RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 SMIM26A0A096LP01 95 aa3.1□□□□□ -1.91
SDCBP-207ENST00000520168 TRBV7-6A0A0J9YX20 115 aa3.1□□□□□ -1.91
SDCBP-207ENST00000520168 LINC01546A6NGU7 62 aa3.1□□□□□ -1.91
SDCBP-207ENST00000520168 NDUFS5O43920 106 aa3.1□□□□□ -1.91
SDCBP-207ENST00000520168 LEPROTL1O95214 131 aa3.1□□□□□ -1.91
SDCBP-207ENST00000520168 PPP1R17O96001 155 aa3.1□□□□□ -1.91
SDCBP-207ENST00000520168 CRYGAP11844 174 aa3.1□□□□□ -1.91
SDCBP-207ENST00000520168 S100A4P26447 101 aaKnown RBP3.1□□□□□ -1.91
SDCBP-207ENST00000520168 SRSF9Q13242 221 aaKnown RBP eCLIP3.1□□□□□ -1.91
SDCBP-207ENST00000520168 MRPL51Q4U2R6 128 aaKnown RBP3.1□□□□□ -1.91
SDCBP-207ENST00000520168 SPINK6Q6UWN8 80 aa3.1□□□□□ -1.91
SDCBP-207ENST00000520168 AMN1Q8IY45 258 aa3.1□□□□□ -1.91
SDCBP-207ENST00000520168 FAM19A2Q8N3H0 131 aa3.1□□□□□ -1.91
SDCBP-207ENST00000520168 DPH3Q96FX2 82 aa3.1□□□□□ -1.91
SDCBP-207ENST00000520168 URB1-AS1Q96HZ7 61 aa3.1□□□□□ -1.91
SDCBP-207ENST00000520168 NXT2Q9NPJ8 142 aaKnown RBP3.1□□□□□ -1.91
SDCBP-207ENST00000520168 SPCS1Q9Y6A9 102 aa3.1□□□□□ -1.91
SDCBP-207ENST00000520168 TRBV20-1A0A075B6N2 111 aa3.09□□□□□ -1.91
SDCBP-207ENST00000520168 IGHV1-24A0A0C4DH33 117 aa3.09□□□□□ -1.91
SDCBP-207ENST00000520168 D6R8Y8 96 aa3.09□□□□□ -1.91
SDCBP-207ENST00000520168 SYS1-DBNDD2H3BUS1 97 aa3.09□□□□□ -1.91
SDCBP-207ENST00000520168 IFI27P40305 119 aaPredicted RBP3.09□□□□□ -1.91
SDCBP-207ENST00000520168 MRPS36P82909 103 aaKnown RBP3.09□□□□□ -1.91
SDCBP-207ENST00000520168 PRR9Q5T870 116 aa3.09□□□□□ -1.91
SDCBP-207ENST00000520168 SPANXN1Q5VSR9 72 aa3.09□□□□□ -1.91
SDCBP-207ENST00000520168 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
SDCBP-207ENST00000520168 UBE2WQ96B02 151 aa3.09□□□□□ -1.91
SDCBP-207ENST00000520168 KIF25-AS1Q9Y6Z4 181 aa3.09□□□□□ -1.91
SDCBP-207ENST00000520168 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.08□□□□□ -1.92
SDCBP-207ENST00000520168 IGHV3-16A0A0C4DH30 117 aa3.08□□□□□ -1.92
SDCBP-207ENST00000520168 FAM236AA0A1B0GUQ0 79 aa3.08□□□□□ -1.92
SDCBP-207ENST00000520168 FAM236BA0A1B0GV22 79 aa3.08□□□□□ -1.92
SDCBP-207ENST00000520168 A0A1W2PPM0 123 aa3.08□□□□□ -1.92
SDCBP-207ENST00000520168 H3BMG7 143 aa3.08□□□□□ -1.92
SDCBP-207ENST00000520168 PANO1I0J062 215 aa3.08□□□□□ -1.92
SDCBP-207ENST00000520168 K7EMI3 77 aa3.08□□□□□ -1.92
SDCBP-207ENST00000520168 CRPP02741 224 aa3.08□□□□□ -1.92
SDCBP-207ENST00000520168 MT-ATP8P03928 68 aa3.08□□□□□ -1.92
SDCBP-207ENST00000520168 LGALS3P17931 250 aaKnown RBP3.08□□□□□ -1.92
SDCBP-207ENST00000520168 FCER1GP30273 86 aa3.08□□□□□ -1.92
SDCBP-207ENST00000520168 CNBPP62633 177 aaKnown RBP3.08□□□□□ -1.92
SDCBP-207ENST00000520168 PRR3P79522 188 aaKnown RBP3.08□□□□□ -1.92
SDCBP-207ENST00000520168 MUC21Q5SSG8 566 aa3.08□□□□□ -1.92
SDCBP-207ENST00000520168 BVES-AS1Q5T3Y7 98 aa3.08□□□□□ -1.92
SDCBP-207ENST00000520168 SDIM1Q6ZPB5 146 aa3.08□□□□□ -1.92
SDCBP-207ENST00000520168 Q8N8P6 123 aa3.08□□□□□ -1.92
SDCBP-207ENST00000520168 BRK1Q8WUW1 75 aa3.08□□□□□ -1.92
SDCBP-207ENST00000520168 C20orf78Q9BR46 151 aa3.08□□□□□ -1.92
SDCBP-207ENST00000520168 KLK12Q9UKR0 248 aa3.08□□□□□ -1.92
SDCBP-207ENST00000520168 PHLDA3Q9Y5J5 127 aa3.08□□□□□ -1.92
SDCBP-207ENST00000520168 IGHV3-64A0A075B6Q5 118 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 A0A087WYN8 130 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 IGHV3OR16-9A0A0B4J2B5 98 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 IGHV1-58A0A0C4DH39 117 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 MUC21A0A0G2JKD1 596 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 MUC21A0A140T8X8 626 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 LOC389332A0A1B0GUA5 103 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 LINC01549A6NIU2 74 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 H3BVH4 76 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 M0R381 172 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 NPYP01303 97 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 HBDP02042 147 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 PRSS1P07477 247 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 NMUP48645 174 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 MIAQ16674 131 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 ZNF876PQ49A33 203 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 CFAP126Q5VTH2 177 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 ZFP2Q6ZN57 461 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 KTN1-AS1Q86SY8 53 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 SPACA4Q8TDM5 124 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 PPDPFLQ8WWR9 84 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 IFI27L1Q96BM0 104 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 PLAC8Q9NZF1 115 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 RBM12B-AS1Q9P1G2 102 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 SERP1Q9Y6X1 66 aa3.07□□□□□ -1.92
SDCBP-207ENST00000520168 C8orf87E5RJ46 101 aa3.06□□□□□ -1.92
SDCBP-207ENST00000520168 GNRH2O43555 120 aa3.06□□□□□ -1.92
SDCBP-207ENST00000520168 RNASE3P12724 160 aaKnown RBP3.06□□□□□ -1.92
SDCBP-207ENST00000520168 NPC2P61916 151 aa3.06□□□□□ -1.92
SDCBP-207ENST00000520168 ORMDL2Q53FV1 153 aa3.06□□□□□ -1.92
SDCBP-207ENST00000520168 Q6ZQT7 251 aa3.06□□□□□ -1.92
SDCBP-207ENST00000520168 NRACQ8N912 160 aa3.06□□□□□ -1.92
SDCBP-207ENST00000520168 C2orf48Q96LS8 159 aa3.06□□□□□ -1.92
SDCBP-207ENST00000520168 CARD19Q96LW7 228 aa3.06□□□□□ -1.92
SDCBP-207ENST00000520168 PSORS1C2Q9UIG4 136 aa3.06□□□□□ -1.92
SDCBP-207ENST00000520168 A0A096LNJ9 63 aa3.05□□□□□ -1.92
SDCBP-207ENST00000520168 hDV102S1A0JD36 115 aa3.05□□□□□ -1.92
SDCBP-207ENST00000520168 H0Y9J4 135 aa3.05□□□□□ -1.92
SDCBP-207ENST00000520168 H3BT86 120 aa3.05□□□□□ -1.92
SDCBP-207ENST00000520168 ATP5EP56381 51 aaPredicted RBP3.05□□□□□ -1.92
SDCBP-207ENST00000520168 LINC00173Q6ZV60 143 aa3.05□□□□□ -1.92
SDCBP-207ENST00000520168 NOTCH2NLQ7Z3S9 236 aa3.05□□□□□ -1.92
SDCBP-207ENST00000520168 CRCT1Q9UGL9 99 aa3.05□□□□□ -1.92
SDCBP-207ENST00000520168 IGHV3-73A0A0B4J1V6 119 aa3.04□□□□□ -1.92
SDCBP-207ENST00000520168 TRBV6-5A0A0K0K1A5 114 aa3.04□□□□□ -1.92
SDCBP-207ENST00000520168 E9PLD3 99 aa3.04□□□□□ -1.92
SDCBP-207ENST00000520168 SCGB1C2P0DMR2 95 aa3.04□□□□□ -1.92
SDCBP-207ENST00000520168 COX7CP15954 63 aa3.04□□□□□ -1.92
SDCBP-207ENST00000520168 MP68P56378 58 aa3.04□□□□□ -1.92
SDCBP-207ENST00000520168 ENHOQ6UWT2 76 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms