RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 A0A087WYN8 130 aa8.33□□□□□ -1.08
PRDM16-207ENST00000512462 TRACP01848 142 aa8.33□□□□□ -1.08
PRDM16-207ENST00000512462 V9GYY9 64 aa8.32□□□□□ -1.08
PRDM16-207ENST00000512462 FBN1P35555 2871 aaKnown RBP8.32□□□□□ -1.08
PRDM16-207ENST00000512462 UBL5Q9BZL1 73 aa8.32□□□□□ -1.08
PRDM16-207ENST00000512462 X6R8D5 127 aa8.32□□□□□ -1.08
PRDM16-207ENST00000512462 A0A087WZ39 114 aa8.31□□□□□ -1.08
PRDM16-207ENST00000512462 UBE2BP63146 152 aa8.31□□□□□ -1.08
PRDM16-207ENST00000512462 A0A096LNI7 61 aa8.31□□□□□ -1.08
PRDM16-207ENST00000512462 VWFP04275 2813 aa8.31□□□□□ -1.08
PRDM16-207ENST00000512462 WFDC9Q8NEX5 89 aa8.31□□□□□ -1.08
PRDM16-207ENST00000512462 IGHV3OR16-9A0A0B4J2B5 98 aa8.3□□□□□ -1.08
PRDM16-207ENST00000512462 KRTAP1-1Q07627 177 aa8.3□□□□□ -1.08
PRDM16-207ENST00000512462 FAM236DA0A1B0GTK5 79 aa8.3□□□□□ -1.08
PRDM16-207ENST00000512462 FAM236CP0DP71 79 aa8.3□□□□□ -1.08
PRDM16-207ENST00000512462 TENM1Q9UKZ4 2725 aa8.3□□□□□ -1.08
PRDM16-207ENST00000512462 Q6ZQY7 126 aa8.3□□□□□ -1.08
PRDM16-207ENST00000512462 RPL37AP8A6NKH3 93 aa8.29□□□□□ -1.08
PRDM16-207ENST00000512462 SBSPONQ8IVN8 264 aa8.29□□□□□ -1.08
PRDM16-207ENST00000512462 TIMM17BO60830 172 aa8.29□□□□□ -1.08
PRDM16-207ENST00000512462 PDZD2O15018 2839 aa8.28□□□□□ -1.08
PRDM16-207ENST00000512462 LELP1Q5T871 98 aa8.28□□□□□ -1.08
PRDM16-207ENST00000512462 LINC00336Q6ZUF6 198 aa8.28□□□□□ -1.08
PRDM16-207ENST00000512462 DIRC1Q969H9 104 aa8.28□□□□□ -1.08
PRDM16-207ENST00000512462 OXTP01178 125 aa8.28□□□□□ -1.08
PRDM16-207ENST00000512462 C10orf25Q5T742 122 aa8.28□□□□□ -1.08
PRDM16-207ENST00000512462 PRO0628Q9UI54 55 aa8.28□□□□□ -1.08
PRDM16-207ENST00000512462 RPS28P62857 69 aaKnown RBP8.27□□□□□ -1.09
PRDM16-207ENST00000512462 FAM218AQ96MZ4 157 aa8.27□□□□□ -1.09
PRDM16-207ENST00000512462 OTOGQ6ZRI0 2925 aa8.27□□□□□ -1.09
PRDM16-207ENST00000512462 M0R2N4 97 aa8.27□□□□□ -1.09
PRDM16-207ENST00000512462 TRAV23DV6A0A075B6W5 121 aa8.27□□□□□ -1.09
PRDM16-207ENST00000512462 IGLV5-39A0A0G2JS06 123 aa8.27□□□□□ -1.09
PRDM16-207ENST00000512462 ETDCA0A1B0GVM5 59 aa8.27□□□□□ -1.09
PRDM16-207ENST00000512462 CXCL5P42830 114 aa8.27□□□□□ -1.09
PRDM16-207ENST00000512462 CYSTM1Q9H1C7 97 aa8.27□□□□□ -1.09
PRDM16-207ENST00000512462 C19orf73Q9NVV2 129 aa8.27□□□□□ -1.09
PRDM16-207ENST00000512462 COX7CP15954 63 aa8.26□□□□□ -1.09
PRDM16-207ENST00000512462 LITAFQ99732 161 aa8.26□□□□□ -1.09
PRDM16-207ENST00000512462 Q8IZM0 81 aa8.25□□□□□ -1.09
PRDM16-207ENST00000512462 STAB2Q8WWQ8 2551 aa8.25□□□□□ -1.09
PRDM16-207ENST00000512462 PLAC8L1A1L4L8 177 aa8.25□□□□□ -1.09
PRDM16-207ENST00000512462 RBM3P98179 157 aaKnown RBP8.25□□□□□ -1.09
PRDM16-207ENST00000512462 Q5XG85 94 aa8.25□□□□□ -1.09
PRDM16-207ENST00000512462 A0A087WVE0 104 aa8.25□□□□□ -1.09
PRDM16-207ENST00000512462 CSNK1G2-AS1Q8NCQ2 148 aa8.25□□□□□ -1.09
PRDM16-207ENST00000512462 KRTAP24-1Q3LI83 254 aa8.24□□□□□ -1.09
PRDM16-207ENST00000512462 HIGD2AQ9BW72 106 aa8.24□□□□□ -1.09
PRDM16-207ENST00000512462 TRBV10-3A0A0K0K1G6 114 aa8.23□□□□□ -1.09
PRDM16-207ENST00000512462 LYPD5Q6UWN5 251 aa8.23□□□□□ -1.09
PRDM16-207ENST00000512462 TRBV7-7A0A0K0K1E9 115 aa8.23□□□□□ -1.09
PRDM16-207ENST00000512462 SYCNQ0VAF6 134 aa8.23□□□□□ -1.09
PRDM16-207ENST00000512462 COX7BP24311 80 aa8.23□□□□□ -1.09
PRDM16-207ENST00000512462 C1orf195Q5TG92 126 aa8.22□□□□□ -1.09
PRDM16-207ENST00000512462 F8WEM9 126 aa8.22□□□□□ -1.09
PRDM16-207ENST00000512462 C3orf84H3BNL1 204 aa8.22□□□□□ -1.09
PRDM16-207ENST00000512462 BRK1Q8WUW1 75 aa8.21□□□□□ -1.09
PRDM16-207ENST00000512462 IL17DQ8TAD2 202 aa8.21□□□□□ -1.09
PRDM16-207ENST00000512462 TMEM256-PLSCR3K7ERE1 68 aa8.21□□□□□ -1.1
PRDM16-207ENST00000512462 ENHOQ6UWT2 76 aa8.2□□□□□ -1.1
PRDM16-207ENST00000512462 TMEM258P61165 79 aa8.2□□□□□ -1.1
PRDM16-207ENST00000512462 C2orf48Q96LS8 159 aa8.2□□□□□ -1.1
PRDM16-207ENST00000512462 ZNF469Q96JG9 3925 aaPredicted RBP8.2□□□□□ -1.1
PRDM16-207ENST00000512462 GHRHP01286 108 aa8.2□□□□□ -1.1
PRDM16-207ENST00000512462 IGLV5-45A0A087WSX0 123 aa8.19□□□□□ -1.1
PRDM16-207ENST00000512462 CRYGAP11844 174 aa8.19□□□□□ -1.1
PRDM16-207ENST00000512462 LINC00643Q86TS7 51 aa8.19□□□□□ -1.1
PRDM16-207ENST00000512462 ACYP1P07311 99 aa8.19□□□□□ -1.1
PRDM16-207ENST00000512462 FAM104AQ969W3 186 aa8.19□□□□□ -1.1
PRDM16-207ENST00000512462 RPL28P46779 137 aaKnown RBP8.18□□□□□ -1.1
PRDM16-207ENST00000512462 ESRGQ1W209 222 aa8.18□□□□□ -1.1
PRDM16-207ENST00000512462 Q6ZRU5 148 aa8.18□□□□□ -1.1
PRDM16-207ENST00000512462 Q8NAQ8 132 aa8.18□□□□□ -1.1
PRDM16-207ENST00000512462 A0A1B0GUV1 79 aa8.18□□□□□ -1.1
PRDM16-207ENST00000512462 RMI2Q96E14 147 aa8.18□□□□□ -1.1
PRDM16-207ENST00000512462 JMJD7-PLA2G4BH0Y9G9 81 aa8.17□□□□□ -1.1
PRDM16-207ENST00000512462 ATOX1O00244 68 aa8.16□□□□□ -1.1
PRDM16-207ENST00000512462 ZNF73O43830 326 aaPredicted RBP8.16□□□□□ -1.1
PRDM16-207ENST00000512462 IMUPQ9GZP8 106 aa8.15□□□□□ -1.1
PRDM16-207ENST00000512462 TRAV10A0A0B4J240 114 aa8.15□□□□□ -1.11
PRDM16-207ENST00000512462 SMCR5Q8TEV8 140 aa8.15□□□□□ -1.11
PRDM16-207ENST00000512462 NREPQ16612 68 aa8.14□□□□□ -1.11
PRDM16-207ENST00000512462 Q8N814 137 aa8.14□□□□□ -1.11
PRDM16-207ENST00000512462 AKAP9Q99996 3911 aa8.14□□□□□ -1.11
PRDM16-207ENST00000512462 CCKP06307 115 aa8.14□□□□□ -1.11
PRDM16-207ENST00000512462 LINC00846Q9NV44 126 aa8.13□□□□□ -1.11
PRDM16-207ENST00000512462 USP17L23D6RBM5 183 aa8.13□□□□□ -1.11
PRDM16-207ENST00000512462 KRTAP10-11P60412 298 aa8.13□□□□□ -1.11
PRDM16-207ENST00000512462 UPK3BQ9BT76 320 aa8.13□□□□□ -1.11
PRDM16-207ENST00000512462 FAM240AA0A1B0GVK7 77 aa8.12□□□□□ -1.11
PRDM16-207ENST00000512462 C20orf197Q8N268 126 aa8.12□□□□□ -1.11
PRDM16-207ENST00000512462 FAM19A1Q7Z5A9 133 aa8.12□□□□□ -1.11
PRDM16-207ENST00000512462 LINC01561Q8N1V8 128 aa8.12□□□□□ -1.11
PRDM16-207ENST00000512462 C6orf48Q9UBA6 75 aa8.12□□□□□ -1.11
PRDM16-207ENST00000512462 TENM3Q9P273 2699 aa8.12□□□□□ -1.11
PRDM16-207ENST00000512462 FUSP35637 526 aaKnown RBP eCLIP8.1□□□□□ -1.112e-6■■□□□ 11.6
PRDM16-207ENST00000512462 C9orf129Q5T035 196 aaKnown RBP8.09□□□□□ -1.11
PRDM16-207ENST00000512462 UBE2AP49459 152 aa8.09□□□□□ -1.11
PRDM16-207ENST00000512462 COX17Q14061 63 aa8.08□□□□□ -1.12
PRDM16-207ENST00000512462 SERP2Q8N6R1 65 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms