RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 HERVK_113P61574 105 aa11.67□□□□□ -0.54
GMDS-208ENST00000530927 C6orf226Q5I0X4 101 aa11.67□□□□□ -0.54
GMDS-208ENST00000530927 Q8IZM0 81 aa11.67□□□□□ -0.54
GMDS-208ENST00000530927 DLEU1O43261 78 aa11.66□□□□□ -0.54
GMDS-208ENST00000530927 DMBT1Q9UGM3 2413 aaPredicted RBP11.65□□□□□ -0.54
GMDS-208ENST00000530927 TRBV30A0A0K0K1B3 111 aa11.65□□□□□ -0.54
GMDS-208ENST00000530927 CKS1BP61024 79 aa11.65□□□□□ -0.54
GMDS-208ENST00000530927 PRR3P79522 188 aaKnown RBP11.65□□□□□ -0.54
GMDS-208ENST00000530927 PHF5AQ7RTV0 110 aaKnown RBP11.65□□□□□ -0.54
GMDS-208ENST00000530927 KRTAP7-1Q8IUC3 87 aa11.65□□□□□ -0.54
GMDS-208ENST00000530927 COX7B2Q8TF08 81 aa11.64□□□□□ -0.55
GMDS-208ENST00000530927 C9orf129Q5T035 196 aaKnown RBP11.62□□□□□ -0.55
GMDS-208ENST00000530927 FAM19A5Q7Z5A7 132 aaPredicted RBP11.62□□□□□ -0.55
GMDS-208ENST00000530927 KRTAP29-1A8MX34 341 aaPredicted RBP11.61□□□□□ -0.55
GMDS-208ENST00000530927 NDUFC2-KCTD14E9PQ53 114 aa11.61□□□□□ -0.55
GMDS-208ENST00000530927 J3QL48 77 aa11.61□□□□□ -0.55
GMDS-208ENST00000530927 E9PLD3 99 aa11.6□□□□□ -0.55
GMDS-208ENST00000530927 LEPROTO15243 131 aa11.6□□□□□ -0.55
GMDS-208ENST00000530927 CXCL5P42830 114 aa11.6□□□□□ -0.55
GMDS-208ENST00000530927 KRTAP11-1Q8IUC1 163 aa11.6□□□□□ -0.55
GMDS-208ENST00000530927 PLEKHB2Q96CS7 222 aa11.6□□□□□ -0.55
GMDS-208ENST00000530927 BATFQ16520 125 aa11.6□□□□□ -0.55
GMDS-208ENST00000530927 BOD1L2Q8IYS8 172 aa11.6□□□□□ -0.55
GMDS-208ENST00000530927 SFTA2Q6UW10 78 aa11.58□□□□□ -0.56
GMDS-208ENST00000530927 XAGE1AQ9HD64 81 aa11.58□□□□□ -0.56
GMDS-208ENST00000530927 J3QQQ9 107 aa11.57□□□□□ -0.56
GMDS-208ENST00000530927 HINT1P49773 126 aaPredicted RBP11.56□□□□□ -0.56
GMDS-208ENST00000530927 ANKRD39Q53RE8 183 aa11.56□□□□□ -0.56
GMDS-208ENST00000530927 PSORS1C2Q9UIG4 136 aa11.56□□□□□ -0.56
GMDS-208ENST00000530927 LGALS3P17931 250 aaKnown RBP11.55□□□□□ -0.56
GMDS-208ENST00000530927 SERTAD4-AS1Q5TG53 156 aa11.55□□□□□ -0.56
GMDS-208ENST00000530927 TSPEAR-AS2P59090 65 aa11.54□□□□□ -0.56
GMDS-208ENST00000530927 BVES-AS1Q5T3Y7 98 aa11.54□□□□□ -0.56
GMDS-208ENST00000530927 C2orf91Q6ZV80 131 aa11.54□□□□□ -0.56
GMDS-208ENST00000530927 HIGD1BQ9P298 99 aa11.54□□□□□ -0.56
GMDS-208ENST00000530927 M0QXV9 152 aa11.53□□□□□ -0.56
GMDS-208ENST00000530927 NMUP48645 174 aa11.53□□□□□ -0.56
GMDS-208ENST00000530927 ZNF625Q96I27 306 aaPredicted RBP11.53□□□□□ -0.56
GMDS-208ENST00000530927 NDUFA12Q9UI09 145 aa11.53□□□□□ -0.56
GMDS-208ENST00000530927 IGKV2D-26A0A0A0MRZ7 120 aa11.52□□□□□ -0.56
GMDS-208ENST00000530927 MYMXA0A1B0GTQ4 84 aa11.52□□□□□ -0.56
GMDS-208ENST00000530927 OXTP01178 125 aa11.52□□□□□ -0.56
GMDS-208ENST00000530927 HERV-K104P63124 156 aa11.52□□□□□ -0.57
GMDS-208ENST00000530927 HSD52Q0P140 79 aa11.52□□□□□ -0.57
GMDS-208ENST00000530927 C1orf137Q5JT78 98 aa11.51□□□□□ -0.57
GMDS-208ENST00000530927 SRSF9Q13242 221 aaKnown RBP eCLIP11.5□□□□□ -0.576e-7■■■□□ 15.3
GMDS-208ENST00000530927 MT1HL1P0DM35 61 aa11.49□□□□□ -0.57
GMDS-208ENST00000530927 TNXBP22105 4242 aa11.48□□□□□ -0.57
GMDS-208ENST00000530927 PFN2P35080 140 aa11.48□□□□□ -0.57
GMDS-208ENST00000530927 A6NDN8 102 aa11.47□□□□□ -0.57
GMDS-208ENST00000530927 C22orf24Q9Y442 160 aa11.47□□□□□ -0.57
GMDS-208ENST00000530927 ZNF815PA8K554 130 aa11.46□□□□□ -0.57
GMDS-208ENST00000530927 UBE2BP63146 152 aa11.46□□□□□ -0.57
GMDS-208ENST00000530927 COX17Q14061 63 aa11.46□□□□□ -0.57
GMDS-208ENST00000530927 ERG28Q9UKR5 140 aa11.46□□□□□ -0.57
GMDS-208ENST00000530927 TAL2Q16559 108 aa11.45□□□□□ -0.58
GMDS-208ENST00000530927 SPINK6Q6UWN8 80 aa11.45□□□□□ -0.58
GMDS-208ENST00000530927 PCP2Q8IVA1 136 aa11.45□□□□□ -0.58
GMDS-208ENST00000530927 TTTY13Q9BZ97 58 aa11.45□□□□□ -0.58
GMDS-208ENST00000530927 TAX1BP3O14907 124 aa11.44□□□□□ -0.58
GMDS-208ENST00000530927 MEIG1Q5JSS6 88 aa11.44□□□□□ -0.58
GMDS-208ENST00000530927 A0A0J9YXY3 114 aa11.43□□□□□ -0.58
GMDS-208ENST00000530927 UBE2V1Q13404 147 aa11.43□□□□□ -0.58
GMDS-208ENST00000530927 IGLV7-43P04211 117 aa11.43□□□□□ -0.58
GMDS-208ENST00000530927 LINC00158P58513 81 aa11.42□□□□□ -0.58
GMDS-208ENST00000530927 TP73-AS1Q9UF72 201 aa11.42□□□□□ -0.58
GMDS-208ENST00000530927 SMIM13P0DJ93 91 aa11.41□□□□□ -0.58
GMDS-208ENST00000530927 A0A0U1RRA0 63 aa11.4□□□□□ -0.58
GMDS-208ENST00000530927 GAGE10A6NGK3 116 aa11.4□□□□□ -0.58
GMDS-208ENST00000530927 SCGB1D4Q6XE38 83 aa11.4□□□□□ -0.58
GMDS-208ENST00000530927 MRPL55Q7Z7F7 128 aaKnown RBP11.4□□□□□ -0.58
GMDS-208ENST00000530927 Q8NDZ9 215 aa11.4□□□□□ -0.58
GMDS-208ENST00000530927 SND1-IT1Q9HBX3 110 aa11.4□□□□□ -0.58
GMDS-208ENST00000530927 RPL37AP8A6NKH3 93 aa11.39□□□□□ -0.59
GMDS-208ENST00000530927 LINC01600Q96MT4 127 aa11.39□□□□□ -0.59
GMDS-208ENST00000530927 TIMM17BO60830 172 aa11.38□□□□□ -0.59
GMDS-208ENST00000530927 LINC00167Q96N53 147 aa11.38□□□□□ -0.59
GMDS-208ENST00000530927 PLA2G2DQ9UNK4 145 aa11.37□□□□□ -0.59
GMDS-208ENST00000530927 REG3GQ6UW15 175 aa11.36□□□□□ -0.59
GMDS-208ENST00000530927 MIR7-3HGQ8N6C7 128 aa11.36□□□□□ -0.59
GMDS-208ENST00000530927 C9orf118A6NHY6 69 aa11.35□□□□□ -0.59
GMDS-208ENST00000530927 VAMP3Q15836 100 aa11.35□□□□□ -0.59
GMDS-208ENST00000530927 IGLV5-37A0A075B6J1 123 aa11.35□□□□□ -0.59
GMDS-208ENST00000530927 TMEM238C9JI98 176 aa11.35□□□□□ -0.59
GMDS-208ENST00000530927 VPREB1P12018 145 aa11.35□□□□□ -0.59
GMDS-208ENST00000530927 LITAFQ99732 161 aa11.35□□□□□ -0.59
GMDS-208ENST00000530927 ADAMTSL4-AS1Q5T5F5 129 aa11.34□□□□□ -0.59
GMDS-208ENST00000530927 CEND1Q8N111 149 aa11.33□□□□□ -0.6
GMDS-208ENST00000530927 DAND5Q8N907 189 aa11.33□□□□□ -0.6
GMDS-208ENST00000530927 NKAPP1Q8N9T2 125 aa11.33□□□□□ -0.6
GMDS-208ENST00000530927 H0Y9J4 135 aa11.32□□□□□ -0.6
GMDS-208ENST00000530927 IGKV2-28A0A075B6P5 120 aa11.31□□□□□ -0.6
GMDS-208ENST00000530927 IGKV2D-28P01615 120 aa11.31□□□□□ -0.6
GMDS-208ENST00000530927 KRTAP10-8P60410 259 aa11.31□□□□□ -0.6
GMDS-208ENST00000530927 Q6ZVH6 145 aa11.31□□□□□ -0.6
GMDS-208ENST00000530927 GTF2H5Q6ZYL4 71 aa11.31□□□□□ -0.6
GMDS-208ENST00000530927 DIRC1Q969H9 104 aa11.31□□□□□ -0.6
GMDS-208ENST00000530927 SPANXDQ9BXN6 97 aa11.31□□□□□ -0.6
GMDS-208ENST00000530927 SPANXCQ9NY87 97 aa11.31□□□□□ -0.6
GMDS-208ENST00000530927 HMCN2Q8NDA2 5059 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms