ -0.7
SMG1-203ENST00000532700 MYMXA0A1B0GTQ4 84 aa10.69□□□□□ -0.7
SMG1-203ENST00000532700 C3orf79P0CE67 100 aa10.69□□□□□ -0.7
SMG1-203ENST00000532700 HERV-K104P63124 156 aa10.69□□□□□ -0.7
SMG1-203ENST00000532700 NDUFA12Q9UI09 145 aa10.69□□□□□ -0.7
SMG1-203ENST00000532700 LINC00587B1AMM8 73 aa10.68□□□□□ -0.7
SMG1-203ENST00000532700 S100A6P06703 90 aa10.68□□□□□ -0.7
SMG1-203ENST00000532700 KRTDAPP60985 99 aa10.68□□□□□ -0.7
SMG1-203ENST00000532700 J3QQQ9 107 aa10.67□□□□□ -0.7
SMG1-203ENST00000532700 LINC00158P58513 81 aa10.67□□□□□ -0.7
SMG1-203ENST00000532700 LBHQ53QV2 105 aaPredicted RBP10.67□□□□□ -0.7
SMG1-203ENST00000532700 C20orf202A1L168 122 aa10.66□□□□□ -0.7
SMG1-203ENST00000532700 LGALS3P17931 250 aaKnown RBP10.66□□□□□ -0.7
SMG1-203ENST00000532700 S100A2P29034 98 aa10.66□□□□□ -0.7
SMG1-203ENST00000532700 NMUP48645 174 aa10.66□□□□□ -0.7
SMG1-203ENST00000532700 LPAP08519 4548 aa10.66□□□□□ -0.7
SMG1-203ENST00000532700 MEIG1Q5JSS6 88 aa10.65□□□□□ -0.7
SMG1-203ENST00000532700 SND1-IT1Q9HBX3 110 aa10.65□□□□□ -0.7
SMG1-203ENST00000532700 TP73-AS1Q9UF72 201 aa10.65□□□□□ -0.7
SMG1-203ENST00000532700 AKR1D1P51857 326 aa10.64□□□□□ -0.71
SMG1-203ENST00000532700 MRPL55Q7Z7F7 128 aaKnown RBP10.64□□□□□ -0.71
SMG1-203ENST00000532700 HIST3H2BBQ8N257 126 aa10.64□□□□□ -0.71
SMG1-203ENST00000532700 GAGE10A6NGK3 116 aa10.63□□□□□ -0.71
SMG1-203ENST00000532700 RPL37AP8A6NKH3 93 aa10.63□□□□□ -0.71
SMG1-203ENST00000532700 E9PLD3 99 aa10.63□□□□□ -0.71
SMG1-203ENST00000532700 TSPEAR-AS2P59090 65 aa10.63□□□□□ -0.71
SMG1-203ENST00000532700 LINC00167Q96N53 147 aa10.63□□□□□ -0.71
SMG1-203ENST00000532700 ZNF861PO60384 105 aa10.62□□□□□ -0.71
SMG1-203ENST00000532700 SMIM13P0DJ93 91 aa10.62□□□□□ -0.71
SMG1-203ENST00000532700 RPL24P83731 157 aaKnown RBP10.62□□□□□ -0.71
SMG1-203ENST00000532700 NKAPP1Q8N9T2 125 aa10.62□□□□□ -0.71
SMG1-203ENST00000532700 IGLV5-37A0A075B6J1 123 aa10.61□□□□□ -0.71
SMG1-203ENST00000532700 A0A0U1RRA0 63 aa10.61□□□□□ -0.71
SMG1-203ENST00000532700 Q8NDZ9 215 aa10.61□□□□□ -0.71
SMG1-203ENST00000532700 RNF213Q63HN8 5207 aa10.61□□□□□ -0.71
SMG1-203ENST00000532700 HIST1H2BLQ99880 126 aa10.6□□□□□ -0.71
SMG1-203ENST00000532700 IGLV1-50A0A075B6I6 118 aa10.58□□□□□ -0.72
SMG1-203ENST00000532700 SNRPEP62304 92 aaKnown RBP10.58□□□□□ -0.72
SMG1-203ENST00000532700 MIR7-3HGQ8N6C7 128 aa10.58□□□□□ -0.72
SMG1-203ENST00000532700 A0A087X002 238 aa10.57□□□□□ -0.72
SMG1-203ENST00000532700 BCE1O60756 84 aa10.57□□□□□ -0.72
SMG1-203ENST00000532700 VPREB1P12018 145 aa10.56□□□□□ -0.72
SMG1-203ENST00000532700 KRTAP13-1Q8IUC0 172 aa10.56□□□□□ -0.72
SMG1-203ENST00000532700 ANAPC11Q9NYG5 84 aa10.55□□□□□ -0.72
SMG1-203ENST00000532700 C5orf52A6NGY3 159 aa10.54□□□□□ -0.72
SMG1-203ENST00000532700 IGKV2-28A0A075B6P5 120 aa10.53□□□□□ -0.72
SMG1-203ENST00000532700 A0A0J9YXY3 114 aa10.53□□□□□ -0.72
SMG1-203ENST00000532700 IGKV2D-28P01615 120 aa10.53□□□□□ -0.72
SMG1-203ENST00000532700 BOD1L2Q8IYS8 172 aa10.53□□□□□ -0.72
SMG1-203ENST00000532700 ATOH7Q8N100 152 aa10.52□□□□□ -0.73
SMG1-203ENST00000532700 IGKV2D-26A0A0A0MRZ7 120 aa10.51□□□□□ -0.73
SMG1-203ENST00000532700 ZNF815PA8K554 130 aa10.51□□□□□ -0.73
SMG1-203ENST00000532700 DAND5Q8N907 189 aa10.51□□□□□ -0.73
SMG1-203ENST00000532700 MIEN1Q9BRT3 115 aa10.51□□□□□ -0.73
SMG1-203ENST00000532700 LOC107984156A0A0G2JMH3 177 aa10.5□□□□□ -0.73
SMG1-203ENST00000532700 TMEM238C9JI98 176 aa10.5□□□□□ -0.73
SMG1-203ENST00000532700 M0R378 163 aa10.5□□□□□ -0.73
SMG1-203ENST00000532700 RPL28P46779 137 aaKnown RBP10.5□□□□□ -0.73
SMG1-203ENST00000532700 ARL17AQ8IVW1 177 aa10.5□□□□□ -0.73
SMG1-203ENST00000532700 KRTAP13-2Q52LG2 175 aa10.49□□□□□ -0.73
SMG1-203ENST00000532700 HSBP1L1C9JCN9 74 aa10.48□□□□□ -0.73
SMG1-203ENST00000532700 TIMM17BO60830 172 aa10.48□□□□□ -0.73
SMG1-203ENST00000532700 RPL13AP40429 203 aaKnown RBP10.48□□□□□ -0.73
SMG1-203ENST00000532700 PRLHP81277 87 aa10.48□□□□□ -0.73
SMG1-203ENST00000532700 ANKRD39Q53RE8 183 aa10.48□□□□□ -0.73
SMG1-203ENST00000532700 LCE2DQ5TA82 110 aaPredicted RBP10.47□□□□□ -0.73
SMG1-203ENST00000532700 SCGB1D1O95968 90 aa10.46□□□□□ -0.73
SMG1-203ENST00000532700 ADAMTSL4-AS1Q5T5F5 129 aa10.46□□□□□ -0.73
SMG1-203ENST00000532700 TTTY13Q9BZ97 58 aa10.46□□□□□ -0.73
SMG1-203ENST00000532700 NCR3O14931 201 aa10.45□□□□□ -0.74
SMG1-203ENST00000532700 TSPAN13O95857 204 aa10.45□□□□□ -0.74
SMG1-203ENST00000532700 SCGB1D4Q6XE38 83 aa10.45□□□□□ -0.74
SMG1-203ENST00000532700 TMEM126AQ9H061 195 aa10.45□□□□□ -0.74
SMG1-203ENST00000532700 NDUFC2O95298 119 aa10.44□□□□□ -0.74
SMG1-203ENST00000532700 UBE2AP49459 152 aa10.44□□□□□ -0.74
SMG1-203ENST00000532700 TRBV10-2A0A0K0K1G8 114 aa10.43□□□□□ -0.74
SMG1-203ENST00000532700 S100A12P80511 92 aa10.43□□□□□ -0.74
SMG1-203ENST00000532700 LITAFQ99732 161 aa10.43□□□□□ -0.74
SMG1-203ENST00000532700 NPC2P61916 151 aa10.42□□□□□ -0.74
SMG1-203ENST00000532700 SPANXB1Q9NS25 103 aaPredicted RBP10.42□□□□□ -0.74
SMG1-203ENST00000532700 PRR4Q16378 134 aa10.41□□□□□ -0.74
SMG1-203ENST00000532700 FAM19A1Q7Z5A9 133 aa10.41□□□□□ -0.74
SMG1-203ENST00000532700 PCP2Q8IVA1 136 aa10.41□□□□□ -0.74
SMG1-203ENST00000532700 LINC00308Q8TCZ7 52 aa10.41□□□□□ -0.74
SMG1-203ENST00000532700 CRYGAP11844 174 aa10.4□□□□□ -0.74
SMG1-203ENST00000532700 SOSTDC1Q6X4U4 206 aa10.4□□□□□ -0.74
SMG1-203ENST00000532700 TYMSOSQ8TAI1 123 aa10.4□□□□□ -0.74
SMG1-203ENST00000532700 COPS9Q8WXC6 57 aa10.4□□□□□ -0.74
SMG1-203ENST00000532700 PRYO14603 147 aa10.39□□□□□ -0.75
SMG1-203ENST00000532700 TRBV10-3A0A0K0K1G6 114 aa10.38□□□□□ -0.75
SMG1-203ENST00000532700 DDTP30046 118 aa10.38□□□□□ -0.75
SMG1-203ENST00000532700 S100A7L2Q5SY68 101 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 210.5 ms