RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 NDPQ00604 133 aa5.16□□□□□ -1.58
HDAC3-216ENST00000523088 TMEM61Q8N0U2 210 aa5.16□□□□□ -1.58
HDAC3-216ENST00000523088 C1orf64Q8NEQ6 169 aa5.16□□□□□ -1.58
HDAC3-216ENST00000523088 CNFNQ9BYD5 112 aa5.16□□□□□ -1.58
HDAC3-216ENST00000523088 KLK15Q9H2R5 256 aa5.16□□□□□ -1.58
HDAC3-216ENST00000523088 COL7A1Q02388 2944 aa5.16□□□□□ -1.58
HDAC3-216ENST00000523088 IGHV3-35A0A0C4DH35 117 aa5.15□□□□□ -1.59
HDAC3-216ENST00000523088 IGKV1-6A0A0C4DH72 117 aa5.15□□□□□ -1.59
HDAC3-216ENST00000523088 KRTAP16-1A8MUX0 517 aa5.15□□□□□ -1.59
HDAC3-216ENST00000523088 RPL36AP83881 106 aaKnown RBP5.15□□□□□ -1.59
HDAC3-216ENST00000523088 IGHV4OR15-8A0A075B7B6 117 aa5.14□□□□□ -1.59
HDAC3-216ENST00000523088 A0A087WW49 117 aa5.14□□□□□ -1.59
HDAC3-216ENST00000523088 DEFA4P12838 97 aa5.14□□□□□ -1.59
HDAC3-216ENST00000523088 TSPEAR-AS2P59090 65 aa5.14□□□□□ -1.59
HDAC3-216ENST00000523088 PDE6HQ13956 83 aa5.14□□□□□ -1.59
HDAC3-216ENST00000523088 NREPQ16612 68 aa5.14□□□□□ -1.59
HDAC3-216ENST00000523088 ENHOQ6UWT2 76 aa5.14□□□□□ -1.59
HDAC3-216ENST00000523088 Q8N814 137 aa5.14□□□□□ -1.59
HDAC3-216ENST00000523088 A6NED7 52 aa5.13□□□□□ -1.59
HDAC3-216ENST00000523088 K7EQD1 137 aa5.13□□□□□ -1.59
HDAC3-216ENST00000523088 IGLV2-23P01705 113 aa5.13□□□□□ -1.59
HDAC3-216ENST00000523088 SLURP1P55000 103 aa5.13□□□□□ -1.59
HDAC3-216ENST00000523088 REG3AQ06141 175 aa5.13□□□□□ -1.59
HDAC3-216ENST00000523088 C2orf83Q53S99 150 aa5.13□□□□□ -1.59
HDAC3-216ENST00000523088 FAM74A4Q5TZK3 123 aa5.13□□□□□ -1.59
HDAC3-216ENST00000523088 LINC00322Q6ZN03 302 aaPredicted RBP5.13□□□□□ -1.59
HDAC3-216ENST00000523088 IGHV4-28A0A0C4DH34 117 aa5.12□□□□□ -1.59
HDAC3-216ENST00000523088 NDUFB1O75438 58 aa5.12□□□□□ -1.59
HDAC3-216ENST00000523088 IGHV3-11P01762 117 aa5.12□□□□□ -1.59
HDAC3-216ENST00000523088 MIAQ16674 131 aa5.12□□□□□ -1.59
HDAC3-216ENST00000523088 Q8N9P0 234 aaPredicted RBP5.12□□□□□ -1.59
HDAC3-216ENST00000523088 Q9BRP9 147 aa5.12□□□□□ -1.59
HDAC3-216ENST00000523088 C11orf21Q9P2W6 132 aa5.12□□□□□ -1.59
HDAC3-216ENST00000523088 DNAH9Q9NYC9 4486 aa5.12□□□□□ -1.59
HDAC3-216ENST00000523088 TENM3Q9P273 2699 aa5.12□□□□□ -1.59
HDAC3-216ENST00000523088 LCE6AA0A183 80 aa5.11□□□□□ -1.59
HDAC3-216ENST00000523088 H0YGX0 51 aa5.11□□□□□ -1.59
HDAC3-216ENST00000523088 IGHV3-30-3P0DP02 117 aa5.11□□□□□ -1.59
HDAC3-216ENST00000523088 IGHV4-30-4P0DP06 118 aa5.11□□□□□ -1.59
HDAC3-216ENST00000523088 LYZL1Q6UWQ5 148 aa5.11□□□□□ -1.59
HDAC3-216ENST00000523088 Q86TA4 180 aa5.11□□□□□ -1.59
HDAC3-216ENST00000523088 C14orf178Q8N769 122 aaPredicted RBP5.11□□□□□ -1.59
HDAC3-216ENST00000523088 LINC00476Q8WZB0 136 aa5.11□□□□□ -1.59
HDAC3-216ENST00000523088 S4R3C0 116 aa5.11□□□□□ -1.59
HDAC3-216ENST00000523088 STAB2Q8WWQ8 2551 aa5.11□□□□□ -1.59
HDAC3-216ENST00000523088 ZFAND2AQ8N6M9 145 aa5.1□□□□□ -1.59
HDAC3-216ENST00000523088 TMEM167AQ8TBQ9 72 aa5.1□□□□□ -1.59
HDAC3-216ENST00000523088 MRPL36Q9P0J6 103 aaKnown RBP5.1□□□□□ -1.59
HDAC3-216ENST00000523088 BRWD1-AS2P59051 145 aa5.09□□□□□ -1.59
HDAC3-216ENST00000523088 KLK9Q2XQG4 91 aa5.09□□□□□ -1.59
HDAC3-216ENST00000523088 MUC7Q8TAX7 377 aa5.09□□□□□ -1.59
HDAC3-216ENST00000523088 KLK9Q9UKQ9 250 aa5.09□□□□□ -1.59
HDAC3-216ENST00000523088 TRAV10A0A0B4J240 114 aa5.08□□□□□ -1.6
HDAC3-216ENST00000523088 IGLV2-14P01704 120 aa5.08□□□□□ -1.6
HDAC3-216ENST00000523088 PDE6GP18545 87 aa5.08□□□□□ -1.6
HDAC3-216ENST00000523088 ROMO1P60602 79 aa5.08□□□□□ -1.6
HDAC3-216ENST00000523088 KMT2CQ8NEZ4 4911 aaKnown RBP5.08□□□□□ -1.6
HDAC3-216ENST00000523088 IGLV4-69A0A075B6H9 119 aa5.07□□□□□ -1.6
HDAC3-216ENST00000523088 IGHV3-74A0A0B4J1X5 117 aa5.07□□□□□ -1.6
HDAC3-216ENST00000523088 A8MU10 97 aa5.07□□□□□ -1.6
HDAC3-216ENST00000523088 CTSGP08311 255 aa5.07□□□□□ -1.6
HDAC3-216ENST00000523088 MRGPRG-AS1Q2M3A8 158 aa5.07□□□□□ -1.6
HDAC3-216ENST00000523088 LYPD1Q8N2G4 141 aa5.07□□□□□ -1.6
HDAC3-216ENST00000523088 C20orf203Q8NBC4 194 aa5.07□□□□□ -1.6
HDAC3-216ENST00000523088 LITAFQ99732 161 aa5.07□□□□□ -1.6
HDAC3-216ENST00000523088 PLA2G2DQ9UNK4 145 aa5.07□□□□□ -1.6
HDAC3-216ENST00000523088 IGLV11-55A0A075B6I3 123 aa5.06□□□□□ -1.6
HDAC3-216ENST00000523088 CHTF8P0CG12 524 aa5.06□□□□□ -1.6
HDAC3-216ENST00000523088 APELAP0DMC3 54 aa5.06□□□□□ -1.6
HDAC3-216ENST00000523088 C1orf134Q5TEV5 83 aa5.06□□□□□ -1.6
HDAC3-216ENST00000523088 PRR15LQ9BU68 103 aa5.06□□□□□ -1.6
HDAC3-216ENST00000523088 SMIM2Q9BVW6 85 aa5.06□□□□□ -1.6
HDAC3-216ENST00000523088 OCR1Q9BZK8 76 aa5.06□□□□□ -1.6
HDAC3-216ENST00000523088 C14orf132Q9NPU4 83 aa5.06□□□□□ -1.6
HDAC3-216ENST00000523088 NDUFA4L2Q9NRX3 87 aa5.06□□□□□ -1.6
HDAC3-216ENST00000523088 DNAH7Q8WXX0 4024 aa5.06□□□□□ -1.6
HDAC3-216ENST00000523088 TRBV6-5A0A0K0K1A5 114 aa5.05□□□□□ -1.6
HDAC3-216ENST00000523088 H3BQ85 93 aa5.05□□□□□ -1.6
HDAC3-216ENST00000523088 C10orf55Q5SWW7 151 aa5.05□□□□□ -1.6
HDAC3-216ENST00000523088 SPANXA2-OT1Q8N9U9 137 aa5.05□□□□□ -1.6
HDAC3-216ENST00000523088 BPY2O14599 106 aa5.04□□□□□ -1.6
HDAC3-216ENST00000523088 LINC01547P58512 204 aaPredicted RBP5.04□□□□□ -1.6
HDAC3-216ENST00000523088 DEFB114Q30KQ6 69 aa5.04□□□□□ -1.6
HDAC3-216ENST00000523088 CASC10Q5T4H9 136 aa5.04□□□□□ -1.6
HDAC3-216ENST00000523088 C10orf113Q5VZT2 155 aa5.04□□□□□ -1.6
HDAC3-216ENST00000523088 Q8N3U1 123 aa5.04□□□□□ -1.6
HDAC3-216ENST00000523088 CSNK1G2-AS1Q8NCQ2 148 aa5.04□□□□□ -1.6
HDAC3-216ENST00000523088 ZCCHC13Q8WW36 166 aaKnown RBP5.04□□□□□ -1.6
HDAC3-216ENST00000523088 HUWE1Q7Z6Z7 4374 aaKnown RBP5.04□□□□□ -1.6
HDAC3-216ENST00000523088 IGHV4-4A0A075B6R2 117 aa5.03□□□□□ -1.6
HDAC3-216ENST00000523088 IGHV3-38A0A0C4DH36 116 aa5.03□□□□□ -1.6
HDAC3-216ENST00000523088 NDUFA4O00483 81 aa5.03□□□□□ -1.6
HDAC3-216ENST00000523088 RTL8CO15255 209 aa5.03□□□□□ -1.6
HDAC3-216ENST00000523088 CMC4P56277 68 aaPredicted RBP5.03□□□□□ -1.6
HDAC3-216ENST00000523088 Q8NDZ9 215 aa5.03□□□□□ -1.6
HDAC3-216ENST00000523088 NBEAL2Q6ZNJ1 2754 aa5.03□□□□□ -1.6
HDAC3-216ENST00000523088 LOC110117498A0A087WWA1 95 aa5.02□□□□□ -1.61
HDAC3-216ENST00000523088 TRAV12-3A0A0B4J271 114 aa5.02□□□□□ -1.61
HDAC3-216ENST00000523088 CRPP02741 224 aa5.02□□□□□ -1.61
HDAC3-216ENST00000523088 ERHP84090 104 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms