RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 GAGE2AQ6NT46 116 aa11.81□□□□□ -0.52
USH1C-205ENST00000527020 DNAH3Q8TD57 4116 aa11.8□□□□□ -0.52
USH1C-205ENST00000527020 C14orf132Q9NPU4 83 aa11.8□□□□□ -0.52
USH1C-205ENST00000527020 MUC7Q8TAX7 377 aa11.79□□□□□ -0.52
USH1C-205ENST00000527020 ORMDL1Q9P0S3 153 aa11.79□□□□□ -0.52
USH1C-205ENST00000527020 STAB1Q9NY15 2570 aa11.79□□□□□ -0.52
USH1C-205ENST00000527020 Q8N814 137 aa11.79□□□□□ -0.52
USH1C-205ENST00000527020 GVQW2A0A096LPI5 108 aaPredicted RBP11.78□□□□□ -0.52
USH1C-205ENST00000527020 LINC00643Q86TS7 51 aa11.78□□□□□ -0.52
USH1C-205ENST00000527020 FLNBO75369 2602 aaKnown RBP11.78□□□□□ -0.52
USH1C-205ENST00000527020 A0A1B0GX51 115 aa11.78□□□□□ -0.52
USH1C-205ENST00000527020 KRTAP26-1Q6PEX3 210 aa11.78□□□□□ -0.52
USH1C-205ENST00000527020 C6orf48Q9UBA6 75 aa11.78□□□□□ -0.52
USH1C-205ENST00000527020 C6orf99Q4VX62 202 aa11.77□□□□□ -0.53
USH1C-205ENST00000527020 S100A7L2Q5SY68 101 aa11.75□□□□□ -0.53
USH1C-205ENST00000527020 ESRGQ1W209 222 aa11.74□□□□□ -0.53
USH1C-205ENST00000527020 IMUPQ9GZP8 106 aa11.74□□□□□ -0.53
USH1C-205ENST00000527020 IGLV6-57P01721 117 aa11.73□□□□□ -0.53
USH1C-205ENST00000527020 BAHCC1Q9P281 2608 aa11.72□□□□□ -0.53
USH1C-205ENST00000527020 RPL18AQ02543 176 aaKnown RBP11.72□□□□□ -0.53
USH1C-205ENST00000527020 HIGD2BQ4VC39 106 aa11.72□□□□□ -0.53
USH1C-205ENST00000527020 LINC00575Q6W349 94 aa11.71□□□□□ -0.53
USH1C-205ENST00000527020 C3orf56Q8N813 242 aa11.71□□□□□ -0.53
USH1C-205ENST00000527020 XAGE1AQ9HD64 81 aa11.71□□□□□ -0.54
USH1C-205ENST00000527020 C15orf56Q8N910 161 aa11.69□□□□□ -0.54
USH1C-205ENST00000527020 MAST4O15021 2626 aa11.69□□□□□ -0.54
USH1C-205ENST00000527020 LINC00846Q9NV44 126 aa11.69□□□□□ -0.54
USH1C-205ENST00000527020 TMEM256-PLSCR3K7ERE1 68 aa11.68□□□□□ -0.54
USH1C-205ENST00000527020 CCDC179H3BU77 68 aa11.68□□□□□ -0.54
USH1C-205ENST00000527020 DEFB131BA0A096LNP1 70 aa11.67□□□□□ -0.54
USH1C-205ENST00000527020 ZNF561-AS1K7EIQ3 104 aa11.67□□□□□ -0.54
USH1C-205ENST00000527020 CAMK2N2Q96S95 79 aa11.67□□□□□ -0.54
USH1C-205ENST00000527020 FAM236AA0A1B0GUQ0 79 aa11.67□□□□□ -0.54
USH1C-205ENST00000527020 FAM236BA0A1B0GV22 79 aa11.67□□□□□ -0.54
USH1C-205ENST00000527020 TRBV10-3A0A0K0K1G6 114 aa11.66□□□□□ -0.54
USH1C-205ENST00000527020 Q6ZRU5 148 aa11.66□□□□□ -0.54
USH1C-205ENST00000527020 C11orf45Q8TAV5 145 aa11.66□□□□□ -0.54
USH1C-205ENST00000527020 CCKP06307 115 aa11.65□□□□□ -0.54
USH1C-205ENST00000527020 LINC01556Q5JQF7 62 aa11.65□□□□□ -0.54
USH1C-205ENST00000527020 hADV29S1A0JD25 119 aa11.65□□□□□ -0.54
USH1C-205ENST00000527020 JMJD7-PLA2G4BH0Y9G9 81 aa11.65□□□□□ -0.54
USH1C-205ENST00000527020 VPREB1P12018 145 aa11.63□□□□□ -0.55
USH1C-205ENST00000527020 NOTCH1P46531 2555 aa11.63□□□□□ -0.55
USH1C-205ENST00000527020 TRAV23DV6A0A075B6W5 121 aa11.62□□□□□ -0.55
USH1C-205ENST00000527020 C2orf48Q96LS8 159 aa11.62□□□□□ -0.55
USH1C-205ENST00000527020 C1orf43Q9BWL3 253 aa11.62□□□□□ -0.55
USH1C-205ENST00000527020 B5MCH6 92 aa11.61□□□□□ -0.55
USH1C-205ENST00000527020 Q6JHZ5 121 aa11.61□□□□□ -0.55
USH1C-205ENST00000527020 IGKV2D-24A0A075B6R9 120 aa11.6□□□□□ -0.55
USH1C-205ENST00000527020 NDUFC2-KCTD14E9PQ53 114 aa11.6□□□□□ -0.55
USH1C-205ENST00000527020 DIRC1Q969H9 104 aa11.6□□□□□ -0.55
USH1C-205ENST00000527020 IGKV3D-7A0A0C4DH55 119 aa11.58□□□□□ -0.56
USH1C-205ENST00000527020 ZNF73O43830 326 aaPredicted RBP11.58□□□□□ -0.56
USH1C-205ENST00000527020 DNAH10OSP0CZ25 163 aa11.58□□□□□ -0.56
USH1C-205ENST00000527020 Q6ZQY7 126 aa11.58□□□□□ -0.56
USH1C-205ENST00000527020 HIST1H4AP62805 103 aaKnown RBP11.57□□□□□ -0.56
USH1C-205ENST00000527020 Q6ZRP5 223 aa11.57□□□□□ -0.56
USH1C-205ENST00000527020 PRB2P02812 416 aaPredicted RBP11.56□□□□□ -0.56
USH1C-205ENST00000527020 NBEAL1Q6ZS30 2694 aa11.56□□□□□ -0.56
USH1C-205ENST00000527020 HUWE1Q7Z6Z7 4374 aaKnown RBP11.56□□□□□ -0.56
USH1C-205ENST00000527020 DNAH1Q9P2D7 4330 aa11.55□□□□□ -0.56
USH1C-205ENST00000527020 M0R378 163 aa11.55□□□□□ -0.56
USH1C-205ENST00000527020 ELOF1P60002 83 aaKnown RBP11.55□□□□□ -0.56
USH1C-205ENST00000527020 COX7BP24311 80 aa11.54□□□□□ -0.56
USH1C-205ENST00000527020 Q6ZQT0 140 aa11.54□□□□□ -0.56
USH1C-205ENST00000527020 COL6A5A8TX70 2615 aa11.53□□□□□ -0.56
USH1C-205ENST00000527020 TRBV7-6A0A0J9YX20 115 aa11.53□□□□□ -0.56
USH1C-205ENST00000527020 F8WDY8 70 aa11.53□□□□□ -0.56
USH1C-205ENST00000527020 RBM3P98179 157 aaKnown RBP11.53□□□□□ -0.56
USH1C-205ENST00000527020 SYCNQ0VAF6 134 aa11.53□□□□□ -0.56
USH1C-205ENST00000527020 TRAV10A0A0B4J240 114 aa11.52□□□□□ -0.56
USH1C-205ENST00000527020 LINC00588Q9Y4M8 146 aa11.52□□□□□ -0.56
USH1C-205ENST00000527020 LOC110117498A0A087WWA1 95 aa11.52□□□□□ -0.57
USH1C-205ENST00000527020 SS18L2Q9UHA2 77 aa11.52□□□□□ -0.57
USH1C-205ENST00000527020 LAMTOR3Q9UHA4 124 aa11.52□□□□□ -0.57
USH1C-205ENST00000527020 TM2D3Q9BRN9 247 aa11.51□□□□□ -0.57
USH1C-205ENST00000527020 A0A087WVE0 104 aa11.5□□□□□ -0.57
USH1C-205ENST00000527020 M0R2N4 97 aa11.5□□□□□ -0.57
USH1C-205ENST00000527020 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.5□□□□□ -0.57
USH1C-205ENST00000527020 H3BQ85 93 aa11.48□□□□□ -0.57
USH1C-205ENST00000527020 K7EIL1 84 aa11.48□□□□□ -0.57
USH1C-205ENST00000527020 LINC00528Q8N1L1 170 aa11.48□□□□□ -0.57
USH1C-205ENST00000527020 CASC10Q5T4H9 136 aa11.48□□□□□ -0.57
USH1C-205ENST00000527020 SERTAD4-AS1Q5TG53 156 aa11.46□□□□□ -0.57
USH1C-205ENST00000527020 MRAPQ8TCY5 172 aa11.46□□□□□ -0.57
USH1C-205ENST00000527020 C3orf22Q8N5N4 141 aa11.45□□□□□ -0.58
USH1C-205ENST00000527020 ATOX1O00244 68 aa11.44□□□□□ -0.58
USH1C-205ENST00000527020 ATP5EP2Q5VTU8 51 aa11.44□□□□□ -0.58
USH1C-205ENST00000527020 DSCR8Q96T75 97 aa11.44□□□□□ -0.58
USH1C-205ENST00000527020 USP17L23D6RBM5 183 aa11.44□□□□□ -0.58
USH1C-205ENST00000527020 TLX1NBP0CAT3 122 aa11.44□□□□□ -0.58
USH1C-205ENST00000527020 UBL5Q9BZL1 73 aa11.44□□□□□ -0.58
USH1C-205ENST00000527020 UQCRQO14949 82 aa11.43□□□□□ -0.58
USH1C-205ENST00000527020 TRBV7-4A0A0J9YYF1 115 aa11.42□□□□□ -0.58
USH1C-205ENST00000527020 C7orf33Q8WU49 177 aa11.42□□□□□ -0.58
USH1C-205ENST00000527020 KCNQ1DNQ9H478 68 aa11.42□□□□□ -0.58
USH1C-205ENST00000527020 COX7CP15954 63 aa11.41□□□□□ -0.58
USH1C-205ENST00000527020 PDE6GP18545 87 aa11.4□□□□□ -0.58
USH1C-205ENST00000527020 FAM19A1Q7Z5A9 133 aa11.4□□□□□ -0.58
USH1C-205ENST00000527020 NKAPP1Q8N9T2 125 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms