RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 LOC107984640A0A0U1RRK4 108 aa11.19□□□□□ -0.62
PCDHGA11-202ENST00000518882 FAM19A1Q7Z5A9 133 aa11.18□□□□□ -0.62
PCDHGA11-202ENST00000518882 Q8NAQ8 132 aa11.18□□□□□ -0.62
PCDHGA11-202ENST00000518882 HTN3P15516 51 aa11.18□□□□□ -0.62
PCDHGA11-202ENST00000518882 LYPD5Q6UWN5 251 aa11.18□□□□□ -0.62
PCDHGA11-202ENST00000518882 C9orf66Q5T8R8 295 aa11.17□□□□□ -0.62
PCDHGA11-202ENST00000518882 A0A0J9YWU9 116 aa11.16□□□□□ -0.62
PCDHGA11-202ENST00000518882 IGLV6-57P01721 117 aa11.16□□□□□ -0.62
PCDHGA11-202ENST00000518882 IGHV4-30-4P0DP06 118 aa11.16□□□□□ -0.62
PCDHGA11-202ENST00000518882 ENHOQ6UWT2 76 aa11.16□□□□□ -0.62
PCDHGA11-202ENST00000518882 KLK12Q9UKR0 248 aa11.16□□□□□ -0.62
PCDHGA11-202ENST00000518882 M0R2N4 97 aa11.16□□□□□ -0.62
PCDHGA11-202ENST00000518882 Q6ZQT0 140 aa11.16□□□□□ -0.62
PCDHGA11-202ENST00000518882 TRRAPQ9Y4A5 3859 aa11.16□□□□□ -0.62
PCDHGA11-202ENST00000518882 LELP1Q5T871 98 aa11.15□□□□□ -0.62
PCDHGA11-202ENST00000518882 ATP5EP2Q5VTU8 51 aa11.15□□□□□ -0.62
PCDHGA11-202ENST00000518882 APOC4P55056 127 aa11.15□□□□□ -0.62
PCDHGA11-202ENST00000518882 PRR34Q9NV39 138 aa11.15□□□□□ -0.62
PCDHGA11-202ENST00000518882 NOTCH2Q04721 2471 aa11.14□□□□□ -0.63
PCDHGA11-202ENST00000518882 TRAV23DV6A0A075B6W5 121 aa11.14□□□□□ -0.63
PCDHGA11-202ENST00000518882 RBM3P98179 157 aaKnown RBP11.14□□□□□ -0.63
PCDHGA11-202ENST00000518882 ZNF561-AS1K7EIQ3 104 aa11.14□□□□□ -0.63
PCDHGA11-202ENST00000518882 UBL5Q9BZL1 73 aa11.14□□□□□ -0.63
PCDHGA11-202ENST00000518882 OTOGQ6ZRI0 2925 aa11.13□□□□□ -0.63
PCDHGA11-202ENST00000518882 Q6ZQY7 126 aa11.12□□□□□ -0.63
PCDHGA11-202ENST00000518882 LAMTOR3Q9UHA4 124 aa11.12□□□□□ -0.63
PCDHGA11-202ENST00000518882 C6orf48Q9UBA6 75 aa11.12□□□□□ -0.63
PCDHGA11-202ENST00000518882 TRBV10-3A0A0K0K1G6 114 aa11.11□□□□□ -0.63
PCDHGA11-202ENST00000518882 MIFP14174 115 aa11.11□□□□□ -0.63
PCDHGA11-202ENST00000518882 MUC7Q8TAX7 377 aa11.11□□□□□ -0.63
PCDHGA11-202ENST00000518882 XAGE1AQ9HD64 81 aa11.11□□□□□ -0.63
PCDHGA11-202ENST00000518882 LOC110117498A0A087WWA1 95 aa11.11□□□□□ -0.63
PCDHGA11-202ENST00000518882 GHRHP01286 108 aa11.11□□□□□ -0.63
PCDHGA11-202ENST00000518882 ATRQ13535 2644 aa11.1□□□□□ -0.63
PCDHGA11-202ENST00000518882 J3KT08 172 aa11.1□□□□□ -0.63
PCDHGA11-202ENST00000518882 SPART-AS1P0CW21 52 aa11.1□□□□□ -0.63
PCDHGA11-202ENST00000518882 NSD1Q96L73 2696 aaPredicted RBP11.1□□□□□ -0.63
PCDHGA11-202ENST00000518882 GVQW2A0A096LPI5 108 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA11-202ENST00000518882 TMEM258P61165 79 aa11.07□□□□□ -0.64
PCDHGA11-202ENST00000518882 TEP1Q99973 2627 aaKnown RBP11.07□□□□□ -0.64
PCDHGA11-202ENST00000518882 PKD1L1Q8TDX9 2849 aa11.06□□□□□ -0.64
PCDHGA11-202ENST00000518882 DIRC1Q969H9 104 aa11.05□□□□□ -0.64
PCDHGA11-202ENST00000518882 DPH3Q96FX2 82 aa11.05□□□□□ -0.64
PCDHGA11-202ENST00000518882 DSCR8Q96T75 97 aa11.05□□□□□ -0.64
PCDHGA11-202ENST00000518882 HECTD1Q9ULT8 2610 aa11.05□□□□□ -0.64
PCDHGA11-202ENST00000518882 LINC01547P58512 204 aaPredicted RBP11.05□□□□□ -0.64
PCDHGA11-202ENST00000518882 Q6ZVQ6 151 aa11.05□□□□□ -0.64
PCDHGA11-202ENST00000518882 FAM19A5Q7Z5A7 132 aaPredicted RBP11.05□□□□□ -0.64
PCDHGA11-202ENST00000518882 RPS28P62857 69 aaKnown RBP11.04□□□□□ -0.64
PCDHGA11-202ENST00000518882 HIGD2BQ4VC39 106 aa11.04□□□□□ -0.64
PCDHGA11-202ENST00000518882 ZNF73O43830 326 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA11-202ENST00000518882 INAFM1C9JVW0 142 aa11.02□□□□□ -0.64
PCDHGA11-202ENST00000518882 HAMPP81172 84 aa11.02□□□□□ -0.64
PCDHGA11-202ENST00000518882 WFDC10BQ8IUB3 73 aa11.02□□□□□ -0.64
PCDHGA11-202ENST00000518882 OXTP01178 125 aa11.01□□□□□ -0.65
PCDHGA11-202ENST00000518882 VPREB1P12018 145 aa11.01□□□□□ -0.65
PCDHGA11-202ENST00000518882 COX7BP24311 80 aa11.01□□□□□ -0.65
PCDHGA11-202ENST00000518882 ELOF1P60002 83 aaKnown RBP11.01□□□□□ -0.65
PCDHGA11-202ENST00000518882 J3QKU1 62 aa11□□□□□ -0.65
PCDHGA11-202ENST00000518882 KRTAP26-1Q6PEX3 210 aa11□□□□□ -0.65
PCDHGA11-202ENST00000518882 C20orf197Q8N268 126 aa11□□□□□ -0.65
PCDHGA11-202ENST00000518882 CAMK2N2Q96S95 79 aa11□□□□□ -0.65
PCDHGA11-202ENST00000518882 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.99□□□□□ -0.65
PCDHGA11-202ENST00000518882 TRBV7-4A0A0J9YYF1 115 aa10.98□□□□□ -0.65
PCDHGA11-202ENST00000518882 PDE6GP18545 87 aa10.98□□□□□ -0.65
PCDHGA11-202ENST00000518882 Q6ZRU5 148 aa10.98□□□□□ -0.65
PCDHGA11-202ENST00000518882 TRAV10A0A0B4J240 114 aa10.97□□□□□ -0.65
PCDHGA11-202ENST00000518882 H3BQ85 93 aa10.97□□□□□ -0.65
PCDHGA11-202ENST00000518882 C15orf56Q8N910 161 aa10.96□□□□□ -0.65
PCDHGA11-202ENST00000518882 KMT2BQ9UMN6 2715 aaPredicted RBP10.96□□□□□ -0.65
PCDHGA11-202ENST00000518882 KPRPQ5T749 579 aaPredicted RBP10.96□□□□□ -0.66
PCDHGA11-202ENST00000518882 RETNQ9HD89 108 aa10.96□□□□□ -0.66
PCDHGA11-202ENST00000518882 CXCL6P80162 114 aa10.95□□□□□ -0.66
PCDHGA11-202ENST00000518882 EGFEM1PQ0D2K5 195 aa10.95□□□□□ -0.66
PCDHGA11-202ENST00000518882 SCXQ7RTU7 201 aa10.95□□□□□ -0.66
PCDHGA11-202ENST00000518882 TRAV7A0A075B6U4 112 aa10.93□□□□□ -0.66
PCDHGA11-202ENST00000518882 TRBV7-6A0A0J9YX20 115 aa10.93□□□□□ -0.66
PCDHGA11-202ENST00000518882 ANK2Q01484 3957 aa10.93□□□□□ -0.66
PCDHGA11-202ENST00000518882 M0R378 163 aa10.93□□□□□ -0.66
PCDHGA11-202ENST00000518882 TENM3Q9P273 2699 aa10.93□□□□□ -0.66
PCDHGA11-202ENST00000518882 NDUFC2-KCTD14E9PQ53 114 aa10.92□□□□□ -0.66
PCDHGA11-202ENST00000518882 LINC00528Q8N1L1 170 aa10.92□□□□□ -0.66
PCDHGA11-202ENST00000518882 BCE1O60756 84 aa10.91□□□□□ -0.66
PCDHGA11-202ENST00000518882 Q6ZRP5 223 aa10.91□□□□□ -0.66
PCDHGA11-202ENST00000518882 Q6ZTC4 211 aa10.91□□□□□ -0.66
PCDHGA11-202ENST00000518882 WIPF1O43516 503 aa10.91□□□□□ -0.66
PCDHGA11-202ENST00000518882 H7BZZ5 65 aa10.89□□□□□ -0.67
PCDHGA11-202ENST00000518882 ESRGQ1W209 222 aa10.89□□□□□ -0.67
PCDHGA11-202ENST00000518882 H3BNG1 76 aa10.88□□□□□ -0.67
PCDHGA11-202ENST00000518882 SNURFQ9Y675 71 aa10.86□□□□□ -0.67
PCDHGA11-202ENST00000518882 OXLD1Q5BKU9 147 aa10.86□□□□□ -0.67
PCDHGA11-202ENST00000518882 FAM236DA0A1B0GTK5 79 aa10.85□□□□□ -0.67
PCDHGA11-202ENST00000518882 FAM236CP0DP71 79 aa10.85□□□□□ -0.67
PCDHGA11-202ENST00000518882 KLKP1Q107X0 134 aa10.85□□□□□ -0.67
PCDHGA11-202ENST00000518882 TM2D3Q9BRN9 247 aa10.85□□□□□ -0.67
PCDHGA11-202ENST00000518882 C1orf43Q9BWL3 253 aa10.85□□□□□ -0.67
PCDHGA11-202ENST00000518882 RMI2Q96E14 147 aa10.84□□□□□ -0.67
PCDHGA11-202ENST00000518882 KRTAP10-11P60412 298 aa10.84□□□□□ -0.67
PCDHGA11-202ENST00000518882 IGKV2D-24A0A075B6R9 120 aa10.83□□□□□ -0.68
PCDHGA11-202ENST00000518882 Q5XG85 94 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms