RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 CNFNQ9BYD5 112 aa2.23□□□□□ -2.05
HTT-210ENST00000512909 RYR2Q92736 4967 aa2.23□□□□□ -2.05
HTT-210ENST00000512909 LYSTQ99698 3801 aa2.23□□□□□ -2.05
HTT-210ENST00000512909 ALMS1Q8TCU4 4167 aa2.23□□□□□ -2.05
HTT-210ENST00000512909 IGHV1-58A0A0C4DH39 117 aa2.22□□□□□ -2.05
HTT-210ENST00000512909 TRBV27A0A0K0K1C4 114 aa2.22□□□□□ -2.05
HTT-210ENST00000512909 COX7A2LO14548 114 aa2.22□□□□□ -2.05
HTT-210ENST00000512909 NDUFS6O75380 124 aaKnown RBP2.22□□□□□ -2.05
HTT-210ENST00000512909 APOMO95445 188 aa2.22□□□□□ -2.05
HTT-210ENST00000512909 NPYP01303 97 aa2.22□□□□□ -2.05
HTT-210ENST00000512909 PPBPP02775 128 aa2.22□□□□□ -2.05
HTT-210ENST00000512909 ESDP10768 282 aa2.22□□□□□ -2.05
HTT-210ENST00000512909 NDUFA6P56556 154 aa2.22□□□□□ -2.05
HTT-210ENST00000512909 RPL39P62891 51 aaKnown RBP2.22□□□□□ -2.05
HTT-210ENST00000512909 SDIM1Q6ZPB5 146 aa2.22□□□□□ -2.05
HTT-210ENST00000512909 C20orf78Q9BR46 151 aa2.22□□□□□ -2.05
HTT-210ENST00000512909 MAP1LC3AQ9H492 121 aa2.22□□□□□ -2.05
HTT-210ENST00000512909 CDC42SE2Q9NRR3 84 aa2.22□□□□□ -2.05
HTT-210ENST00000512909 TOMM7Q9P0U1 55 aa2.22□□□□□ -2.05
HTT-210ENST00000512909 TGIF2-C20orf24A0A0A6YYL0 155 aa2.21□□□□□ -2.06
HTT-210ENST00000512909 LOC107984640A0A0U1RRK4 108 aa2.21□□□□□ -2.06
HTT-210ENST00000512909 IFI27P40305 119 aaPredicted RBP2.21□□□□□ -2.06
HTT-210ENST00000512909 FABP9Q0Z7S8 132 aa2.21□□□□□ -2.06
HTT-210ENST00000512909 CLLU1Q5K131 121 aa2.21□□□□□ -2.06
HTT-210ENST00000512909 KRTAP26-1Q6PEX3 210 aa2.21□□□□□ -2.06
HTT-210ENST00000512909 Q6ZUT4 128 aa2.21□□□□□ -2.06
HTT-210ENST00000512909 COMMD7Q86VX2 200 aa2.21□□□□□ -2.06
HTT-210ENST00000512909 CARD19Q96LW7 228 aa2.21□□□□□ -2.06
HTT-210ENST00000512909 SMIM2Q9BVW6 85 aa2.21□□□□□ -2.06
HTT-210ENST00000512909 MAP1LC3CQ9BXW4 147 aa2.21□□□□□ -2.06
HTT-210ENST00000512909 UBE2D4Q9Y2X8 147 aa2.21□□□□□ -2.06
HTT-210ENST00000512909 TRBV24-1A0A075B6N3 115 aa2.2□□□□□ -2.06
HTT-210ENST00000512909 TMEM218A2RU14 115 aa2.2□□□□□ -2.06
HTT-210ENST00000512909 G0S2P27469 103 aa2.2□□□□□ -2.06
HTT-210ENST00000512909 SPAG11BQ08648 103 aa2.2□□□□□ -2.06
HTT-210ENST00000512909 UNQ6190/PRO20217Q6UXQ8 127 aa2.2□□□□□ -2.06
HTT-210ENST00000512909 Q6ZRU5 148 aa2.2□□□□□ -2.06
HTT-210ENST00000512909 ATP5L2Q7Z4Y8 100 aa2.2□□□□□ -2.06
HTT-210ENST00000512909 MRPL52Q86TS9 123 aaKnown RBP2.2□□□□□ -2.06
HTT-210ENST00000512909 Q8N8P6 123 aa2.2□□□□□ -2.06
HTT-210ENST00000512909 TMEM141Q96I45 108 aa2.2□□□□□ -2.06
HTT-210ENST00000512909 PACRGQ96M98 296 aaPredicted RBP2.2□□□□□ -2.06
HTT-210ENST00000512909 SCGB3A1Q96QR1 104 aa2.2□□□□□ -2.06
HTT-210ENST00000512909 IMMP2LQ96T52 175 aa2.2□□□□□ -2.06
HTT-210ENST00000512909 C2orf88Q9BSF0 95 aa2.2□□□□□ -2.06
HTT-210ENST00000512909 SMCO4Q9NRQ5 59 aa2.2□□□□□ -2.06
HTT-210ENST00000512909 SPANXA1Q9NS26 97 aa2.2□□□□□ -2.06
HTT-210ENST00000512909 LINC00474Q9P2X8 69 aa2.2□□□□□ -2.06
HTT-210ENST00000512909 CYSLTR1Q9Y271 337 aa2.2□□□□□ -2.06
HTT-210ENST00000512909 PKIGQ9Y2B9 76 aa2.2□□□□□ -2.06
HTT-210ENST00000512909 HYDINQ4G0P3 5121 aa2.2□□□□□ -2.06
HTT-210ENST00000512909 DYNC2H1Q8NCM8 4307 aaKnown RBP2.19□□□□□ -2.06
HTT-210ENST00000512909 A0A096LNI7 61 aa2.19□□□□□ -2.06
HTT-210ENST00000512909 A0A1B0GXF2 115 aa2.19□□□□□ -2.06
HTT-210ENST00000512909 NDUFA1O15239 70 aa2.19□□□□□ -2.06
HTT-210ENST00000512909 APOC3P02656 99 aa2.19□□□□□ -2.06
HTT-210ENST00000512909 MT-ND6P03923 174 aa2.19□□□□□ -2.06
HTT-210ENST00000512909 KRTAP10-10P60014 251 aa2.19□□□□□ -2.06
HTT-210ENST00000512909 RAB5BP61020 215 aa2.19□□□□□ -2.06
HTT-210ENST00000512909 CKS1BP61024 79 aa2.19□□□□□ -2.06
HTT-210ENST00000512909 CNBPP62633 177 aaKnown RBP2.19□□□□□ -2.06
HTT-210ENST00000512909 IFITM2Q01629 132 aa2.19□□□□□ -2.06
HTT-210ENST00000512909 RHEBQ15382 184 aa2.19□□□□□ -2.06
HTT-210ENST00000512909 NDUFA5Q16718 116 aa2.19□□□□□ -2.06
HTT-210ENST00000512909 Q6ZSA8 131 aa2.19□□□□□ -2.06
HTT-210ENST00000512909 TIMM21Q9BVV7 248 aa2.19□□□□□ -2.06
HTT-210ENST00000512909 NXT2Q9NPJ8 142 aaKnown RBP2.19□□□□□ -2.06
HTT-210ENST00000512909 BIRC6Q9NR09 4857 aa2.18□□□□□ -2.06
HTT-210ENST00000512909 GVQW2A0A096LPI5 108 aaPredicted RBP2.18□□□□□ -2.06
HTT-210ENST00000512909 UBE2BP63146 152 aa2.18□□□□□ -2.06
HTT-210ENST00000512909 FAM19A5Q7Z5A7 132 aaPredicted RBP2.18□□□□□ -2.06
HTT-210ENST00000512909 SEC11CQ9BY50 192 aa2.18□□□□□ -2.06
HTT-210ENST00000512909 SND1-IT1Q9HBX3 110 aa2.18□□□□□ -2.06
HTT-210ENST00000512909 LAMTOR2Q9Y2Q5 125 aa2.18□□□□□ -2.06
HTT-210ENST00000512909 EPPK1P58107 5090 aaKnown RBP2.18□□□□□ -2.06
HTT-210ENST00000512909 A0A1W2PNN7 141 aa2.17□□□□□ -2.06
HTT-210ENST00000512909 SEC11AP67812 179 aa2.17□□□□□ -2.06
HTT-210ENST00000512909 MRPS36P82909 103 aaKnown RBP2.17□□□□□ -2.06
HTT-210ENST00000512909 C9orf116Q5BN46 136 aaPredicted RBP2.17□□□□□ -2.06
HTT-210ENST00000512909 C1orf137Q5JT78 98 aa2.17□□□□□ -2.06
HTT-210ENST00000512909 C2orf82Q6UX34 121 aa2.17□□□□□ -2.06
HTT-210ENST00000512909 PHF5AQ7RTV0 110 aaKnown RBP2.17□□□□□ -2.06
HTT-210ENST00000512909 OR10D4PQ8NGN7 298 aa2.17□□□□□ -2.06
HTT-210ENST00000512909 SPACA4Q8TDM5 124 aa2.17□□□□□ -2.06
HTT-210ENST00000512909 GNB1LQ9BYB4 327 aa2.17□□□□□ -2.06
HTT-210ENST00000512909 PLAC8Q9NZF1 115 aa2.17□□□□□ -2.06
HTT-210ENST00000512909 KMT2AQ03164 3969 aa2.17□□□□□ -2.06
HTT-210ENST00000512909 TRAV9-1A0A075B6T8 112 aa2.16□□□□□ -2.06
HTT-210ENST00000512909 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.16□□□□□ -2.06
HTT-210ENST00000512909 SPINK8P0C7L1 97 aa2.16□□□□□ -2.06
HTT-210ENST00000512909 LINC00614P0C842 121 aa2.16□□□□□ -2.06
HTT-210ENST00000512909 ADCYAP1P18509 176 aa2.16□□□□□ -2.06
HTT-210ENST00000512909 UBE2D1P51668 147 aa2.16□□□□□ -2.06
HTT-210ENST00000512909 HERVK_113P63121 156 aa2.16□□□□□ -2.06
HTT-210ENST00000512909 PMCHL1Q16048 86 aa2.16□□□□□ -2.06
HTT-210ENST00000512909 TMEM170BQ5T4T1 132 aa2.16□□□□□ -2.06
HTT-210ENST00000512909 ADM2Q7Z4H4 148 aa2.16□□□□□ -2.06
HTT-210ENST00000512909 SVBPQ8N300 66 aa2.16□□□□□ -2.06
HTT-210ENST00000512909 TOMM6Q96B49 74 aa2.16□□□□□ -2.06
HTT-210ENST00000512909 C6orf48Q9UBA6 75 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms