RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 E9PLD3 99 aa9.32□□□□□ -0.92
SF3B2-202ENST00000524475 AKR1D1P51857 326 aa9.32□□□□□ -0.92
SF3B2-202ENST00000524475 OXTP01178 125 aa9.31□□□□□ -0.92
SF3B2-202ENST00000524475 MRPL55Q7Z7F7 128 aaKnown RBP9.31□□□□□ -0.92
SF3B2-202ENST00000524475 C20orf202A1L168 122 aa9.3□□□□□ -0.92
SF3B2-202ENST00000524475 KRTDAPP60985 99 aa9.3□□□□□ -0.92
SF3B2-202ENST00000524475 UBE2BP63146 152 aa9.3□□□□□ -0.92
SF3B2-202ENST00000524475 SRSF9Q13242 221 aaKnown RBP eCLIP9.3□□□□□ -0.92
SF3B2-202ENST00000524475 SPINK6Q6UWN8 80 aa9.3□□□□□ -0.92
SF3B2-202ENST00000524475 HIST3H2BBQ8N257 126 aa9.3□□□□□ -0.92
SF3B2-202ENST00000524475 LGALS3P17931 250 aaKnown RBP9.29□□□□□ -0.92
SF3B2-202ENST00000524475 LINC00158P58513 81 aa9.29□□□□□ -0.92
SF3B2-202ENST00000524475 MEIG1Q5JSS6 88 aa9.29□□□□□ -0.92
SF3B2-202ENST00000524475 KRTAP11-1Q8IUC1 163 aa9.29□□□□□ -0.92
SF3B2-202ENST00000524475 HERC1Q15751 4861 aa9.29□□□□□ -0.92
SF3B2-202ENST00000524475 S100A6P06703 90 aa9.28□□□□□ -0.92
SF3B2-202ENST00000524475 SMIM13P0DJ93 91 aa9.28□□□□□ -0.92
SF3B2-202ENST00000524475 VPREB1P12018 145 aa9.28□□□□□ -0.92
SF3B2-202ENST00000524475 RPL24P83731 157 aaKnown RBP9.28□□□□□ -0.92
SF3B2-202ENST00000524475 C1orf137Q5JT78 98 aa9.28□□□□□ -0.92
SF3B2-202ENST00000524475 NKAPP1Q8N9T2 125 aa9.28□□□□□ -0.92
SF3B2-202ENST00000524475 HIST1H2BLQ99880 126 aa9.27□□□□□ -0.93
SF3B2-202ENST00000524475 IGLV7-43P04211 117 aa9.26□□□□□ -0.93
SF3B2-202ENST00000524475 S100A2P29034 98 aa9.26□□□□□ -0.93
SF3B2-202ENST00000524475 MIR7-3HGQ8N6C7 128 aa9.26□□□□□ -0.93
SF3B2-202ENST00000524475 LINC00167Q96N53 147 aa9.26□□□□□ -0.93
SF3B2-202ENST00000524475 LOC107984156A0A0G2JMH3 177 aa9.25□□□□□ -0.93
SF3B2-202ENST00000524475 ARL17AQ8IVW1 177 aa9.25□□□□□ -0.93
SF3B2-202ENST00000524475 TNXBP22105 4242 aa9.25□□□□□ -0.93
SF3B2-202ENST00000524475 A0A0U1RRA0 63 aa9.24□□□□□ -0.93
SF3B2-202ENST00000524475 Q8NDZ9 215 aa9.23□□□□□ -0.93
SF3B2-202ENST00000524475 A0A0J9YXY3 114 aa9.22□□□□□ -0.93
SF3B2-202ENST00000524475 C5orf52A6NGY3 159 aa9.22□□□□□ -0.93
SF3B2-202ENST00000524475 SNRPEP62304 92 aaKnown RBP9.22□□□□□ -0.93
SF3B2-202ENST00000524475 REG3GQ6UW15 175 aa9.22□□□□□ -0.93
SF3B2-202ENST00000524475 IGKV2D-26A0A0A0MRZ7 120 aa9.21□□□□□ -0.94
SF3B2-202ENST00000524475 J3QL48 77 aa9.21□□□□□ -0.94
SF3B2-202ENST00000524475 DIRC1Q969H9 104 aa9.21□□□□□ -0.94
SF3B2-202ENST00000524475 IGLV1-50A0A075B6I6 118 aa9.2□□□□□ -0.94
SF3B2-202ENST00000524475 BCE1O60756 84 aa9.2□□□□□ -0.94
SF3B2-202ENST00000524475 TIMM17BO60830 172 aa9.2□□□□□ -0.94
SF3B2-202ENST00000524475 BOD1L2Q8IYS8 172 aa9.2□□□□□ -0.94
SF3B2-202ENST00000524475 GAGE10A6NGK3 116 aa9.19□□□□□ -0.94
SF3B2-202ENST00000524475 RPL37AP8A6NKH3 93 aa9.19□□□□□ -0.94
SF3B2-202ENST00000524475 M0R378 163 aa9.19□□□□□ -0.94
SF3B2-202ENST00000524475 ZNF861PO60384 105 aa9.19□□□□□ -0.94
SF3B2-202ENST00000524475 LINC01600Q96MT4 127 aa9.19□□□□□ -0.94
SF3B2-202ENST00000524475 ZNF815PA8K554 130 aa9.18□□□□□ -0.94
SF3B2-202ENST00000524475 H0Y9J4 135 aa9.18□□□□□ -0.94
SF3B2-202ENST00000524475 IGKV2-28A0A075B6P5 120 aa9.17□□□□□ -0.94
SF3B2-202ENST00000524475 NDUFC2O95298 119 aa9.17□□□□□ -0.94
SF3B2-202ENST00000524475 IGKV2D-28P01615 120 aa9.17□□□□□ -0.94
SF3B2-202ENST00000524475 ANKRD39Q53RE8 183 aa9.17□□□□□ -0.94
SF3B2-202ENST00000524475 DAND5Q8N907 189 aa9.17□□□□□ -0.94
SF3B2-202ENST00000524475 LITAFQ99732 161 aa9.17□□□□□ -0.94
SF3B2-202ENST00000524475 MIEN1Q9BRT3 115 aa9.17□□□□□ -0.94
SF3B2-202ENST00000524475 TRBV10-2A0A0K0K1G8 114 aa9.16□□□□□ -0.94
SF3B2-202ENST00000524475 MT1HL1P0DM35 61 aa9.16□□□□□ -0.94
SF3B2-202ENST00000524475 RPL28P46779 137 aaKnown RBP9.16□□□□□ -0.94
SF3B2-202ENST00000524475 ADAMTSL4-AS1Q5T5F5 129 aa9.16□□□□□ -0.94
SF3B2-202ENST00000524475 KRTAP13-1Q8IUC0 172 aa9.16□□□□□ -0.94
SF3B2-202ENST00000524475 ATOH7Q8N100 152 aa9.16□□□□□ -0.94
SF3B2-202ENST00000524475 TTTY13Q9BZ97 58 aa9.14□□□□□ -0.95
SF3B2-202ENST00000524475 TMEM126AQ9H061 195 aa9.14□□□□□ -0.95
SF3B2-202ENST00000524475 SPANXB1Q9NS25 103 aaPredicted RBP9.14□□□□□ -0.95
SF3B2-202ENST00000524475 PRYO14603 147 aa9.13□□□□□ -0.95
SF3B2-202ENST00000524475 SOSTDC1Q6X4U4 206 aa9.13□□□□□ -0.95
SF3B2-202ENST00000524475 PPDPFQ9H3Y8 114 aa9.13□□□□□ -0.95
SF3B2-202ENST00000524475 KCNQ1DNQ9H478 68 aa9.12□□□□□ -0.95
SF3B2-202ENST00000524475 HSBP1L1C9JCN9 74 aa9.11□□□□□ -0.95
SF3B2-202ENST00000524475 TMEM238C9JI98 176 aa9.11□□□□□ -0.95
SF3B2-202ENST00000524475 NCR3O14931 201 aa9.11□□□□□ -0.95
SF3B2-202ENST00000524475 SPRR1AP35321 89 aa9.11□□□□□ -0.95
SF3B2-202ENST00000524475 LINC00308Q8TCZ7 52 aa9.11□□□□□ -0.95
SF3B2-202ENST00000524475 SPANXDQ9BXN6 97 aa9.11□□□□□ -0.95
SF3B2-202ENST00000524475 SPANXCQ9NY87 97 aa9.11□□□□□ -0.95
SF3B2-202ENST00000524475 KRTAP1-4P0C5Y4 121 aa9.1□□□□□ -0.95
SF3B2-202ENST00000524475 UBE2AP49459 152 aa9.1□□□□□ -0.95
SF3B2-202ENST00000524475 KRTAP10-8P60410 259 aa9.1□□□□□ -0.95
SF3B2-202ENST00000524475 SCGB1D4Q6XE38 83 aa9.1□□□□□ -0.95
SF3B2-202ENST00000524475 Q6ZVH6 145 aa9.1□□□□□ -0.95
SF3B2-202ENST00000524475 TRBV10-3A0A0K0K1G6 114 aa9.09□□□□□ -0.95
SF3B2-202ENST00000524475 EIF4EBP3O60516 100 aaPredicted RBP9.09□□□□□ -0.95
SF3B2-202ENST00000524475 S100A12P80511 92 aa9.09□□□□□ -0.95
SF3B2-202ENST00000524475 PCP2Q8IVA1 136 aa9.09□□□□□ -0.95
SF3B2-202ENST00000524475 LINC00337Q8N6G1 96 aa9.09□□□□□ -0.95
SF3B2-202ENST00000524475 SCGB1D1O95968 90 aa9.08□□□□□ -0.96
SF3B2-202ENST00000524475 IGLV6-57P01721 117 aa9.08□□□□□ -0.96
SF3B2-202ENST00000524475 COPS9Q8WXC6 57 aa9.08□□□□□ -0.96
SF3B2-202ENST00000524475 KRTAP4-16G5E9R7 235 aaPredicted RBP9.07□□□□□ -0.96
SF3B2-202ENST00000524475 IFITM1P13164 125 aa9.07□□□□□ -0.96
SF3B2-202ENST00000524475 DDTP30046 118 aa9.07□□□□□ -0.96
SF3B2-202ENST00000524475 FAM19A1Q7Z5A9 133 aa9.07□□□□□ -0.96
SF3B2-202ENST00000524475 NPC2P61916 151 aa9.06□□□□□ -0.96
SF3B2-202ENST00000524475 CBY1Q9Y3M2 126 aa9.06□□□□□ -0.96
SF3B2-202ENST00000524475 PRLHP81277 87 aa9.05□□□□□ -0.96
SF3B2-202ENST00000524475 S100A7L2Q5SY68 101 aa9.04□□□□□ -0.96
SF3B2-202ENST00000524475 LINC00518Q8N0U6 118 aa9.04□□□□□ -0.96
SF3B2-202ENST00000524475 HMCN2Q8NDA2 5059 aa9.04□□□□□ -0.96
SF3B2-202ENST00000524475 RPL13AP40429 203 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms