RNA–Protein interactions for RNA: ENST00000515298.5

PAPD4-216, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 2

Gene PAPD4, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-216ENST00000515298 MUC17Q685J3 4493 aa-0.52□□□□□ -2.49
PAPD4-216ENST00000515298 RGPD3A6NKT7 1758 aaPredicted RBP-0.52□□□□□ -2.49
PAPD4-216ENST00000515298 RGPD4Q7Z3J3 1758 aa-0.52□□□□□ -2.49
PAPD4-216ENST00000515298 QSER1Q2KHR3 1735 aa-0.52□□□□□ -2.49
PAPD4-216ENST00000515298 LAMA1P25391 3075 aa-0.53□□□□□ -2.49
PAPD4-216ENST00000515298 A2ML1A8K2U0 1454 aa-0.53□□□□□ -2.49
PAPD4-216ENST00000515298 MRC2Q9UBG0 1479 aa-0.53□□□□□ -2.49
PAPD4-216ENST00000515298 NCOA3Q9Y6Q9 1424 aa-0.53□□□□□ -2.49
PAPD4-216ENST00000515298 MYH4Q9Y623 1939 aa-0.53□□□□□ -2.49
PAPD4-216ENST00000515298 FAM24AA6NFZ4 105 aa-0.53□□□□□ -2.49
PAPD4-216ENST00000515298 CRYM-AS1A6NIL9 109 aa-0.53□□□□□ -2.49
PAPD4-216ENST00000515298 K7EP13 123 aa-0.53□□□□□ -2.49
PAPD4-216ENST00000515298 AKAIN1P0CW23 69 aa-0.53□□□□□ -2.49
PAPD4-216ENST00000515298 FGF7P21781 194 aa-0.53□□□□□ -2.49
PAPD4-216ENST00000515298 ASIPP42127 132 aa-0.53□□□□□ -2.49
PAPD4-216ENST00000515298 ATP5EP56381 51 aaPredicted RBP-0.53□□□□□ -2.49
PAPD4-216ENST00000515298 LINC00846Q9NV44 126 aa-0.53□□□□□ -2.49
PAPD4-216ENST00000515298 CDKN2A-AS1Q9UH64 79 aa-0.53□□□□□ -2.49
PAPD4-216ENST00000515298 CCDC168Q8NDH2 2452 aa-0.53□□□□□ -2.49
PAPD4-216ENST00000515298 SCN11AQ9UI33 1791 aa-0.53□□□□□ -2.49
PAPD4-216ENST00000515298 SPHKAPQ2M3C7 1700 aa-0.53□□□□□ -2.49
PAPD4-216ENST00000515298 CRYBG1Q9Y4K1 1723 aa-0.53□□□□□ -2.49
PAPD4-216ENST00000515298 AKAP9Q99996 3911 aa-0.53□□□□□ -2.49
PAPD4-216ENST00000515298 DMXL1Q9Y485 3027 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 PKD1L2Q7Z442 2459 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 MYOM2P54296 1465 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 A0A0G2JND7 137 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 SPTY2D1-AS1A0A0U1RR47 76 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 C7orf77A4D0Y5 90 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 NAP1L6A6NFF2 107 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 H3BQF6 201 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 CCL22O00626 93 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 NDUFA2O43678 99 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 SNAPC5O75971 98 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 GNGT1P63211 74 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 CCDC58Q4VC31 144 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 PP6455Q8WZ26 134 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 HIGD1BQ9P298 99 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 VPS13BQ7Z7G8 4022 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 VPS13DQ5THJ4 4388 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 FAM186AA6NE01 2351 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 NRKQ7Z2Y5 1582 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 TRANK1O15050 2925 aa-0.54□□□□□ -2.5
PAPD4-216ENST00000515298 DNAH9Q9NYC9 4486 aa-0.55□□□□□ -2.5
PAPD4-216ENST00000515298 PREX1Q8TCU6 1659 aa-0.55□□□□□ -2.5
PAPD4-216ENST00000515298 TRBV7-7A0A0K0K1E9 115 aa-0.55□□□□□ -2.5
PAPD4-216ENST00000515298 H0Y9P7 68 aa-0.55□□□□□ -2.5
PAPD4-216ENST00000515298 VAMP8Q9BV40 100 aa-0.55□□□□□ -2.5
PAPD4-216ENST00000515298 FAM107BQ9H098 131 aa-0.55□□□□□ -2.5
PAPD4-216ENST00000515298 NEBP20929 6669 aa-0.55□□□□□ -2.5
PAPD4-216ENST00000515298 MTORP42345 2549 aa-0.55□□□□□ -2.5
PAPD4-216ENST00000515298 LRRK2Q5S007 2527 aa-0.55□□□□□ -2.5
PAPD4-216ENST00000515298 ARHGAP5Q13017 1502 aa-0.55□□□□□ -2.5
PAPD4-216ENST00000515298 ANKRD11Q6UB99 2663 aaPredicted RBP-0.55□□□□□ -2.5
PAPD4-216ENST00000515298 TIAM2Q8IVF5 1701 aa-0.55□□□□□ -2.5
PAPD4-216ENST00000515298 CLIP1P30622 1438 aa-0.55□□□□□ -2.5
PAPD4-216ENST00000515298 ANKRD50Q9ULJ7 1429 aa-0.55□□□□□ -2.5
PAPD4-216ENST00000515298 A0A0C4DFX4 3053 aa-0.56□□□□□ -2.5
PAPD4-216ENST00000515298 ALKQ9UM73 1620 aa-0.56□□□□□ -2.5
PAPD4-216ENST00000515298 GCN1Q92616 2671 aaKnown RBP-0.56□□□□□ -2.5
PAPD4-216ENST00000515298 EPPK1P58107 5090 aaKnown RBP-0.56□□□□□ -2.5
PAPD4-216ENST00000515298 NIPBLQ6KC79 2804 aaeCLIP-0.56□□□□□ -2.5
PAPD4-216ENST00000515298 TMEM262E9PQX1 116 aa-0.56□□□□□ -2.5
PAPD4-216ENST00000515298 ARMS2P0C7Q2 107 aa-0.56□□□□□ -2.5
PAPD4-216ENST00000515298 SVBPQ8N300 66 aa-0.56□□□□□ -2.5
PAPD4-216ENST00000515298 TSC22D3Q99576 134 aa-0.56□□□□□ -2.5
PAPD4-216ENST00000515298 MGAM2Q2M2H8 2515 aa-0.56□□□□□ -2.5
PAPD4-216ENST00000515298 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.56□□□□□ -2.5
PAPD4-216ENST00000515298 ROCK2O75116 1388 aaKnown RBP-0.57□□□□□ -2.5
PAPD4-216ENST00000515298 SAMD9Q5K651 1589 aa-0.57□□□□□ -2.5
PAPD4-216ENST00000515298 MAPKBP1O60336 1514 aa-0.57□□□□□ -2.5
PAPD4-216ENST00000515298 SUPT6HQ7KZ85 1726 aaKnown RBP-0.57□□□□□ -2.5
PAPD4-216ENST00000515298 hADV29S1A0JD25 119 aa-0.57□□□□□ -2.5
PAPD4-216ENST00000515298 PSMG4Q5JS54 123 aa-0.57□□□□□ -2.5
PAPD4-216ENST00000515298 CGREF1Q99674 301 aa-0.57□□□□□ -2.5
PAPD4-216ENST00000515298 RGPD8O14715 1765 aaPredicted RBP-0.57□□□□□ -2.5
PAPD4-216ENST00000515298 RGPD5Q99666 1765 aa-0.57□□□□□ -2.5
PAPD4-216ENST00000515298 RGPD1P0DJD0 1748 aa-0.58□□□□□ -2.5
PAPD4-216ENST00000515298 KALRNO60229 2985 aa-0.58□□□□□ -2.5
PAPD4-216ENST00000515298 LAMA3Q16787 3333 aa-0.58□□□□□ -2.5
PAPD4-216ENST00000515298 LAMA2P24043 3122 aaKnown RBP-0.58□□□□□ -2.5
PAPD4-216ENST00000515298 HYDINQ4G0P3 5121 aa-0.58□□□□□ -2.5
PAPD4-216ENST00000515298 C9orf92A6NGG3 77 aa-0.58□□□□□ -2.5
PAPD4-216ENST00000515298 KRTDAPP60985 99 aa-0.58□□□□□ -2.5
PAPD4-216ENST00000515298 PPP3R1P63098 170 aa-0.58□□□□□ -2.5
PAPD4-216ENST00000515298 PMCHL1Q16048 86 aa-0.58□□□□□ -2.5
PAPD4-216ENST00000515298 C1orf54Q8WWF1 131 aa-0.58□□□□□ -2.5
PAPD4-216ENST00000515298 PSENENQ9NZ42 101 aa-0.58□□□□□ -2.5
PAPD4-216ENST00000515298 CACFD1Q9UGQ2 172 aa-0.58□□□□□ -2.5
PAPD4-216ENST00000515298 ANK3Q12955 4377 aaKnown RBP-0.58□□□□□ -2.5
PAPD4-216ENST00000515298 FAM135AQ9P2D6 1515 aa-0.59□□□□□ -2.5
PAPD4-216ENST00000515298 ACACBO00763 2458 aa-0.59□□□□□ -2.5
PAPD4-216ENST00000515298 RIF1Q5UIP0 2472 aaKnown RBP-0.59□□□□□ -2.5
PAPD4-216ENST00000515298 PZPP20742 1482 aa-0.59□□□□□ -2.5
PAPD4-216ENST00000515298 MLH3Q9UHC1 1453 aa-0.59□□□□□ -2.5
PAPD4-216ENST00000515298 TRBV25-1A0A075B6N4 114 aa-0.59□□□□□ -2.5
PAPD4-216ENST00000515298 TMEM218A2RU14 115 aa-0.59□□□□□ -2.5
PAPD4-216ENST00000515298 NDUFA3O95167 84 aa-0.59□□□□□ -2.5
PAPD4-216ENST00000515298 UQCRHP07919 91 aa-0.59□□□□□ -2.5
PAPD4-216ENST00000515298 S100A1P23297 94 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms