RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 MAJINQ3KP22 176 aa3.7□□□□□ -1.82
SCARNA6.1-201ENST00000516989 LINC00518Q8N0U6 118 aa3.7□□□□□ -1.82
SCARNA6.1-201ENST00000516989 C6orf48Q9UBA6 75 aa3.7□□□□□ -1.82
SCARNA6.1-201ENST00000516989 PKIGQ9Y2B9 76 aa3.7□□□□□ -1.82
SCARNA6.1-201ENST00000516989 LRP1BQ9NZR2 4599 aa3.69□□□□□ -1.82
SCARNA6.1-201ENST00000516989 A0A096LNI7 61 aa3.69□□□□□ -1.82
SCARNA6.1-201ENST00000516989 TRBV30A0A0K0K1B3 111 aa3.69□□□□□ -1.82
SCARNA6.1-201ENST00000516989 TMEM223A0PJW6 202 aa3.69□□□□□ -1.82
SCARNA6.1-201ENST00000516989 C3orf79P0CE67 100 aa3.69□□□□□ -1.82
SCARNA6.1-201ENST00000516989 PLNP26678 52 aa3.69□□□□□ -1.82
SCARNA6.1-201ENST00000516989 C9orf116Q5BN46 136 aaPredicted RBP3.69□□□□□ -1.82
SCARNA6.1-201ENST00000516989 LCE1DQ5T752 114 aa3.69□□□□□ -1.82
SCARNA6.1-201ENST00000516989 SCXQ7RTU7 201 aa3.69□□□□□ -1.82
SCARNA6.1-201ENST00000516989 CIRBP-AS1Q8TBR5 109 aa3.69□□□□□ -1.82
SCARNA6.1-201ENST00000516989 IGKV2D-30A0A075B6S6 120 aa3.68□□□□□ -1.82
SCARNA6.1-201ENST00000516989 A0A087WYN8 130 aa3.68□□□□□ -1.82
SCARNA6.1-201ENST00000516989 C20orf202A1L168 122 aa3.68□□□□□ -1.82
SCARNA6.1-201ENST00000516989 PANO1I0J062 215 aa3.68□□□□□ -1.82
SCARNA6.1-201ENST00000516989 HERVK_113P61574 105 aa3.68□□□□□ -1.82
SCARNA6.1-201ENST00000516989 Q6ZSA8 131 aa3.68□□□□□ -1.82
SCARNA6.1-201ENST00000516989 HIST3H2BBQ8N257 126 aa3.68□□□□□ -1.82
SCARNA6.1-201ENST00000516989 Q8N9P0 234 aaPredicted RBP3.68□□□□□ -1.82
SCARNA6.1-201ENST00000516989 ZNF625Q96I27 306 aaPredicted RBP3.68□□□□□ -1.82
SCARNA6.1-201ENST00000516989 LINC00474Q9P2X8 69 aa3.68□□□□□ -1.82
SCARNA6.1-201ENST00000516989 HECTD4Q9Y4D8 3996 aa3.68□□□□□ -1.82
SCARNA6.1-201ENST00000516989 LEPROTO15243 131 aa3.67□□□□□ -1.82
SCARNA6.1-201ENST00000516989 TLX1NBP0CAT3 122 aa3.67□□□□□ -1.82
SCARNA6.1-201ENST00000516989 PFN2P35080 140 aa3.67□□□□□ -1.82
SCARNA6.1-201ENST00000516989 LINC01545Q5VT33 79 aa3.67□□□□□ -1.82
SCARNA6.1-201ENST00000516989 Q6ZRP5 223 aa3.67□□□□□ -1.82
SCARNA6.1-201ENST00000516989 SPACA4Q8TDM5 124 aa3.67□□□□□ -1.82
SCARNA6.1-201ENST00000516989 PLEKHB2Q96CS7 222 aa3.67□□□□□ -1.82
SCARNA6.1-201ENST00000516989 HIST1H2BLQ99880 126 aa3.67□□□□□ -1.82
SCARNA6.1-201ENST00000516989 A0A1W2PNN7 141 aa3.66□□□□□ -1.82
SCARNA6.1-201ENST00000516989 NDUFC2-KCTD14E9PQ53 114 aa3.66□□□□□ -1.82
SCARNA6.1-201ENST00000516989 LGALS3P17931 250 aaKnown RBP3.66□□□□□ -1.82
SCARNA6.1-201ENST00000516989 CIRBPQ14011 172 aaKnown RBP3.66□□□□□ -1.82
SCARNA6.1-201ENST00000516989 MEIG1Q5JSS6 88 aa3.66□□□□□ -1.82
SCARNA6.1-201ENST00000516989 XAGE1AQ9HD64 81 aa3.66□□□□□ -1.82
SCARNA6.1-201ENST00000516989 PKHD1P08F94 4074 aa3.65□□□□□ -1.82
SCARNA6.1-201ENST00000516989 DNAH8Q96JB1 4490 aa3.65□□□□□ -1.82
SCARNA6.1-201ENST00000516989 MYMXA0A1B0GTQ4 84 aa3.65□□□□□ -1.83
SCARNA6.1-201ENST00000516989 EPM2AB3EWF7 344 aa3.65□□□□□ -1.83
SCARNA6.1-201ENST00000516989 J3QQQ9 107 aa3.65□□□□□ -1.83
SCARNA6.1-201ENST00000516989 LINC00158P58513 81 aa3.65□□□□□ -1.83
SCARNA6.1-201ENST00000516989 SFTA2Q6UW10 78 aa3.65□□□□□ -1.83
SCARNA6.1-201ENST00000516989 ATOH7Q8N100 152 aa3.65□□□□□ -1.83
SCARNA6.1-201ENST00000516989 PLAC8Q9NZF1 115 aa3.65□□□□□ -1.83
SCARNA6.1-201ENST00000516989 NDUFA12Q9UI09 145 aa3.65□□□□□ -1.83
SCARNA6.1-201ENST00000516989 ERG28Q9UKR5 140 aa3.65□□□□□ -1.83
SCARNA6.1-201ENST00000516989 KRTAP4-8A0A0G2JLE6 195 aa3.64□□□□□ -1.83
SCARNA6.1-201ENST00000516989 FAM168BA1KXE4 195 aa3.64□□□□□ -1.83
SCARNA6.1-201ENST00000516989 LINC00587B1AMM8 73 aa3.64□□□□□ -1.83
SCARNA6.1-201ENST00000516989 E9PLD3 99 aa3.64□□□□□ -1.83
SCARNA6.1-201ENST00000516989 AKR1D1P51857 326 aa3.64□□□□□ -1.83
SCARNA6.1-201ENST00000516989 COX17Q14061 63 aa3.64□□□□□ -1.83
SCARNA6.1-201ENST00000516989 C9orf129Q5T035 196 aaKnown RBP3.64□□□□□ -1.83
SCARNA6.1-201ENST00000516989 FAM19A5Q7Z5A7 132 aaPredicted RBP3.64□□□□□ -1.83
SCARNA6.1-201ENST00000516989 C7orf33Q8WU49 177 aa3.64□□□□□ -1.83
SCARNA6.1-201ENST00000516989 HSBP1L1C9JCN9 74 aa3.63□□□□□ -1.83
SCARNA6.1-201ENST00000516989 SMIM13P0DJ93 91 aa3.63□□□□□ -1.83
SCARNA6.1-201ENST00000516989 NMUP48645 174 aa3.63□□□□□ -1.83
SCARNA6.1-201ENST00000516989 TSPEAR-AS2P59090 65 aa3.63□□□□□ -1.83
SCARNA6.1-201ENST00000516989 Q5VSD8 79 aa3.63□□□□□ -1.83
SCARNA6.1-201ENST00000516989 PHF5AQ7RTV0 110 aaKnown RBP3.63□□□□□ -1.83
SCARNA6.1-201ENST00000516989 APOBP04114 4563 aaKnown RBP3.63□□□□□ -1.83
SCARNA6.1-201ENST00000516989 IGKV2D-26A0A0A0MRZ7 120 aa3.62□□□□□ -1.83
SCARNA6.1-201ENST00000516989 RPL37AP61513 92 aaKnown RBP3.62□□□□□ -1.83
SCARNA6.1-201ENST00000516989 ADAMTSL4-AS1Q5T5F5 129 aa3.62□□□□□ -1.83
SCARNA6.1-201ENST00000516989 MIR7-3HGQ8N6C7 128 aa3.62□□□□□ -1.83
SCARNA6.1-201ENST00000516989 SND1-IT1Q9HBX3 110 aa3.62□□□□□ -1.83
SCARNA6.1-201ENST00000516989 C22orf24Q9Y442 160 aa3.62□□□□□ -1.83
SCARNA6.1-201ENST00000516989 A0A0J9YXY3 114 aa3.61□□□□□ -1.83
SCARNA6.1-201ENST00000516989 ZNF815PA8K554 130 aa3.61□□□□□ -1.83
SCARNA6.1-201ENST00000516989 M0QXV9 152 aa3.61□□□□□ -1.83
SCARNA6.1-201ENST00000516989 UBE2BP63146 152 aa3.61□□□□□ -1.83
SCARNA6.1-201ENST00000516989 KRTAP7-1Q8IUC3 87 aa3.61□□□□□ -1.83
SCARNA6.1-201ENST00000516989 DAND5Q8N907 189 aa3.61□□□□□ -1.83
SCARNA6.1-201ENST00000516989 NKAPP1Q8N9T2 125 aa3.61□□□□□ -1.83
SCARNA6.1-201ENST00000516989 KRTAP4-5Q9BYR2 181 aa3.61□□□□□ -1.83
SCARNA6.1-201ENST00000516989 TTTY13Q9BZ97 58 aa3.61□□□□□ -1.83
SCARNA6.1-201ENST00000516989 INAFM2P0DMQ5 153 aa3.6□□□□□ -1.83
SCARNA6.1-201ENST00000516989 SCGB1D4Q6XE38 83 aa3.6□□□□□ -1.83
SCARNA6.1-201ENST00000516989 PCP2Q8IVA1 136 aa3.6□□□□□ -1.83
SCARNA6.1-201ENST00000516989 BOD1L2Q8IYS8 172 aa3.6□□□□□ -1.83
SCARNA6.1-201ENST00000516989 HSPG2P98160 4391 aa3.59□□□□□ -1.83
SCARNA6.1-201ENST00000516989 RPL37AP8A6NKH3 93 aa3.59□□□□□ -1.83
SCARNA6.1-201ENST00000516989 NPC2P61916 151 aa3.59□□□□□ -1.83
SCARNA6.1-201ENST00000516989 PRR3P79522 188 aaKnown RBP3.59□□□□□ -1.83
SCARNA6.1-201ENST00000516989 JOSD1Q15040 202 aaPredicted RBP3.59□□□□□ -1.83
SCARNA6.1-201ENST00000516989 C1orf137Q5JT78 98 aa3.59□□□□□ -1.83
SCARNA6.1-201ENST00000516989 MRPL55Q7Z7F7 128 aaKnown RBP3.59□□□□□ -1.83
SCARNA6.1-201ENST00000516989 LINC00167Q96N53 147 aa3.59□□□□□ -1.83
SCARNA6.1-201ENST00000516989 MIEN1Q9BRT3 115 aa3.59□□□□□ -1.83
SCARNA6.1-201ENST00000516989 FAT1Q14517 4588 aa3.59□□□□□ -1.83
SCARNA6.1-201ENST00000516989 A0A087X002 238 aa3.58□□□□□ -1.84
SCARNA6.1-201ENST00000516989 NOTCH2NLQ7Z3S9 236 aa3.58□□□□□ -1.84
SCARNA6.1-201ENST00000516989 TP73-AS1Q9UF72 201 aa3.58□□□□□ -1.84
SCARNA6.1-201ENST00000516989 PSORS1C2Q9UIG4 136 aa3.58□□□□□ -1.84
SCARNA6.1-201ENST00000516989 M0R378 163 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms