RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 MOBPQ13875 183 aa5.71□□□□□ -1.5
CLDND1-227ENST00000513452 ADIRFQ15847 76 aa5.71□□□□□ -1.5
CLDND1-227ENST00000513452 Q8NDZ9 215 aa5.71□□□□□ -1.5
CLDND1-227ENST00000513452 MAP1LC3AQ9H492 121 aa5.71□□□□□ -1.5
CLDND1-227ENST00000513452 SND1-IT1Q9HBX3 110 aa5.71□□□□□ -1.5
CLDND1-227ENST00000513452 ATP5LO75964 103 aa5.7□□□□□ -1.5
CLDND1-227ENST00000513452 SPINK8P0C7L1 97 aa5.7□□□□□ -1.5
CLDND1-227ENST00000513452 RAB14P61106 215 aa5.7□□□□□ -1.5
CLDND1-227ENST00000513452 RPL23P62829 140 aaKnown RBP5.7□□□□□ -1.5
CLDND1-227ENST00000513452 RPL24P83731 157 aaKnown RBP5.7□□□□□ -1.5
CLDND1-227ENST00000513452 PAPPA-AS1Q5QFB9 102 aa5.7□□□□□ -1.5
CLDND1-227ENST00000513452 COX6B2Q6YFQ2 88 aa5.7□□□□□ -1.5
CLDND1-227ENST00000513452 AKAP14Q86UN6 197 aa5.7□□□□□ -1.5
CLDND1-227ENST00000513452 IGLV9-49A0A0B4J1Y8 123 aa5.69□□□□□ -1.5
CLDND1-227ENST00000513452 SRP19P09132 144 aaKnown RBP5.69□□□□□ -1.5
CLDND1-227ENST00000513452 BLOC1S1P78537 153 aa5.69□□□□□ -1.5
CLDND1-227ENST00000513452 ORMDL2Q53FV1 153 aa5.69□□□□□ -1.5
CLDND1-227ENST00000513452 Q8N8P6 123 aa5.69□□□□□ -1.5
CLDND1-227ENST00000513452 IGLV5-45A0A087WSX0 123 aa5.67□□□□□ -1.5
CLDND1-227ENST00000513452 TINCRA0A1B0GVN0 87 aa5.67□□□□□ -1.5
CLDND1-227ENST00000513452 GHRHP01286 108 aa5.67□□□□□ -1.5
CLDND1-227ENST00000513452 LINC00483Q53H64 154 aa5.67□□□□□ -1.5
CLDND1-227ENST00000513452 ALKAL2Q6UX46 152 aa5.67□□□□□ -1.5
CLDND1-227ENST00000513452 LAMTOR2Q9Y2Q5 125 aa5.67□□□□□ -1.5
CLDND1-227ENST00000513452 C9orf92A6NGG3 77 aa5.66□□□□□ -1.5
CLDND1-227ENST00000513452 GAGE2AQ6NT46 116 aa5.66□□□□□ -1.5
CLDND1-227ENST00000513452 SMCR5Q8TEV8 140 aa5.66□□□□□ -1.5
CLDND1-227ENST00000513452 TIMM17AQ99595 171 aa5.66□□□□□ -1.5
CLDND1-227ENST00000513452 ERG28Q9UKR5 140 aa5.66□□□□□ -1.5
CLDND1-227ENST00000513452 SSBP3-AS1Q7Z2R9 100 aa5.65□□□□□ -1.5
CLDND1-227ENST00000513452 K7EMI3 77 aa5.64□□□□□ -1.51
CLDND1-227ENST00000513452 ATP5L2Q7Z4Y8 100 aa5.64□□□□□ -1.51
CLDND1-227ENST00000513452 TOMM6Q96B49 74 aa5.64□□□□□ -1.51
CLDND1-227ENST00000513452 NAT8Q9UHE5 227 aa5.64□□□□□ -1.51
CLDND1-227ENST00000513452 PRYO14603 147 aa5.63□□□□□ -1.51
CLDND1-227ENST00000513452 ZNF625Q96I27 306 aaPredicted RBP5.63□□□□□ -1.51
CLDND1-227ENST00000513452 NXT2Q9NPJ8 142 aaKnown RBP5.63□□□□□ -1.51
CLDND1-227ENST00000513452 FLGP20930 4061 aaPredicted RBP5.63□□□□□ -1.51
CLDND1-227ENST00000513452 ETDCA0A1B0GVM5 59 aa5.62□□□□□ -1.51
CLDND1-227ENST00000513452 KRTAP4-16G5E9R7 235 aaPredicted RBP5.62□□□□□ -1.51
CLDND1-227ENST00000513452 ADCYAP1P18509 176 aa5.62□□□□□ -1.51
CLDND1-227ENST00000513452 COX17Q14061 63 aa5.62□□□□□ -1.51
CLDND1-227ENST00000513452 ERASQ7Z444 233 aa5.62□□□□□ -1.51
CLDND1-227ENST00000513452 SCGB3A1Q96QR1 104 aa5.62□□□□□ -1.51
CLDND1-227ENST00000513452 SSPOA2VEC9 5147 aa5.62□□□□□ -1.51
CLDND1-227ENST00000513452 H3BRM9 83 aa5.61□□□□□ -1.51
CLDND1-227ENST00000513452 G0S2P27469 103 aa5.61□□□□□ -1.51
CLDND1-227ENST00000513452 C9orf153Q5TBE3 101 aa5.61□□□□□ -1.51
CLDND1-227ENST00000513452 CST9LQ9H4G1 147 aa5.61□□□□□ -1.51
CLDND1-227ENST00000513452 SPRR1AP35321 89 aa5.6□□□□□ -1.51
CLDND1-227ENST00000513452 TCTE3Q8IZS6 198 aa5.6□□□□□ -1.51
CLDND1-227ENST00000513452 IGLV5-39A0A0G2JS06 123 aa5.59□□□□□ -1.51
CLDND1-227ENST00000513452 C9JQL5 133 aa5.59□□□□□ -1.51
CLDND1-227ENST00000513452 NCR3O14931 201 aa5.59□□□□□ -1.51
CLDND1-227ENST00000513452 ERC2-IT1O76042 136 aa5.59□□□□□ -1.51
CLDND1-227ENST00000513452 IGLV6-57P01721 117 aa5.58□□□□□ -1.52
CLDND1-227ENST00000513452 CFC1P0CG37 223 aa5.58□□□□□ -1.52
CLDND1-227ENST00000513452 KCNQ1DNQ9H478 68 aa5.58□□□□□ -1.52
CLDND1-227ENST00000513452 USH2AO75445 5202 aa5.57□□□□□ -1.52
CLDND1-227ENST00000513452 PMVKQ15126 192 aa5.57□□□□□ -1.52
CLDND1-227ENST00000513452 ANKRD39Q53RE8 183 aa5.57□□□□□ -1.52
CLDND1-227ENST00000513452 FCGBPQ9Y6R7 5405 aaPredicted RBP5.57□□□□□ -1.52
CLDND1-227ENST00000513452 A0A0U1RRA0 63 aa5.56□□□□□ -1.52
CLDND1-227ENST00000513452 LINC00158P58513 81 aa5.56□□□□□ -1.52
CLDND1-227ENST00000513452 LIMD2Q9BT23 127 aa5.56□□□□□ -1.52
CLDND1-227ENST00000513452 TRBV10-3A0A0K0K1G6 114 aa5.55□□□□□ -1.52
CLDND1-227ENST00000513452 B5MCH6 92 aa5.55□□□□□ -1.52
CLDND1-227ENST00000513452 BOD1L2Q8IYS8 172 aa5.55□□□□□ -1.52
CLDND1-227ENST00000513452 IGLC3P0DOY3 106 aa5.54□□□□□ -1.52
CLDND1-227ENST00000513452 ZNF22P17026 224 aaPredicted RBP5.54□□□□□ -1.52
CLDND1-227ENST00000513452 Q6Q795 121 aa5.54□□□□□ -1.52
CLDND1-227ENST00000513452 HRCT1Q6UXD1 115 aa5.54□□□□□ -1.52
CLDND1-227ENST00000513452 Q9BRP9 147 aa5.54□□□□□ -1.52
CLDND1-227ENST00000513452 TRAV9-1A0A075B6T8 112 aa5.53□□□□□ -1.52
CLDND1-227ENST00000513452 RPL37P61927 97 aaKnown RBP5.53□□□□□ -1.52
CLDND1-227ENST00000513452 LCE1DQ5T752 114 aa5.53□□□□□ -1.52
CLDND1-227ENST00000513452 SFTA2Q6UW10 78 aa5.53□□□□□ -1.52
CLDND1-227ENST00000513452 SLC7A5P1Q8MH63 180 aa5.53□□□□□ -1.52
CLDND1-227ENST00000513452 KRTAP9-8Q9BYQ0 159 aa5.53□□□□□ -1.52
CLDND1-227ENST00000513452 LINC01549A6NIU2 74 aa5.52□□□□□ -1.53
CLDND1-227ENST00000513452 NDUFA6P56556 154 aa5.51□□□□□ -1.53
CLDND1-227ENST00000513452 S100A12P80511 92 aa5.51□□□□□ -1.53
CLDND1-227ENST00000513452 IFITM2Q01629 132 aa5.51□□□□□ -1.53
CLDND1-227ENST00000513452 PEA15Q15121 130 aa5.51□□□□□ -1.53
CLDND1-227ENST00000513452 KIAA1644Q3SXP7 199 aa5.51□□□□□ -1.53
CLDND1-227ENST00000513452 Q6ZRX8 168 aa5.51□□□□□ -1.53
CLDND1-227ENST00000513452 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
CLDND1-227ENST00000513452 SMIM13P0DJ93 91 aa5.49□□□□□ -1.53
CLDND1-227ENST00000513452 LINC01546A6NGU7 62 aa5.48□□□□□ -1.53
CLDND1-227ENST00000513452 C11orf86A6NJI1 115 aa5.48□□□□□ -1.53
CLDND1-227ENST00000513452 TMEM170BQ5T4T1 132 aa5.48□□□□□ -1.53
CLDND1-227ENST00000513452 MIR7-3HGQ8N6C7 128 aa5.48□□□□□ -1.53
CLDND1-227ENST00000513452 ST20-AS1Q8NBB2 130 aa5.48□□□□□ -1.53
CLDND1-227ENST00000513452 MACF1Q9UPN3 7388 aaKnown RBP5.48□□□□□ -1.53
CLDND1-227ENST00000513452 EIF4EBP3O60516 100 aaPredicted RBP5.47□□□□□ -1.53
CLDND1-227ENST00000513452 DDTP30046 118 aa5.47□□□□□ -1.53
CLDND1-227ENST00000513452 MEIG1Q5JSS6 88 aa5.47□□□□□ -1.53
CLDND1-227ENST00000513452 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
CLDND1-227ENST00000513452 H7C2G1 150 aa5.45□□□□□ -1.54
CLDND1-227ENST00000513452 MT-ND4LP03901 98 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms