RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 PMCHL1Q16048 86 aa9.09□□□□□ -0.95
CHMP4A-204ENST00000530996 ZNF706Q9Y5V0 76 aaPredicted RBP9.09□□□□□ -0.95
CHMP4A-204ENST00000530996 A0A0U1RRA0 63 aa9.08□□□□□ -0.96
CHMP4A-204ENST00000530996 C11orf86A6NJI1 115 aa9.08□□□□□ -0.96
CHMP4A-204ENST00000530996 CTAG1AP78358 180 aa9.08□□□□□ -0.96
CHMP4A-204ENST00000530996 C4orf48Q5BLP8 95 aa9.08□□□□□ -0.96
CHMP4A-204ENST00000530996 A0A096LNJ9 63 aa9.07□□□□□ -0.96
CHMP4A-204ENST00000530996 BAGE3Q86Y29 109 aa9.07□□□□□ -0.96
CHMP4A-204ENST00000530996 SEC11CQ9BY50 192 aa9.07□□□□□ -0.96
CHMP4A-204ENST00000530996 ATP6V1G1O75348 118 aa9.06□□□□□ -0.96
CHMP4A-204ENST00000530996 SPAG11AQ6PDA7 123 aa9.06□□□□□ -0.96
CHMP4A-204ENST00000530996 SPRR4Q96PI1 79 aa9.06□□□□□ -0.96
CHMP4A-204ENST00000530996 LINC00337Q8N6G1 96 aa9.05□□□□□ -0.96
CHMP4A-204ENST00000530996 RPS10P5Q9NQ39 176 aa9.05□□□□□ -0.96
CHMP4A-204ENST00000530996 NCR3O14931 201 aa9.04□□□□□ -0.96
CHMP4A-204ENST00000530996 LINC00614P0C842 121 aa9.04□□□□□ -0.96
CHMP4A-204ENST00000530996 C18orf32Q8TCD1 76 aa9.04□□□□□ -0.96
CHMP4A-204ENST00000530996 MEIG1Q5JSS6 88 aa9.03□□□□□ -0.96
CHMP4A-204ENST00000530996 FP248Q71RG6 208 aaPredicted RBP9.03□□□□□ -0.96
CHMP4A-204ENST00000530996 DAND5Q8N907 189 aa9.03□□□□□ -0.96
CHMP4A-204ENST00000530996 Q8NBF4 154 aa9.03□□□□□ -0.96
CHMP4A-204ENST00000530996 CHTOPQ9Y3Y2 248 aaKnown RBP9.03□□□□□ -0.96
CHMP4A-204ENST00000530996 TRAPPC1Q9Y5R8 145 aa9.03□□□□□ -0.96
CHMP4A-204ENST00000530996 PRYO14603 147 aa9.02□□□□□ -0.97
CHMP4A-204ENST00000530996 RHEBQ15382 184 aa9.02□□□□□ -0.97
CHMP4A-204ENST00000530996 BOD1L2Q8IYS8 172 aa9.02□□□□□ -0.97
CHMP4A-204ENST00000530996 ETDCA0A1B0GVM5 59 aa9.01□□□□□ -0.97
CHMP4A-204ENST00000530996 COMMD7Q86VX2 200 aa9.01□□□□□ -0.97
CHMP4A-204ENST00000530996 URB1-AS1Q96HZ7 61 aa9.01□□□□□ -0.97
CHMP4A-204ENST00000530996 SMIM13P0DJ93 91 aa8.99□□□□□ -0.97
CHMP4A-204ENST00000530996 MUC17Q685J3 4493 aa8.99□□□□□ -0.97
CHMP4A-204ENST00000530996 KRTAP9-6A0A140TA67 174 aa8.98□□□□□ -0.97
CHMP4A-204ENST00000530996 NDUFA12Q9UI09 145 aa8.98□□□□□ -0.97
CHMP4A-204ENST00000530996 TMEM223A0PJW6 202 aa8.97□□□□□ -0.97
CHMP4A-204ENST00000530996 S100A12P80511 92 aa8.97□□□□□ -0.97
CHMP4A-204ENST00000530996 MIR7-3HGQ8N6C7 128 aa8.97□□□□□ -0.97
CHMP4A-204ENST00000530996 KRTAP13-3Q3SY46 172 aa8.96□□□□□ -0.98
CHMP4A-204ENST00000530996 SMCR5Q8TEV8 140 aa8.96□□□□□ -0.98
CHMP4A-204ENST00000530996 IGLV9-49A0A0B4J1Y8 123 aa8.95□□□□□ -0.98
CHMP4A-204ENST00000530996 SPINK1P00995 79 aa8.95□□□□□ -0.98
CHMP4A-204ENST00000530996 MOBPQ13875 183 aa8.95□□□□□ -0.98
CHMP4A-204ENST00000530996 GAGE2AQ6NT46 116 aa8.95□□□□□ -0.98
CHMP4A-204ENST00000530996 TRBV10-3A0A0K0K1G6 114 aa8.94□□□□□ -0.98
CHMP4A-204ENST00000530996 HERV-K104P63124 156 aa8.94□□□□□ -0.98
CHMP4A-204ENST00000530996 IFI27L1Q96BM0 104 aa8.94□□□□□ -0.98
CHMP4A-204ENST00000530996 KCNQ1DNQ9H478 68 aa8.94□□□□□ -0.98
CHMP4A-204ENST00000530996 TRAV12-1A0A0B4J245 112 aa8.93□□□□□ -0.98
CHMP4A-204ENST00000530996 LINC01547P58512 204 aaPredicted RBP8.93□□□□□ -0.98
CHMP4A-204ENST00000530996 IFITM2Q01629 132 aa8.93□□□□□ -0.98
CHMP4A-204ENST00000530996 FAM19A2Q8N3H0 131 aa8.93□□□□□ -0.98
CHMP4A-204ENST00000530996 H0Y8G0 127 aa8.92□□□□□ -0.98
CHMP4A-204ENST00000530996 SPRR1AP35321 89 aa8.92□□□□□ -0.98
CHMP4A-204ENST00000530996 SEC61BP60468 96 aaKnown RBP8.92□□□□□ -0.98
CHMP4A-204ENST00000530996 ASB16-AS1Q495Z4 193 aa8.92□□□□□ -0.98
CHMP4A-204ENST00000530996 MAP1LC3CQ9BXW4 147 aa8.92□□□□□ -0.98
CHMP4A-204ENST00000530996 LINC00587B1AMM8 73 aa8.91□□□□□ -0.98
CHMP4A-204ENST00000530996 LINC00483Q53H64 154 aa8.91□□□□□ -0.98
CHMP4A-204ENST00000530996 C10orf91Q5T1B1 145 aa8.91□□□□□ -0.98
CHMP4A-204ENST00000530996 MYMXA0A1B0GTQ4 84 aa8.9□□□□□ -0.98
CHMP4A-204ENST00000530996 KRTAP4-16G5E9R7 235 aaPredicted RBP8.89□□□□□ -0.99
CHMP4A-204ENST00000530996 DDTP30046 118 aa8.89□□□□□ -0.99
CHMP4A-204ENST00000530996 CHCHD1Q96BP2 118 aaKnown RBP8.89□□□□□ -0.99
CHMP4A-204ENST00000530996 APOC3P02656 99 aa8.88□□□□□ -0.99
CHMP4A-204ENST00000530996 B5MCH6 92 aa8.87□□□□□ -0.99
CHMP4A-204ENST00000530996 NDUFA5Q16718 116 aa8.87□□□□□ -0.99
CHMP4A-204ENST00000530996 C9orf153Q5TBE3 101 aa8.87□□□□□ -0.99
CHMP4A-204ENST00000530996 MIEN1Q9BRT3 115 aa8.87□□□□□ -0.99
CHMP4A-204ENST00000530996 HSBP1O75506 76 aa8.86□□□□□ -0.99
CHMP4A-204ENST00000530996 ERC2-IT1O76042 136 aa8.86□□□□□ -0.99
CHMP4A-204ENST00000530996 SLC25A20O43772 301 aa8.85□□□□□ -0.99
CHMP4A-204ENST00000530996 SNAPINO95295 136 aa8.85□□□□□ -0.99
CHMP4A-204ENST00000530996 RPS29P62273 56 aaKnown RBP8.85□□□□□ -0.99
CHMP4A-204ENST00000530996 S100A7L2Q5SY68 101 aa8.85□□□□□ -0.99
CHMP4A-204ENST00000530996 Q8N377 158 aa8.85□□□□□ -0.99
CHMP4A-204ENST00000530996 TSPEAR-AS2P59090 65 aa8.84□□□□□ -0.99
CHMP4A-204ENST00000530996 Q6ZRX8 168 aa8.84□□□□□ -0.99
CHMP4A-204ENST00000530996 SSBP3-AS1Q7Z2R9 100 aa8.84□□□□□ -0.99
CHMP4A-204ENST00000530996 SPANXB1Q9NS25 103 aaPredicted RBP8.84□□□□□ -0.99
CHMP4A-204ENST00000530996 SVBPQ8N300 66 aa8.83□□□□□ -1
CHMP4A-204ENST00000530996 Q9BRP9 147 aa8.83□□□□□ -1
CHMP4A-204ENST00000530996 KRTAP4-1Q9BYQ7 146 aa8.83□□□□□ -1
CHMP4A-204ENST00000530996 TRBV10-2A0A0K0K1G8 114 aa8.82□□□□□ -1
CHMP4A-204ENST00000530996 LEPROTO15243 131 aa8.82□□□□□ -1
CHMP4A-204ENST00000530996 JOSD1Q15040 202 aaPredicted RBP8.82□□□□□ -1
CHMP4A-204ENST00000530996 TRAV23DV6A0A075B6W5 121 aa8.81□□□□□ -1
CHMP4A-204ENST00000530996 HERVK_113P61574 105 aa8.81□□□□□ -1
CHMP4A-204ENST00000530996 LGALS3P17931 250 aaKnown RBP8.8□□□□□ -1
CHMP4A-204ENST00000530996 PLNP26678 52 aa8.8□□□□□ -1
CHMP4A-204ENST00000530996 J3QQQ9 107 aa8.79□□□□□ -1
CHMP4A-204ENST00000530996 NPC2P61916 151 aa8.79□□□□□ -1
CHMP4A-204ENST00000530996 LEPROTL1O95214 131 aa8.78□□□□□ -1
CHMP4A-204ENST00000530996 XP32Q5T750 250 aa8.78□□□□□ -1
CHMP4A-204ENST00000530996 NMUP48645 174 aa8.77□□□□□ -1.01
CHMP4A-204ENST00000530996 LOC107984156A0A0G2JMH3 177 aa8.76□□□□□ -1.01
CHMP4A-204ENST00000530996 ZNF73O43830 326 aaPredicted RBP8.76□□□□□ -1.01
CHMP4A-204ENST00000530996 DPM2O94777 84 aa8.76□□□□□ -1.01
CHMP4A-204ENST00000530996 IGLV6-57P01721 117 aa8.76□□□□□ -1.01
CHMP4A-204ENST00000530996 ARL17AQ8IVW1 177 aa8.76□□□□□ -1.01
CHMP4A-204ENST00000530996 PMCHL2Q9BQD1 86 aa8.76□□□□□ -1.01
CHMP4A-204ENST00000530996 NDUFC2O95298 119 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms