RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 SS18Q15532 418 aa12.12□□□□□ -0.47
TRAM1-205ENST00000521425 LINC01561Q8N1V8 128 aa12.12□□□□□ -0.47
TRAM1-205ENST00000521425 IGHV4-30-4P0DP06 118 aa12.11□□□□□ -0.47
TRAM1-205ENST00000521425 C16orf95Q9H693 158 aa12.11□□□□□ -0.47
TRAM1-205ENST00000521425 PRO0628Q9UI54 55 aa12.11□□□□□ -0.47
TRAM1-205ENST00000521425 LINC01600Q96MT4 127 aa12.11□□□□□ -0.47
TRAM1-205ENST00000521425 LINC00337Q8N6G1 96 aa12.1□□□□□ -0.47
TRAM1-205ENST00000521425 CMC4P56277 68 aaPredicted RBP12.1□□□□□ -0.47
TRAM1-205ENST00000521425 SNURFQ9Y675 71 aa12.1□□□□□ -0.47
TRAM1-205ENST00000521425 CSMD3Q7Z407 3707 aa12.1□□□□□ -0.47
TRAM1-205ENST00000521425 CCL18P55774 89 aa12.09□□□□□ -0.47
TRAM1-205ENST00000521425 HIGD2BQ4VC39 106 aa12.09□□□□□ -0.47
TRAM1-205ENST00000521425 XAGE1AQ9HD64 81 aa12.09□□□□□ -0.47
TRAM1-205ENST00000521425 A0A087WYN8 130 aa12.09□□□□□ -0.47
TRAM1-205ENST00000521425 C9orf66Q5T8R8 295 aa12.09□□□□□ -0.47
TRAM1-205ENST00000521425 FAM19A1Q7Z5A9 133 aa12.09□□□□□ -0.47
TRAM1-205ENST00000521425 UPK3BQ9BT76 320 aa12.08□□□□□ -0.48
TRAM1-205ENST00000521425 IL17DQ8TAD2 202 aa12.08□□□□□ -0.48
TRAM1-205ENST00000521425 CHCHD10Q8WYQ3 142 aaPredicted RBP12.07□□□□□ -0.48
TRAM1-205ENST00000521425 IGLV5-39A0A0G2JS06 123 aa12.07□□□□□ -0.48
TRAM1-205ENST00000521425 REG3AQ06141 175 aa12.07□□□□□ -0.48
TRAM1-205ENST00000521425 ENHOQ6UWT2 76 aa12.07□□□□□ -0.48
TRAM1-205ENST00000521425 IGHV3OR16-9A0A0B4J2B5 98 aa12.06□□□□□ -0.48
TRAM1-205ENST00000521425 SEC61GP60059 68 aa12.06□□□□□ -0.48
TRAM1-205ENST00000521425 RBM3P98179 157 aaKnown RBP12.05□□□□□ -0.48
TRAM1-205ENST00000521425 SMIM11BQ8TCY0 68 aa12.05□□□□□ -0.48
TRAM1-205ENST00000521425 RPL28P46779 137 aaKnown RBP12.04□□□□□ -0.48
TRAM1-205ENST00000521425 MPLKIPQ8TAP9 179 aa12.04□□□□□ -0.48
TRAM1-205ENST00000521425 OVOL2Q9BRP0 275 aa12.04□□□□□ -0.48
TRAM1-205ENST00000521425 C22orf24Q9Y442 160 aa12.04□□□□□ -0.48
TRAM1-205ENST00000521425 LINC00474Q9P2X8 69 aa12.03□□□□□ -0.48
TRAM1-205ENST00000521425 UNQ6190/PRO20217Q6UXQ8 127 aa12.03□□□□□ -0.48
TRAM1-205ENST00000521425 V9GYY9 64 aa12.03□□□□□ -0.48
TRAM1-205ENST00000521425 APOC4P55056 127 aa12.02□□□□□ -0.49
TRAM1-205ENST00000521425 IGLV5-45A0A087WSX0 123 aa12.01□□□□□ -0.49
TRAM1-205ENST00000521425 C10orf25Q5T742 122 aa12.01□□□□□ -0.49
TRAM1-205ENST00000521425 S100A7L2Q5SY68 101 aa12.01□□□□□ -0.49
TRAM1-205ENST00000521425 SPART-AS1P0CW21 52 aa12.01□□□□□ -0.49
TRAM1-205ENST00000521425 IGKV2-28A0A075B6P5 120 aa12□□□□□ -0.49
TRAM1-205ENST00000521425 IGKV2D-28P01615 120 aa12□□□□□ -0.49
TRAM1-205ENST00000521425 C1orf195Q5TG92 126 aa12□□□□□ -0.49
TRAM1-205ENST00000521425 Q6JHZ5 121 aa12□□□□□ -0.49
TRAM1-205ENST00000521425 Q6ZTC4 211 aa11.99□□□□□ -0.49
TRAM1-205ENST00000521425 NANOS2P60321 138 aaKnown RBP11.98□□□□□ -0.49
TRAM1-205ENST00000521425 RMI2Q96E14 147 aa11.98□□□□□ -0.49
TRAM1-205ENST00000521425 A0A087WZ39 114 aa11.97□□□□□ -0.49
TRAM1-205ENST00000521425 WFDC10BQ8IUB3 73 aa11.97□□□□□ -0.49
TRAM1-205ENST00000521425 TRAV13-2A0A0B4J235 113 aa11.96□□□□□ -0.49
TRAM1-205ENST00000521425 F8WDY8 70 aa11.96□□□□□ -0.49
TRAM1-205ENST00000521425 SPAG11BQ08648 103 aa11.96□□□□□ -0.49
TRAM1-205ENST00000521425 NDUFC2O95298 119 aa11.95□□□□□ -0.5
TRAM1-205ENST00000521425 COPS9Q8WXC6 57 aa11.95□□□□□ -0.5
TRAM1-205ENST00000521425 HAMPP81172 84 aa11.94□□□□□ -0.5
TRAM1-205ENST00000521425 IGKV2D-24A0A075B6R9 120 aa11.93□□□□□ -0.5
TRAM1-205ENST00000521425 F8WEM9 126 aa11.93□□□□□ -0.5
TRAM1-205ENST00000521425 A0A0J9YWU9 116 aa11.92□□□□□ -0.5
TRAM1-205ENST00000521425 TIMM17BO60830 172 aa11.92□□□□□ -0.5
TRAM1-205ENST00000521425 LAMTOR3Q9UHA4 124 aa11.92□□□□□ -0.5
TRAM1-205ENST00000521425 SERP1Q9Y6X1 66 aa11.92□□□□□ -0.5
TRAM1-205ENST00000521425 C6orf99Q4VX62 202 aa11.91□□□□□ -0.5
TRAM1-205ENST00000521425 CYSRT1A8MQ03 144 aa11.91□□□□□ -0.5
TRAM1-205ENST00000521425 Q8NAQ8 132 aa11.91□□□□□ -0.5
TRAM1-205ENST00000521425 KPRPQ5T749 579 aaPredicted RBP11.9□□□□□ -0.5
TRAM1-205ENST00000521425 KRTAP10-11P60412 298 aa11.9□□□□□ -0.51
TRAM1-205ENST00000521425 LYRM9A8MSI8 78 aa11.89□□□□□ -0.51
TRAM1-205ENST00000521425 FP248Q71RG6 208 aaPredicted RBP11.89□□□□□ -0.51
TRAM1-205ENST00000521425 KRTAP24-1Q3LI83 254 aa11.88□□□□□ -0.51
TRAM1-205ENST00000521425 IBA57-AS1B1ANH7 110 aa11.88□□□□□ -0.51
TRAM1-205ENST00000521425 ZNF561-AS1K7EIQ3 104 aa11.88□□□□□ -0.51
TRAM1-205ENST00000521425 CD164L2Q6UWJ8 174 aa11.87□□□□□ -0.51
TRAM1-205ENST00000521425 SCXQ7RTU7 201 aa11.87□□□□□ -0.51
TRAM1-205ENST00000521425 SMIM26A0A096LP01 95 aa11.87□□□□□ -0.51
TRAM1-205ENST00000521425 H7BZZ5 65 aa11.86□□□□□ -0.51
TRAM1-205ENST00000521425 Q8NDZ9 215 aa11.86□□□□□ -0.51
TRAM1-205ENST00000521425 UBL5Q9BZL1 73 aa11.85□□□□□ -0.51
TRAM1-205ENST00000521425 LYPD5Q6UWN5 251 aa11.85□□□□□ -0.51
TRAM1-205ENST00000521425 CAMK2N2Q96S95 79 aa11.84□□□□□ -0.51
TRAM1-205ENST00000521425 ORMDL1Q9P0S3 153 aa11.84□□□□□ -0.51
TRAM1-205ENST00000521425 TRBV7-6A0A0J9YX20 115 aa11.84□□□□□ -0.51
TRAM1-205ENST00000521425 LRCOL1A6NCL2 159 aa11.84□□□□□ -0.51
TRAM1-205ENST00000521425 TRAV10A0A0B4J240 114 aa11.83□□□□□ -0.52
TRAM1-205ENST00000521425 MIFP14174 115 aa11.83□□□□□ -0.52
TRAM1-205ENST00000521425 ANK2Q01484 3957 aa11.82□□□□□ -0.52
TRAM1-205ENST00000521425 DEFB131BA0A096LNP1 70 aa11.82□□□□□ -0.52
TRAM1-205ENST00000521425 DEFB105AQ8NG35 78 aa11.81□□□□□ -0.52
TRAM1-205ENST00000521425 NDUFC2-KCTD14E9PQ53 114 aa11.81□□□□□ -0.52
TRAM1-205ENST00000521425 CCKP06307 115 aa11.8□□□□□ -0.52
TRAM1-205ENST00000521425 Q8IZM0 81 aa11.8□□□□□ -0.52
TRAM1-205ENST00000521425 A0A1B0GUV1 79 aa11.79□□□□□ -0.52
TRAM1-205ENST00000521425 ESRGQ1W209 222 aa11.78□□□□□ -0.52
TRAM1-205ENST00000521425 C11orf45Q8TAV5 145 aa11.78□□□□□ -0.52
TRAM1-205ENST00000521425 KIAA0087Q14695 138 aa11.78□□□□□ -0.52
TRAM1-205ENST00000521425 LELP1Q5T871 98 aa11.77□□□□□ -0.53
TRAM1-205ENST00000521425 H0YGX0 51 aa11.77□□□□□ -0.53
TRAM1-205ENST00000521425 TRBV10-3A0A0K0K1G6 114 aa11.75□□□□□ -0.53
TRAM1-205ENST00000521425 SRRM2Q9UQ35 2752 aaKnown RBP11.74□□□□□ -0.53
TRAM1-205ENST00000521425 TRAV7A0A075B6U4 112 aa11.74□□□□□ -0.53
TRAM1-205ENST00000521425 FAM229BQ4G0N7 80 aa11.74□□□□□ -0.53
TRAM1-205ENST00000521425 Q6ZQY7 126 aa11.73□□□□□ -0.53
TRAM1-205ENST00000521425 RPL37AP8A6NKH3 93 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms