RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 PRB4P10163 310 aaPredicted RBP2.48□□□□□ -2.01
SKP1-210ENST00000522855 PSMB2P49721 201 aa2.48□□□□□ -2.01
SKP1-210ENST00000522855 MRPL51Q4U2R6 128 aaKnown RBP2.48□□□□□ -2.01
SKP1-210ENST00000522855 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.48□□□□□ -2.01
SKP1-210ENST00000522855 Q6ZQT7 251 aa2.48□□□□□ -2.01
SKP1-210ENST00000522855 GOLT1AQ6ZVE7 132 aa2.48□□□□□ -2.01
SKP1-210ENST00000522855 EXOC3-AS1Q8N2X6 119 aa2.48□□□□□ -2.01
SKP1-210ENST00000522855 CIRBP-AS1Q8TBR5 109 aa2.48□□□□□ -2.01
SKP1-210ENST00000522855 DYNLRB2Q8TF09 96 aa2.48□□□□□ -2.01
SKP1-210ENST00000522855 DPH3Q96FX2 82 aa2.48□□□□□ -2.01
SKP1-210ENST00000522855 SLC50A1Q9BRV3 221 aa2.48□□□□□ -2.01
SKP1-210ENST00000522855 RHPN1-AS1Q9BWJ2 59 aa2.48□□□□□ -2.01
SKP1-210ENST00000522855 PRO1854Q9UHT4 67 aa2.48□□□□□ -2.01
SKP1-210ENST00000522855 DNAH3Q8TD57 4116 aa2.48□□□□□ -2.01
SKP1-210ENST00000522855 IGKV2-40A0A087WW87 121 aaPredicted RBP2.47□□□□□ -2.01
SKP1-210ENST00000522855 TRAV8-1A0A0A6YYK1 113 aa2.47□□□□□ -2.01
SKP1-210ENST00000522855 A0A0J9YY99 117 aa2.47□□□□□ -2.01
SKP1-210ENST00000522855 FAM236AA0A1B0GUQ0 79 aa2.47□□□□□ -2.01
SKP1-210ENST00000522855 FAM236BA0A1B0GV22 79 aa2.47□□□□□ -2.01
SKP1-210ENST00000522855 BCE1O60756 84 aa2.47□□□□□ -2.01
SKP1-210ENST00000522855 NDUFC2O95298 119 aa2.47□□□□□ -2.01
SKP1-210ENST00000522855 IGKV2D-40P01614 121 aaPredicted RBP2.47□□□□□ -2.01
SKP1-210ENST00000522855 IGHV3-30P01768 117 aa2.47□□□□□ -2.01
SKP1-210ENST00000522855 IGHV3-33P01772 117 aa2.47□□□□□ -2.01
SKP1-210ENST00000522855 IGHV3-30-5P0DP03 117 aa2.47□□□□□ -2.01
SKP1-210ENST00000522855 SLC25A29Q8N8R3 303 aa2.47□□□□□ -2.01
SKP1-210ENST00000522855 DAND5Q8N907 189 aa2.47□□□□□ -2.01
SKP1-210ENST00000522855 UPK3BQ9BT76 320 aa2.47□□□□□ -2.01
SKP1-210ENST00000522855 MRPL35Q9NZE8 188 aaKnown RBP2.47□□□□□ -2.01
SKP1-210ENST00000522855 COL7A1Q02388 2944 aa2.46□□□□□ -2.02
SKP1-210ENST00000522855 LOC107984156A0A0G2JMH3 177 aa2.46□□□□□ -2.02
SKP1-210ENST00000522855 LOC107984640A0A0U1RRK4 108 aa2.46□□□□□ -2.02
SKP1-210ENST00000522855 TINCRA0A1B0GVN0 87 aa2.46□□□□□ -2.02
SKP1-210ENST00000522855 RBAKDNA6NC62 111 aa2.46□□□□□ -2.02
SKP1-210ENST00000522855 SDHAF1A6NFY7 115 aa2.46□□□□□ -2.02
SKP1-210ENST00000522855 OXTP01178 125 aa2.46□□□□□ -2.02
SKP1-210ENST00000522855 TRACP01848 142 aa2.46□□□□□ -2.02
SKP1-210ENST00000522855 CKS2P33552 79 aa2.46□□□□□ -2.02
SKP1-210ENST00000522855 KRTAP10-1P60331 282 aa2.46□□□□□ -2.02
SKP1-210ENST00000522855 MRPS36P82909 103 aaKnown RBP2.46□□□□□ -2.02
SKP1-210ENST00000522855 FAM222AQ5U5X8 452 aa2.46□□□□□ -2.02
SKP1-210ENST00000522855 PRNTQ86SH4 94 aa2.46□□□□□ -2.02
SKP1-210ENST00000522855 ARL17AQ8IVW1 177 aa2.46□□□□□ -2.02
SKP1-210ENST00000522855 C1orf158Q8N1D5 194 aa2.46□□□□□ -2.02
SKP1-210ENST00000522855 Q8TAT8 98 aa2.46□□□□□ -2.02
SKP1-210ENST00000522855 DCANP1Q8TF63 244 aa2.46□□□□□ -2.02
SKP1-210ENST00000522855 TMEM263Q8WUH6 116 aaKnown RBP2.46□□□□□ -2.02
SKP1-210ENST00000522855 COPS9Q8WXC6 57 aa2.46□□□□□ -2.02
SKP1-210ENST00000522855 TTTY13Q9BZ97 58 aa2.46□□□□□ -2.02
SKP1-210ENST00000522855 C11orf86A6NJI1 115 aa2.45□□□□□ -2.02
SKP1-210ENST00000522855 J3QQQ9 107 aa2.45□□□□□ -2.02
SKP1-210ENST00000522855 M0R381 172 aa2.45□□□□□ -2.02
SKP1-210ENST00000522855 LST1O00453 97 aa2.45□□□□□ -2.02
SKP1-210ENST00000522855 ATP5EP56381 51 aaPredicted RBP2.45□□□□□ -2.02
SKP1-210ENST00000522855 DEFB1P60022 68 aa2.45□□□□□ -2.02
SKP1-210ENST00000522855 SNRPD3P62318 126 aaKnown RBP2.45□□□□□ -2.02
SKP1-210ENST00000522855 RPL18AQ02543 176 aaKnown RBP2.45□□□□□ -2.02
SKP1-210ENST00000522855 LINC00336Q6ZUF6 198 aa2.45□□□□□ -2.02
SKP1-210ENST00000522855 SERP2Q8N6R1 65 aa2.45□□□□□ -2.02
SKP1-210ENST00000522855 TOMM6Q96B49 74 aa2.45□□□□□ -2.02
SKP1-210ENST00000522855 TP53TG1Q9Y2A0 90 aa2.45□□□□□ -2.02
SKP1-210ENST00000522855 V9GYY9 64 aa2.45□□□□□ -2.02
SKP1-210ENST00000522855 TGP01266 2768 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 TRAV12-2A0A075B6T6 113 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 TRAV13-1A0A0B4J241 112 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 TEX49A0A1B0GTD5 131 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 ZNF815PA8K554 130 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 PSPHP1O15172 72 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 PPP1R17O96001 155 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 IGLV1-51P01701 117 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 COX6CP09669 75 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 INAFM2P0DMQ5 153 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 CRIP1P50238 77 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 DEFB131AP59861 70 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 DEFB114Q30KQ6 69 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 IGFL1Q6UW32 110 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 LYZL1Q6UWQ5 148 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 C2orf82Q6UX34 121 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 C3orf56Q8N813 242 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 SPANXA2-OT1Q8N9U9 137 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 AMELXQ99217 191 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 SMIM2Q9BVW6 85 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 LAMTOR3Q9UHA4 124 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 SERP1Q9Y6X1 66 aa2.44□□□□□ -2.02
SKP1-210ENST00000522855 LOC389332A0A1B0GUA5 103 aa2.43□□□□□ -2.02
SKP1-210ENST00000522855 KNCNA6PVL3 124 aa2.43□□□□□ -2.02
SKP1-210ENST00000522855 H3BVH4 76 aa2.43□□□□□ -2.02
SKP1-210ENST00000522855 SH2D1AO60880 128 aa2.43□□□□□ -2.02
SKP1-210ENST00000522855 ZNF56Q15929 161 aa2.43□□□□□ -2.02
SKP1-210ENST00000522855 C6orf99Q4VX62 202 aa2.43□□□□□ -2.02
SKP1-210ENST00000522855 ATP5EP2Q5VTU8 51 aa2.43□□□□□ -2.02
SKP1-210ENST00000522855 Q6JHZ5 121 aa2.43□□□□□ -2.02
SKP1-210ENST00000522855 SCGB1D4Q6XE38 83 aa2.43□□□□□ -2.02
SKP1-210ENST00000522855 ZFAND2AQ8N6M9 145 aa2.43□□□□□ -2.02
SKP1-210ENST00000522855 TMEM141Q96I45 108 aa2.43□□□□□ -2.02
SKP1-210ENST00000522855 FAM19A4Q96LR4 140 aa2.43□□□□□ -2.02
SKP1-210ENST00000522855 LENEPQ9Y5L5 61 aa2.43□□□□□ -2.02
SKP1-210ENST00000522855 TMSB15BA0A087X1C1 80 aa2.42□□□□□ -2.02
SKP1-210ENST00000522855 TRBV10-3A0A0K0K1G6 114 aa2.42□□□□□ -2.02
SKP1-210ENST00000522855 LEPROTO15243 131 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms