RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 FABP2P12104 132 aa6.51□□□□□ -1.37
TRIM35-204ENST00000521283 RPL39P62891 51 aaKnown RBP6.51□□□□□ -1.37
TRIM35-204ENST00000521283 SYCNQ0VAF6 134 aa6.51□□□□□ -1.37
TRIM35-204ENST00000521283 Q6ZUT4 128 aa6.51□□□□□ -1.37
TRIM35-204ENST00000521283 Q6ZVH6 145 aa6.51□□□□□ -1.37
TRIM35-204ENST00000521283 PLAC8Q9NZF1 115 aa6.51□□□□□ -1.37
TRIM35-204ENST00000521283 GAGE10A6NGK3 116 aa6.5□□□□□ -1.37
TRIM35-204ENST00000521283 K7ERU9 68 aa6.5□□□□□ -1.37
TRIM35-204ENST00000521283 RPL37AP61513 92 aaKnown RBP6.5□□□□□ -1.37
TRIM35-204ENST00000521283 COX6A2Q02221 97 aa6.5□□□□□ -1.37
TRIM35-204ENST00000521283 CEND1Q8N111 149 aa6.5□□□□□ -1.37
TRIM35-204ENST00000521283 LINC01561Q8N1V8 128 aa6.5□□□□□ -1.37
TRIM35-204ENST00000521283 C7orf33Q8WU49 177 aa6.5□□□□□ -1.37
TRIM35-204ENST00000521283 COPS9Q8WXC6 57 aa6.5□□□□□ -1.37
TRIM35-204ENST00000521283 TP73-AS1Q9UF72 201 aa6.5□□□□□ -1.37
TRIM35-204ENST00000521283 A0A087WYN8 130 aa6.49□□□□□ -1.37
TRIM35-204ENST00000521283 IGHV3OR16-9A0A0B4J2B5 98 aa6.49□□□□□ -1.37
TRIM35-204ENST00000521283 PLEKHB2Q96CS7 222 aa6.49□□□□□ -1.37
TRIM35-204ENST00000521283 CAMK2N2Q96S95 79 aa6.49□□□□□ -1.37
TRIM35-204ENST00000521283 SPANXB1Q9NS25 103 aaPredicted RBP6.49□□□□□ -1.37
TRIM35-204ENST00000521283 FLG2Q5D862 2391 aaPredicted RBP6.49□□□□□ -1.37
TRIM35-204ENST00000521283 LOC107984640A0A0U1RRK4 108 aa6.48□□□□□ -1.37
TRIM35-204ENST00000521283 A0A1B0GWB2 263 aa6.48□□□□□ -1.37
TRIM35-204ENST00000521283 KRTAP29-1A8MX34 341 aaPredicted RBP6.48□□□□□ -1.37
TRIM35-204ENST00000521283 J3QR89 54 aa6.48□□□□□ -1.37
TRIM35-204ENST00000521283 OXTP01178 125 aa6.48□□□□□ -1.37
TRIM35-204ENST00000521283 VCX2Q9H322 139 aa6.48□□□□□ -1.37
TRIM35-204ENST00000521283 CST9LQ9H4G1 147 aa6.48□□□□□ -1.37
TRIM35-204ENST00000521283 IGLV4-3A0A075B6K6 122 aa6.47□□□□□ -1.37
TRIM35-204ENST00000521283 A0A087WZ39 114 aa6.47□□□□□ -1.37
TRIM35-204ENST00000521283 RNASE13Q5GAN3 156 aaKnown RBP6.47□□□□□ -1.37
TRIM35-204ENST00000521283 C5orf38Q86SI9 138 aa6.47□□□□□ -1.37
TRIM35-204ENST00000521283 HIST1H4GQ99525 98 aa6.47□□□□□ -1.37
TRIM35-204ENST00000521283 MYCBP2O75592 4640 aa6.47□□□□□ -1.37
TRIM35-204ENST00000521283 A0A1W2PPM0 123 aa6.46□□□□□ -1.38
TRIM35-204ENST00000521283 K7EP34 96 aa6.46□□□□□ -1.38
TRIM35-204ENST00000521283 NDUFA1O15239 70 aa6.46□□□□□ -1.38
TRIM35-204ENST00000521283 KRTAP10-4P60372 401 aaPredicted RBP6.46□□□□□ -1.38
TRIM35-204ENST00000521283 SPAG11BQ08648 103 aa6.46□□□□□ -1.38
TRIM35-204ENST00000521283 SCGB1D4Q6XE38 83 aa6.46□□□□□ -1.38
TRIM35-204ENST00000521283 FAM19A3Q7Z5A8 133 aa6.46□□□□□ -1.38
TRIM35-204ENST00000521283 FAM104AQ969W3 186 aa6.46□□□□□ -1.38
TRIM35-204ENST00000521283 AMELXQ99217 191 aa6.46□□□□□ -1.38
TRIM35-204ENST00000521283 PPDPFQ9H3Y8 114 aa6.46□□□□□ -1.38
TRIM35-204ENST00000521283 IGKV2-24A0A0C4DH68 120 aa6.45□□□□□ -1.38
TRIM35-204ENST00000521283 TMEM238C9JI98 176 aa6.45□□□□□ -1.38
TRIM35-204ENST00000521283 F8W1H4 67 aa6.45□□□□□ -1.38
TRIM35-204ENST00000521283 PANO1I0J062 215 aa6.45□□□□□ -1.38
TRIM35-204ENST00000521283 HERVK_113P63121 156 aa6.45□□□□□ -1.38
TRIM35-204ENST00000521283 LINC00242Q5T6M2 205 aa6.45□□□□□ -1.38
TRIM35-204ENST00000521283 PCP2Q8IVA1 136 aa6.45□□□□□ -1.38
TRIM35-204ENST00000521283 TRBV20-1A0A075B6N2 111 aa6.44□□□□□ -1.38
TRIM35-204ENST00000521283 A0A096LNI7 61 aa6.44□□□□□ -1.38
TRIM35-204ENST00000521283 ZNF815PA8K554 130 aa6.44□□□□□ -1.38
TRIM35-204ENST00000521283 LEPROTO15243 131 aa6.44□□□□□ -1.38
TRIM35-204ENST00000521283 CHTF8P0CG12 524 aa6.44□□□□□ -1.38
TRIM35-204ENST00000521283 LGALS3P17931 250 aaKnown RBP6.44□□□□□ -1.38
TRIM35-204ENST00000521283 UBE2D1P51668 147 aa6.44□□□□□ -1.38
TRIM35-204ENST00000521283 SFTA2Q6UW10 78 aa6.44□□□□□ -1.38
TRIM35-204ENST00000521283 Q6ZRU5 148 aa6.44□□□□□ -1.38
TRIM35-204ENST00000521283 OPRPNQ99935 248 aaPredicted RBP6.44□□□□□ -1.38
TRIM35-204ENST00000521283 A0A0J9YXY3 114 aa6.43□□□□□ -1.38
TRIM35-204ENST00000521283 TRBV30A0A0K0K1B3 111 aa6.43□□□□□ -1.38
TRIM35-204ENST00000521283 TLX1NBP0CAT3 122 aa6.43□□□□□ -1.38
TRIM35-204ENST00000521283 RPL24P83731 157 aaKnown RBP6.43□□□□□ -1.38
TRIM35-204ENST00000521283 SRSF9Q13242 221 aaKnown RBP eCLIP6.43□□□□□ -1.38
TRIM35-204ENST00000521283 IGKV2D-26A0A0A0MRZ7 120 aa6.42□□□□□ -1.38
TRIM35-204ENST00000521283 TINCRA0A1B0GVN0 87 aa6.42□□□□□ -1.38
TRIM35-204ENST00000521283 TIMM17BO60830 172 aa6.42□□□□□ -1.38
TRIM35-204ENST00000521283 PRSS2P07478 247 aa6.42□□□□□ -1.38
TRIM35-204ENST00000521283 LINC00526Q96FQ7 95 aa6.42□□□□□ -1.38
TRIM35-204ENST00000521283 KRTAP9-8Q9BYQ0 159 aa6.42□□□□□ -1.38
TRIM35-204ENST00000521283 GEMIN7Q9H840 131 aaKnown RBP6.42□□□□□ -1.38
TRIM35-204ENST00000521283 SPCS1Q9Y6A9 102 aa6.42□□□□□ -1.38
TRIM35-204ENST00000521283 H3BUT2 72 aa6.41□□□□□ -1.38
TRIM35-204ENST00000521283 J3QQQ9 107 aa6.41□□□□□ -1.38
TRIM35-204ENST00000521283 IFITM1P13164 125 aa6.41□□□□□ -1.38
TRIM35-204ENST00000521283 GAGE2BQ13066 116 aa6.41□□□□□ -1.38
TRIM35-204ENST00000521283 TMEM170BQ5T4T1 132 aa6.41□□□□□ -1.38
TRIM35-204ENST00000521283 TMEM223A0PJW6 202 aa6.4□□□□□ -1.38
TRIM35-204ENST00000521283 M0QXV9 152 aa6.4□□□□□ -1.38
TRIM35-204ENST00000521283 CXCL5P42830 114 aa6.4□□□□□ -1.38
TRIM35-204ENST00000521283 RPL18AQ02543 176 aaKnown RBP6.4□□□□□ -1.38
TRIM35-204ENST00000521283 Q6ZRP5 223 aa6.4□□□□□ -1.38
TRIM35-204ENST00000521283 Q8IZM0 81 aa6.4□□□□□ -1.38
TRIM35-204ENST00000521283 NHP2Q9NX24 153 aaKnown RBP6.4□□□□□ -1.38
TRIM35-204ENST00000521283 HERC1Q15751 4861 aa6.39□□□□□ -1.39
TRIM35-204ENST00000521283 A0A0B4J2C4 111 aa6.39□□□□□ -1.39
TRIM35-204ENST00000521283 FXYD2P54710 66 aa6.39□□□□□ -1.39
TRIM35-204ENST00000521283 CKS1BP61024 79 aa6.39□□□□□ -1.39
TRIM35-204ENST00000521283 KIAA0087Q14695 138 aa6.39□□□□□ -1.39
TRIM35-204ENST00000521283 OCIAD2Q56VL3 154 aa6.39□□□□□ -1.39
TRIM35-204ENST00000521283 C6orf226Q5I0X4 101 aa6.39□□□□□ -1.39
TRIM35-204ENST00000521283 IGLV5-45A0A087WSX0 123 aa6.38□□□□□ -1.39
TRIM35-204ENST00000521283 NDUFC2-KCTD14E9PQ53 114 aa6.38□□□□□ -1.39
TRIM35-204ENST00000521283 PRR3P79522 188 aaKnown RBP6.38□□□□□ -1.39
TRIM35-204ENST00000521283 SERTAD4-AS1Q5TG53 156 aa6.38□□□□□ -1.39
TRIM35-204ENST00000521283 UNQ6190/PRO20217Q6UXQ8 127 aa6.38□□□□□ -1.39
TRIM35-204ENST00000521283 HERV-K104P63124 156 aa6.37□□□□□ -1.39
TRIM35-204ENST00000521283 C9orf116Q5BN46 136 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms