RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 IFT140Q96RY7 1462 aa-0.25□□□□□ -2.45
SKP1-203ENST00000517625 ALS2Q96Q42 1657 aa-0.25□□□□□ -2.45
SKP1-203ENST00000517625 USF3Q68DE3 2245 aa-0.25□□□□□ -2.45
SKP1-203ENST00000517625 KIAA1551Q9HCM1 1747 aa-0.26□□□□□ -2.45
SKP1-203ENST00000517625 SCN7AQ01118 1682 aa-0.26□□□□□ -2.45
SKP1-203ENST00000517625 SCRIBQ14160 1630 aa-0.26□□□□□ -2.45
SKP1-203ENST00000517625 MYO3AQ8NEV4 1616 aa-0.26□□□□□ -2.45
SKP1-203ENST00000517625 CCDC88BA6NC98 1476 aa-0.26□□□□□ -2.45
SKP1-203ENST00000517625 PZPP20742 1482 aa-0.26□□□□□ -2.45
SKP1-203ENST00000517625 PIGBOS1A0A0B4J2F0 54 aa-0.26□□□□□ -2.45
SKP1-203ENST00000517625 FAM92AA1XBS5 289 aa-0.26□□□□□ -2.45
SKP1-203ENST00000517625 KRTAP8-1Q8IUC2 63 aa-0.26□□□□□ -2.45
SKP1-203ENST00000517625 SPTSSBQ8NFR3 76 aa-0.26□□□□□ -2.45
SKP1-203ENST00000517625 TSTD1Q8NFU3 115 aa-0.26□□□□□ -2.45
SKP1-203ENST00000517625 PRO0255Q9UI72 69 aa-0.26□□□□□ -2.45
SKP1-203ENST00000517625 LINC00312Q9Y6C7 94 aa-0.26□□□□□ -2.45
SKP1-203ENST00000517625 SIPA1L3O60292 1781 aaPredicted RBP-0.27□□□□□ -2.45
SKP1-203ENST00000517625 XRN1Q8IZH2 1706 aaKnown RBP-0.27□□□□□ -2.45
SKP1-203ENST00000517625 CCDC18Q5T9S5 1454 aa-0.27□□□□□ -2.45
SKP1-203ENST00000517625 ZNF518AQ6AHZ1 1483 aa-0.27□□□□□ -2.45
SKP1-203ENST00000517625 SIX6O95475 246 aa-0.27□□□□□ -2.45
SKP1-203ENST00000517625 WFDC2Q14508 124 aa-0.27□□□□□ -2.45
SKP1-203ENST00000517625 SMCO1Q147U7 214 aa-0.27□□□□□ -2.45
SKP1-203ENST00000517625 SDF2Q99470 211 aa-0.27□□□□□ -2.45
SKP1-203ENST00000517625 TPT1P8Q9HAU6 139 aa-0.27□□□□□ -2.45
SKP1-203ENST00000517625 SBF2Q86WG5 1849 aa-0.27□□□□□ -2.45
SKP1-203ENST00000517625 DEPDC5O75140 1603 aa-0.27□□□□□ -2.45
SKP1-203ENST00000517625 DNAJC13O75165 2243 aa-0.28□□□□□ -2.45
SKP1-203ENST00000517625 SAMD9LQ8IVG5 1584 aa-0.28□□□□□ -2.45
SKP1-203ENST00000517625 CDK5RAP2Q96SN8 1893 aa-0.28□□□□□ -2.45
SKP1-203ENST00000517625 M0R3E3 92 aa-0.28□□□□□ -2.45
SKP1-203ENST00000517625 CFAP126Q5VTH2 177 aa-0.28□□□□□ -2.45
SKP1-203ENST00000517625 COPS9Q8WXC6 57 aa-0.28□□□□□ -2.45
SKP1-203ENST00000517625 PFDN5Q99471 154 aa-0.28□□□□□ -2.45
SKP1-203ENST00000517625 R4GMQ9 66 aa-0.28□□□□□ -2.45
SKP1-203ENST00000517625 C4AP0C0L4 1744 aa-0.28□□□□□ -2.45
SKP1-203ENST00000517625 C4BP0C0L5 1744 aa-0.28□□□□□ -2.45
SKP1-203ENST00000517625 DDX60LQ5H9U9 1706 aaKnown RBP-0.28□□□□□ -2.45
SKP1-203ENST00000517625 PLXNC1O60486 1568 aa-0.28□□□□□ -2.45
SKP1-203ENST00000517625 MROH2BQ7Z745 1585 aa-0.28□□□□□ -2.45
SKP1-203ENST00000517625 ATP10BO94823 1461 aa-0.29□□□□□ -2.46
SKP1-203ENST00000517625 NRAPQ86VF7 1730 aa-0.29□□□□□ -2.46
SKP1-203ENST00000517625 DOCK11Q5JSL3 2073 aa-0.29□□□□□ -2.46
SKP1-203ENST00000517625 SPAARA0A1B0GVQ0 90 aa-0.29□□□□□ -2.46
SKP1-203ENST00000517625 M0R2T5 61 aa-0.29□□□□□ -2.46
SKP1-203ENST00000517625 CCL18P55774 89 aa-0.29□□□□□ -2.46
SKP1-203ENST00000517625 DPH3Q96FX2 82 aa-0.29□□□□□ -2.46
SKP1-203ENST00000517625 SEC11CQ9BY50 192 aa-0.29□□□□□ -2.46
SKP1-203ENST00000517625 SPCS1Q9Y6A9 102 aa-0.29□□□□□ -2.46
SKP1-203ENST00000517625 LOC105371267A0A1B0GV96 52 aa-0.3□□□□□ -2.46
SKP1-203ENST00000517625 S100A3P33764 101 aa-0.3□□□□□ -2.46
SKP1-203ENST00000517625 C12orf73Q69YU5 71 aa-0.3□□□□□ -2.46
SKP1-203ENST00000517625 SMIM4Q8WVI0 70 aa-0.3□□□□□ -2.46
SKP1-203ENST00000517625 SCN3BQ9NY72 215 aa-0.3□□□□□ -2.46
SKP1-203ENST00000517625 PARP14Q460N5 1801 aa-0.3□□□□□ -2.46
SKP1-203ENST00000517625 MYO5CQ9NQX4 1742 aa-0.3□□□□□ -2.46
SKP1-203ENST00000517625 CASKIN1Q8WXD9 1431 aa-0.3□□□□□ -2.46
SKP1-203ENST00000517625 KIF1AQ12756 1690 aa-0.3□□□□□ -2.46
SKP1-203ENST00000517625 MYH13Q9UKX3 1938 aa-0.3□□□□□ -2.46
SKP1-203ENST00000517625 TRAV22A0A0B4J277 110 aa-0.31□□□□□ -2.46
SKP1-203ENST00000517625 S100A7L2Q5SY68 101 aa-0.31□□□□□ -2.46
SKP1-203ENST00000517625 ABCC3O15438 1527 aa-0.32□□□□□ -2.46
SKP1-203ENST00000517625 MON2Q7Z3U7 1717 aa-0.32□□□□□ -2.46
SKP1-203ENST00000517625 HCG22E2RYF7 251 aa-0.32□□□□□ -2.46
SKP1-203ENST00000517625 PPP1R17O96001 155 aa-0.32□□□□□ -2.46
SKP1-203ENST00000517625 MT1HL1P0DM35 61 aa-0.32□□□□□ -2.46
SKP1-203ENST00000517625 DEFB109BQ30KR1 87 aa-0.32□□□□□ -2.46
SKP1-203ENST00000517625 AQP10Q96PS8 301 aa-0.32□□□□□ -2.46
SKP1-203ENST00000517625 NPVFQ9HCQ7 196 aa-0.32□□□□□ -2.46
SKP1-203ENST00000517625 BTAF1O14981 1849 aa-0.32□□□□□ -2.46
SKP1-203ENST00000517625 BCORQ6W2J9 1755 aa-0.32□□□□□ -2.46
SKP1-203ENST00000517625 CDC42BPAQ5VT25 1732 aa-0.33□□□□□ -2.46
SKP1-203ENST00000517625 IFT172Q9UG01 1749 aa-0.33□□□□□ -2.46
SKP1-203ENST00000517625 TRAV13-2A0A0B4J235 113 aa-0.33□□□□□ -2.46
SKP1-203ENST00000517625 MT1BP07438 61 aa-0.33□□□□□ -2.46
SKP1-203ENST00000517625 Q8IZM0 81 aa-0.33□□□□□ -2.46
SKP1-203ENST00000517625 DEFB104AQ8WTQ1 72 aa-0.33□□□□□ -2.46
SKP1-203ENST00000517625 LENEPQ9Y5L5 61 aa-0.33□□□□□ -2.46
SKP1-203ENST00000517625 NWD2Q9ULI1 1742 aa-0.33□□□□□ -2.46
SKP1-203ENST00000517625 AGLP35573 1532 aa-0.33□□□□□ -2.46
SKP1-203ENST00000517625 LMO7Q8WWI1 1683 aa-0.33□□□□□ -2.46
SKP1-203ENST00000517625 PATJQ8NI35 1801 aa-0.34□□□□□ -2.46
SKP1-203ENST00000517625 M0R135 149 aa-0.34□□□□□ -2.46
SKP1-203ENST00000517625 ARPC4P59998 168 aa-0.34□□□□□ -2.46
SKP1-203ENST00000517625 MYOM3Q5VTT5 1437 aa-0.34□□□□□ -2.46
SKP1-203ENST00000517625 ABCC6O95255 1503 aa-0.34□□□□□ -2.46
SKP1-203ENST00000517625 SELENOWP63302 87 aa-0.35□□□□□ -2.47
SKP1-203ENST00000517625 KRTAP19-2Q3LHN2 52 aa-0.35□□□□□ -2.47
SKP1-203ENST00000517625 C10orf128Q5T292 105 aa-0.35□□□□□ -2.47
SKP1-203ENST00000517625 AGPAT4-IT1Q9H0P7 198 aa-0.35□□□□□ -2.47
SKP1-203ENST00000517625 LMTK2Q8IWU2 1503 aa-0.35□□□□□ -2.47
SKP1-203ENST00000517625 A2ML1A8K2U0 1454 aa-0.35□□□□□ -2.47
SKP1-203ENST00000517625 POLA1P09884 1462 aaPredicted RBP-0.35□□□□□ -2.47
SKP1-203ENST00000517625 HFM1A2PYH4 1435 aa-0.36□□□□□ -2.47
SKP1-203ENST00000517625 TROQ12816 1431 aaPredicted RBP-0.36□□□□□ -2.47
SKP1-203ENST00000517625 TRPM2O94759 1503 aa-0.36□□□□□ -2.47
SKP1-203ENST00000517625 LYNX1G3V0Z9 82 aa-0.36□□□□□ -2.47
SKP1-203ENST00000517625 SPAG11BQ08648 103 aa-0.36□□□□□ -2.47
SKP1-203ENST00000517625 COX17Q14061 63 aa-0.36□□□□□ -2.47
SKP1-203ENST00000517625 SPAG11AQ6PDA7 123 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms